SSBD - SSBD:database - Project list

Projects

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Project

Release, Updated

# of images

# of quantitative data

Organism(s)

Datatype

Paper information

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Project 389-Watabe-PGE2discharge
SSBD:repository:
ssbd-repos-000389

Release, Updated 2026-01-21

# of image datasets 146
size of image datasets 77.0 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Canis lupus familiaris

DataType(s) signal transduction, cell communication

Paper information Watabe T et. al. (2023), Cell Struct Funct
doi: 10.1247/csf.23047
pmid: 37813623

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Project 454-Mizuta-PollenTubeGuidance
SSBD:repository:
ssbd-repos-000454

Release, Updated 2026-01-21

# of image datasets 17
size of image datasets 17.6 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Arabidopsis thaliana

DataType(s) pollen tube guidance

Paper information Mizuta Y et. al. (2024), EMBO Rep 25(6), 2529-49
doi: 10.1038/s44319-024-00151-4
pmid: 38773320

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Project 460-Tanaka-RadialAxisDyn
SSBD:repository:
ssbd-repos-000460

Release, Updated 2026-01-21

# of image datasets 6
size of image datasets 7.6 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Arabidopsis thaliana

DataType(s) zygote elongation, periclinal cell division

Paper information Tanaka S et. al. (2024), Curr Biol
doi: 10.1016/j.cub.2024.08.038
pmid: 39303713

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Project 419-Hagiwara-CollectiveMigrate
SSBD:repository:
ssbd-repos-000419

Release, Updated 2025-12-03

# of image datasets 17
size of image datasets 8.3 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Canis lupus familiaris, Homo sapiens

DataType(s) regulation of cell shape, epithelial cell migration cell-matrix recognition

Paper information Hagiwara M et. al. (2021), Commun Biol 4(1), 808
doi: 10.1038/s42003-021-02350-4
pmid: 34183779

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Project 421-Takenouchi-AgedYoungOocyte
SSBD:repository:
ssbd-repos-000421

Release, Updated 2025-12-03

# of image datasets 468
size of image datasets 624.7 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) , female meiosis chromosome segregation

Paper information Takenouchi O et. al. (2024), Science 385(6706), eadn5529
doi: 10.1126/science.adn5529
pmid: 39024439

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Project 310-Sato-HemocyteMigrate
SSBD:repository:
ssbd-repos-000310

Release, Updated 2025-11-28

# of image datasets 7
size of image datasets 22.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Coturnix japonica

DataType(s) hemocyte migration, embryonic hemopoiesis

Paper information Sato Y et. al. (2023), Development 150(11)
doi: 10.1242/dev.201275
pmid: 37272531

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Project 367-Tsuboi-DrosophilaWing
SSBD:repository:
ssbd-repos-000367

Release, Updated 2025-11-28

# of image datasets 23
size of image datasets 353.0 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Drosophila

DataType(s) pattern specification process, pupal development

Paper information Tsuboi A et. al. (2023), Sci Adv 9(35), eadh2154
doi: 10.1126/sciadv.adh2154
pmid: 37656799

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Project 386-Takahashi-EarIL31RA
SSBD:repository:
ssbd-repos-000386

Release, Updated 2025-11-28

# of image datasets 10
size of image datasets 3.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) axon, nucleus

Paper information Takahashi S et. al. (2023), Cell Rep, 113433
doi: 10.1016/j.celrep.2023.113433
pmid: 38029739

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Project 411-Yoshinari-BorateTransporter
SSBD:repository:
ssbd-repos-000411

Release, Updated 2025-11-28

# of image datasets 11
size of image datasets 397.1 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Arabidopsis thaliana

DataType(s) active borate transmembrane transporter activity

Paper information Yoshinari A et. al. (2024), Plant Cell Physiol
doi: 10.1093/pcp/pcae096
pmid: 39215599

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Project 412-Katoh-BMP4Cilia
SSBD:repository:
ssbd-repos-000412

Release, Updated 2025-11-28

# of image datasets 20
size of image datasets 48.9 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) calcium-mediated signaling

Paper information Katoh TA et. al. (2024), Dev Dyn
doi: 10.1002/dvdy.727
pmid: 38984461

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Project 416-Otomo-descSPIM
SSBD:repository:
ssbd-repos-000416

Release, Updated 2025-11-28

# of image datasets 20
size of image datasets 348.6 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Mus musculus

DataType(s) nucleus, plasma membrane, cytoplasm

Paper information Otomo K et. al. (2024), Nat Commun 15(1), 4941
doi: 10.1038/s41467-024-49131-1
pmid: 38866781

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Project 422-Asai-KinetochoreBeads
SSBD:repository:
ssbd-repos-000422

Release, Updated 2025-11-28

# of image datasets 181
size of image datasets 1.2 TB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) kinetochore assembly, nuclear chromosome segregation, female meiosis chromosome segregation

Paper information Asai K et. al. (2024), Science 385(6715), 1366-1375
doi: 10.1126/science.adn5428
pmid: 39298589

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Project 439-Takayama-dynamicsEGFR
SSBD:repository:
ssbd-repos-000439

Release, Updated 2025-11-28

# of image datasets 8
size of image datasets 506.3 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Cricetulus griseus

DataType(s) intracellular signal transduction, epidermal growth factor receptor activity

Paper information Takayama M et. al. (2024), Biochem Biophys Res Commun 704, 149673
doi: 10.1016/j.bbrc.2024.149673
pmid: 38401305

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Project 451-Hitora-Neopetromin
SSBD:repository:
ssbd-repos-000451

Release, Updated 2025-11-28

# of image datasets 6
size of image datasets 619.2 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Nicotiana tabacum

DataType(s) negative regulation of actin filament polymerization

Paper information Hitora Y et. al. (2024), J Nat Prod
doi: 10.1021/acs.jnatprod.4c00158
pmid: 38503712

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Project 383-Hiromoto-PoralizeDiv
SSBD:repository:
ssbd-repos-000383

Release, Updated 2025-11-26

# of image datasets 24
size of image datasets 8.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Arabidopsis thaliana

DataType(s) cellular component organization, zygote asymmetric cell division

Paper information Hiromoto Y et. al. (2023), Sci Rep 13(1), 22879
doi: 10.1038/s41598-023-50020-8
pmid: 38129559

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Project 387-Ando-StayGold
SSBD:repository:
ssbd-repos-000387

Release, Updated 2025-11-26

# of image datasets 31
size of image datasets 153.6 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Chlorocebus pygerythrus, Homo sapiens

DataType(s) regulate the chromosome assembly and segregation

Paper information Ando R et. al. (2023), Nat Methods
doi: 10.1038/s41592-023-02085-6
pmid: 38036853

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Project 388-Okuno-CFinput
SSBD:repository:
ssbd-repos-000388

Release, Updated 2025-11-26

# of image datasets 85
size of image datasets 7.0 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) nervous system development

Paper information Okuno Y et. al. (2023), Front Mol Neurosci 16, 1206245
doi: 10.3389/fnmol.2023.1206245
pmid: 37426069

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Project 393-Fujimoto-CoV2Infect
SSBD:repository:
ssbd-repos-000393

Release, Updated 2025-11-26

# of image datasets 9
size of image datasets 2.0 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) viral process

Paper information Fujimoto K et. al. (2024), Lab Chip
doi: 10.1039/d3lc00768e
pmid: 38252025

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Project 408-Sarper-TentacleArrange
SSBD:repository:
ssbd-repos-000408

Release, Updated 2025-11-26

# of image datasets 11
size of image datasets 263.0 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Coryne uchidai

DataType(s) anatomical structure formation involved in morphogenesis, growth

Paper information Sarper SE et. al. (2023), Front Cell Dev Biol 11, 1284904
doi: 10.3389/fcell.2023.1284904
pmid: 38078002

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Project 409-Ichimura-AMATERAS
SSBD:repository:
ssbd-repos-000409

Release, Updated 2025-11-26

# of image datasets 7
size of image datasets 633.7 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Coturnix japonica, Mus musculus, Homo sapiens

DataType(s) cell migration, embryo development

Paper information Ichimura T et. al. (2025), Elife 13
doi: 10.7554/eLife.93633
pmid: 39899352

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Project 333-Tsugawa-gravitropism
SSBD:repository:
ssbd-repos-000333

Release, Updated 2025-04-21

# of image datasets 22
size of image datasets 1.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Arabidopsis thaliana

DataType(s) gravitropism

Paper information Tsugawa S et. al. (2023), Sci Rep 13(1), 11165
doi: 10.1038/s41598-023-38069-x
pmid: 37460700

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Project 379-Okubo-bilaminoid
SSBD:repository:
ssbd-repos-000379

Release, Updated 2025-04-21

# of image datasets 8
size of image datasets 1.9 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) embryo development

Paper information Okubo T et. al. (2023), Nature
doi: 10.1038/s41586-023-06871-2
pmid: 38052228

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Project 292-Katsuta-StressFiber
SSBD:repository:
ssbd-repos-000292

Release, Updated 2025-04-10

# of image datasets 125
size of image datasets 20.9 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) actin filament binding

Paper information Katsuta H et. al. (2023), iScience 26(3), 106090
doi: 10.1016/j.isci.2023.106090
pmid: 36852278

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Project 320-Spratt-dMetRaman
SSBD:repository:
ssbd-repos-000320

Release, Updated 2025-04-10

# of image datasets 20
size of image datasets 31.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Drosophila

DataType(s) lysosome

Paper information Spratt SJ et. al. (2023), Front Chem 11, 1141920
doi: 10.3389/fchem.2023.1141920
pmid: 37065821

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Project 368-Yabushita-Decitabine
SSBD:repository:
ssbd-repos-000368

Release, Updated 2025-04-10

# of image datasets 22
size of image datasets 26.6 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cell cycle, cell division

Paper information Yabushita T et. al. (2023), Cell Rep, 113098
doi: 10.1016/j.celrep.2023.113098
pmid: 37714156

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Project 373-Tomioka-CaImage
SSBD:repository:
ssbd-repos-000373

Release, Updated 2025-04-10

# of image datasets 39
size of image datasets 4.7 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Caenorhabditis elegans

DataType(s) response to chemical

Paper information Tomioka M et. al. (2023), PLoS Genet 19(9), e1010637
doi: 10.1371/journal.pgen.1010637
pmid: 37669262

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Project 284-Mashiko-EmbryoDyn
SSBD:repository:
ssbd-repos-000284

Release, Updated 2025-03-28

# of image datasets 174
size of image datasets 2.2 TB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) mitotic cell cycle, embryo development, protein localisation

Paper information Mashiko D et. al. (2022), Sci Rep 12(1), 9411
doi: 10.1038/s41598-022-13646-8
pmid: 35672442

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Project 232-Tany-SignalingDyn
SSBD:repository:
ssbd-repos-000232

Release, Updated 2025-02-17

# of image datasets 184
size of image datasets 9.8 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) G protein-coupled serotonin receptor activity, coupled via Gs, coupled via Gi/Go, dopamine neurotransmitter receptor activity

Paper information Tany R et. al. (2022), Biochem J 479(8), 883-900
doi: 10.1042/BCJ20220021
pmid: 35383830

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Project 398-Hirashima-LungMorpho
SSBD:repository:
ssbd-repos-000398

Release, Updated 2025-02-13

# of image datasets 17
size of image datasets 14.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) structural constituent of cytoskeleton

Paper information Hirashima T and Matsuda M (2024), Curr Biol
doi: 10.1016/j.cub.2023.12.049
pmid: 38228149

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Project 327-Okuzumi-synuclein
SSBD:repository:
ssbd-repos-000327

Release, Updated 2025-01-31

# of image datasets 32
size of image datasets 462.2 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) inclusion body assembly

Paper information Okuzumi A et. al. (2023), Nat Med
doi: 10.1038/s41591-023-02358-9
pmid: 37248302

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Project 329-Nelson-Chemotaxis
SSBD:repository:
ssbd-repos-000329

Release, Updated 2025-01-31

# of image datasets 33
size of image datasets 463.9 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Chlamydomonas reinhardtii

DataType(s) cell chemotaxis

Paper information Nelson G et. al. (2023), Sci Rep 13(1), 10781
doi: 10.1038/s41598-023-36818-6
pmid: 37402785

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Project 369-Moriyama-deuterateRaman
SSBD:repository:
ssbd-repos-000369

Release, Updated 2025-01-31

# of image datasets 3
size of image datasets 152.3 KB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) mitochondrion

Paper information Moriyama S et. al. (2023), Chem Commun (Camb)
doi: 10.1039/d3cc04410f
pmid: 37721453

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Project 371-Liao-RamanSpectra
SSBD:repository:
ssbd-repos-000371

Release, Updated 2025-01-31

# of image datasets 2
size of image datasets 1.3 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) -

Paper information Liao HX et. al. (2023), Anal Chem
doi: 10.1021/acs.analchem.3c02129
pmid: 37725051

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Project 377-Ichinose-RedAlgae
SSBD:repository:
ssbd-repos-000377

Release, Updated 2025-01-31

# of image datasets 1
size of image datasets 930.3 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Cyanidioschyzon merolae

DataType(s) tubulin binding

Paper information Ichinose TM and Iwane AH (2021), Protoplasma 258(3), 651-660
doi: 10.1007/s00709-020-01592-z
pmid: 33580410

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Project 385-Yamakoshi-thiaMichael
SSBD:repository:
ssbd-repos-000385

Release, Updated 2025-01-31

# of image datasets 6
size of image datasets 1.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) -

Paper information Yamakoshi H et. al. (2023), Chem Commun (Camb)
doi: 10.1039/d3cc05015g
pmid: 37986604

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Project 394-Fukute-DNAunderwind
SSBD:repository:
ssbd-repos-000394

Release, Updated 2025-01-31

# of image datasets 14
size of image datasets 8.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) nucleus

Paper information Fukute J et. al. (2024), Commun Biol 7(1), 83
doi: 10.1038/s42003-023-05750-w
pmid: 38263258

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Project 366-Ebata-TERTlocalize
SSBD:repository:
ssbd-repos-000366

Release, Updated 2024-12-24

# of image datasets 6
size of image datasets 1.9 TB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) telomerase activity

Paper information Ebata H et. al. (2023), FEBS Open Bio
doi: 10.1002/2211-5463.13682
pmid: 37525387

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Project 317-Narita-Argonaute2Aggrigate
SSBD:repository:
ssbd-repos-000317

Release, Updated 2024-12-23

# of image datasets 52
size of image datasets 50.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Drosophila

DataType(s) protein-containing complex assembly

Paper information Narita H et. al. (2023), BMC Biol 21(1), 78
doi: 10.1186/s12915-023-01569-3
pmid: 37072852

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Project 378-Minegishi-MetastaticNiche
SSBD:repository:
ssbd-repos-000378

Release, Updated 2024-12-23

# of image datasets 3
size of image datasets 1.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) cell-cell interaction

Paper information Minegishi M et. al. (2023), Nat Commun 14(1), 8031
doi: 10.1038/s41467-023-43855-2
pmid: 38052804

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Project 191-Shima-KIF5Cmove
SSBD:repository:
ssbd-repos-000191

Release, Updated 2024-12-14

# of image datasets 6
size of image datasets 1.6 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) -

DataType(s) microtubule motor activity

Paper information Shima T et. al. (2018), J Cell Biol 217(12), 4164-4183
doi: 10.1083/jcb.201711178
pmid: 30297389

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Project 280-Uyama-RetinaGraft
SSBD:repository:
ssbd-repos-000280

Release, Updated 2024-12-14

# of image datasets 22
size of image datasets 128.5 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Macaca fascicularis

DataType(s) retina homeostasis

Paper information Uyama H et. al. (2022), Stem Cell Reports
doi: 10.1016/j.stemcr.2022.09.014
pmid: 36306783

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Project 285-Tanaka-Covid19Infection
SSBD:repository:
ssbd-repos-000285

Release, Updated 2024-12-14

# of image datasets 16
size of image datasets 61.1 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) viral process

Paper information Tanaka J et. al. (2022), Nat Cell Biol
doi: 10.1038/s41556-022-01007-6
pmid: 36253535

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Project 293-Kimata-PlantInhibit
SSBD:repository:
ssbd-repos-000293

Release, Updated 2024-12-14

# of image datasets 24
size of image datasets 13.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Arabidopsis thaliana, Nicotiana tabacum, Physcomitrium patens

DataType(s) cytoskeleton organization, cell division

Paper information Kimata Y et. al. (2023), Life Sci Alliance 6(5)
doi: 10.26508/lsa.202201657
pmid: 36849250

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Project 299-Satoh-Endosome
SSBD:repository:
ssbd-repos-000299

Release, Updated 2024-12-14

# of image datasets 14
size of image datasets 1.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) endosomal lumen acidification, epidermal growth factor receptor signaling pathway, organelle assembly

Paper information Satoh AO et. al. (2023), Cell Rep 42(3), 112229
doi: 10.1016/j.celrep.2023.112229
pmid: 36906852

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Project 306-Kamei-microglia
SSBD:repository:
ssbd-repos-000306

Release, Updated 2024-12-14

# of image datasets 20
size of image datasets 70.0 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) engulfment, phagocytosis

Paper information Kamei R and Okabe S (2023), Glia
doi: 10.1002/glia.24379
pmid: 37102766

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Project 318-Yamamoto-StemCell
SSBD:repository:
ssbd-repos-000318

Release, Updated 2024-12-14

# of image datasets 8
size of image datasets 73.7 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cell population proliferation

Paper information Yamamoto T et. al. (2023), Stem Cells Transl Med 12(3), 169-182
doi: 10.1093/stcltm/szad005
pmid: 36917628

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Project 324-Kimata-ZygoticMito
SSBD:repository:
ssbd-repos-000324

Release, Updated 2024-12-14

# of image datasets 4
size of image datasets 15.7 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Arabidopsis thaliana

DataType(s) mitochondrion distribution, zygote asymmetric cell division

Paper information Kimata Y et. al. (2020), Quant Plant Biol 1, e3
doi: 10.1017/qpb.2020.4
pmid: 37077329

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Project 332-Miyabara-tumor
SSBD:repository:
ssbd-repos-000332

Release, Updated 2024-12-14

# of image datasets 2
size of image datasets 19.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) detection of hypoxia

Paper information Miyabara H et. al. (2023), Cancer Sci
doi: 10.1111/cas.15907
pmid: 37482942

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Project 337-Isoe-BrainRegion
SSBD:repository:
ssbd-repos-000337

Release, Updated 2024-12-14

# of image datasets 89
size of image datasets 12.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Oryzias latipes

DataType(s) neurogenesis, neuron migration

Paper information Isoe Y et. al. (2023), Elife 12
doi: 10.7554/eLife.85093
pmid: 37489039

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Project 339-Tsukita-Cobl
SSBD:repository:
ssbd-repos-000339

Release, Updated 2024-12-14

# of image datasets 42
size of image datasets 3.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Mus musculus

DataType(s) molecular condensate scaffold activity

Paper information Tsukita K et. al. (2023), Sci Adv 9(7), eadf6358
doi: 10.1126/sciadv.adf6358
pmid: 36791197

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Project 344-Murata-InfectHeart
SSBD:repository:
ssbd-repos-000344

Release, Updated 2024-12-14

# of image datasets 10
size of image datasets 665.3 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cardiac muscle contraction, viral process

Paper information Murata K et. al. (2024), iScience 27(1), 108641
doi: 10.1016/j.isci.2023.108641
pmid: 38299028

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Project 380-Wang-ActininTensionSensor
SSBD:repository:
ssbd-repos-000380

Release, Updated 2024-12-14

# of image datasets 3
size of image datasets 3.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) response to chemical, response to osmotic stress

Paper information Wang J et. al. (2023), Sci Rep 13(1), 22729
doi: 10.1038/s41598-023-50142-z
pmid: 38123655

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Project 139-Kishimoto-TracheaDev
SSBD:repository:
ssbd-repos-000139

Release, Updated 2024-11-25

# of image datasets 85
size of image datasets 5.3 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) branching morphogenesis of an epithelial tube

Paper information Kishimoto K et. al. (2018), Nat Commun 9(1), 2816
doi: 10.1038/s41467-018-05189-2
pmid: 30026494

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Project 273-Kaise-NeuralStemCell
SSBD:repository:
ssbd-repos-000273

Release, Updated 2024-11-25

# of image datasets 2
size of image datasets 242.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) stem cell differentiation, neurogenesis

Paper information Kaise T et. al. (2022), Genes Dev 36(1-2), 23-37
doi: 10.1101/gad.349000.121
pmid: 34916302

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Project 276-Murai-CellularDyn
SSBD:repository:
ssbd-repos-000276

Release, Updated 2024-11-25

# of image datasets 23
size of image datasets 276.1 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) execution phase of necroptosis, necroptotic process, execution phase of apoptosis, apoptotic process

Paper information Murai S et. al. (2022), Commun Biol 5(1), 1331
doi: 10.1038/s42003-022-04300-0
pmid: 36471162

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Project 282-Ohgushi-StemCell
SSBD:repository:
ssbd-repos-000282

Release, Updated 2024-11-25

# of image datasets 4
size of image datasets 2.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cell division, morphogenesis of an epithelium, stem cell differentiation, syncytium formation

Paper information Ohgushi M et. al. (2022), Cell Rep 39(12), 110973
doi: 10.1016/j.celrep.2022.110973
pmid: 35732132

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Project 300-Nishiyama-Rdot
SSBD:repository:
ssbd-repos-000300

Release, Updated 2024-11-25

# of image datasets 1
size of image datasets 635.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) -

Paper information Nishiyama R et. al. (2023), PNAS Nexus 2(2)
doi: 10.1093/pnasnexus/pgad001
pmid: 36845353

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Project 305-Mochizuki-multilineRaman
SSBD:repository:
ssbd-repos-000305

Release, Updated 2024-11-25

# of image datasets 8
size of image datasets 1.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Mus musculus

DataType(s) -

Paper information Mochizuki K et. al. (2023), Biomed Opt Express 14(3), 1015-1026
doi: 10.1364/BOE.480611
pmid: 36950233

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Project 309-Fujioka-RamanProbe
SSBD:repository:
ssbd-repos-000309

Release, Updated 2024-11-25

# of image datasets 16
size of image datasets 84.9 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Drosophila, Homo sapiens

DataType(s) beta-galactosidase activity

Paper information Fujioka H et. al. (2023), J Am Chem Soc
doi: 10.1021/jacs.2c12381
pmid: 37057960

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Project 313-Kawano-WormSleep
SSBD:repository:
ssbd-repos-000313

Release, Updated 2024-11-25

# of image datasets 1
size of image datasets 3.6 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Caenorhabditis elegans

DataType(s) sleep

Paper information Kawano T et. al. (2023), Cell Rep 42(3), 112267
doi: 10.1016/j.celrep.2023.112267
pmid: 36924492

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Project 316-Ando-CellCycle
SSBD:repository:
ssbd-repos-000316

Release, Updated 2024-11-25

# of image datasets 2
size of image datasets 505.9 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cell cycle phase transition

Paper information Ando R et. al. (2023), Cell Struct Funct
doi: 10.1247/csf.23028
pmid: 37394513

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Project 319-Shou-RESORT
SSBD:repository:
ssbd-repos-000319

Release, Updated 2024-11-25

# of image datasets 11
size of image datasets 11.5 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Drosophila, Homo sapiens

DataType(s) mitochondrion

Paper information Shou J et. al. (2023), Sci Adv 9(24), eade9118
doi: 10.1126/sciadv.ade9118
pmid: 37327330

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Project 322-Ikari-membraneRas
SSBD:repository:
ssbd-repos-000322

Release, Updated 2024-11-25

# of image datasets 8
size of image datasets 27.6 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) protein targeting

Paper information Ikari M et. al. (2023), JACS Au 3(6), 1658-1669
doi: 10.1021/jacsau.3c00108
pmid: 37388687

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Project 323-Kang-ZygoteElongate
SSBD:repository:
ssbd-repos-000323

Release, Updated 2024-11-25

# of image datasets 2
size of image datasets 2.9 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Arabidopsis thaliana

DataType(s) zygote elongation

Paper information Kang Z et. al. (2023), Plant Cell Physiol
doi: 10.1093/pcp/pcad020
pmid: 36943754

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Project 334-Hashimoto-SARSorganoid
SSBD:repository:
ssbd-repos-000334

Release, Updated 2024-11-25

# of image datasets 8
size of image datasets 37.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) regulation of autophagy, viral process

Paper information Hashimoto R et. al. (2023), Mol Pharm 20(4), 2276-87
doi: 10.1021/acs.molpharmaceut.3c00114
pmid: 36946991

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Project 255-Koganezawa-CellDyn
SSBD:repository:
ssbd-repos-000255

Release, Updated 2024-01-23

# of image datasets 414
size of image datasets 3.1 TB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Escherichia coli

DataType(s) cell growth, cell division, response to xenobiotic stimulus

Paper information Koganezawa Y et. al. (2022), Elife 11
doi: 10.7554/eLife.74486
pmid: 35535492

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Project 331-Shimojo-MouseBrainAnatomicalRegion
SSBD:repository:
ssbd-repos-000331

Release, Updated 2023-12-24

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 84
size of quantitative datasets 52.4 GB

Organism(s) Mus musculus

DataType(s) nervous system development

Paper information Shimojo,Yuki et. al. (2024), IPSJ Transactions on Bioinformatics 17(), 33-39
doi: 10.2197/ipsjtbio.17.33

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Project 268-Oishi-VesselClassification
SSBD:repository:
ssbd-repos-000268

Release, Updated 2023-09-01

# of image datasets 21
size of image datasets 8.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) laminin binding

Paper information Oishi M et. al. (2022), Glia
doi: 10.1002/glia.24273
pmid: 36165697

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Project 277-Matsuura-Suzuki-CryoEM
SSBD:repository:
ssbd-repos-000277

Release, Updated 2023-08-30

# of image datasets 2
size of image datasets 1.1 TB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) ribosome

Paper information Matsuura-Suzuki E et. al. (2022), Elife 11
doi: 10.7554/eLife.72780
pmid: 35674491

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Project 254-Seita-GrowthDyn
SSBD:repository:
ssbd-repos-000254

Release, Updated 2023-08-29

# of image datasets 146
size of image datasets 248.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) cell division, growth

Paper information Seita A et. al. (2021), PLoS One 16(2), e0236534
doi: 10.1371/journal.pone.0236534
pmid: 33524064

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Project 272-Yoshida-EGFRSignalingDyn
SSBD:repository:
ssbd-repos-000272

Release, Updated 2023-08-29

# of image datasets 28
size of image datasets 73.6 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Drosophila melanogaster

DataType(s) MAP kinase activity, epidermal growth factor receptor activity

Paper information Yoshida K and Hayashi S (2023), Development 150(5)
doi: 10.1242/dev.201231
pmid: 36897356

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Project 267-Sugiura-CellDyn
SSBD:repository:
ssbd-repos-000267

Release, Updated 2023-07-20

# of image datasets 1
size of image datasets 202.7 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) -

Paper information Sugiura K and Nagai T (2022), Commun Biol 5
doi: 10.1038/s42003-022-04153-7
pmid: 36329112

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Project 269-Wang-CellPhysicalDyn
SSBD:repository:
ssbd-repos-000269

Release, Updated 2023-07-20

# of image datasets 33
size of image datasets 227.1 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Mus musculus

DataType(s) cell surface

Paper information Wang D et. al. (2022), Biomaterials 280, 121256
doi: 10.1016/j.biomaterials.2021.121256
pmid: 34794825

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Project 275-Sasaki-HistonDyn
SSBD:repository:
ssbd-repos-000275

Release, Updated 2023-07-20,
2023-08-02 (errata)

# of image datasets 13
size of image datasets 1.3 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Chlorocebus pygerythrus, Homo sapiens, Mus musculus

DataType(s) H3K9me3 modified histone binding

Paper information Sasaki K et. al. (2022), Cell Chem Biol 29(7), 1153-1161.e5
doi: 10.1016/j.chembiol.2022.05.006
pmid: 35728598

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Project 279-Suzuki-CaspaseActivity
SSBD:repository:
ssbd-repos-000279

Release, Updated 2023-07-20

# of image datasets 14
size of image datasets 5.6 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cysteine-type endopeptidase activity involved in apoptotic process, cysteine-type endopeptidase activity

Paper information Suzuki M et. al. (2022), Sci Rep 12(1), 21160
doi: 10.1038/s41598-022-25286-z
pmid: 36476686

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Project 283-Kanadome-CellAdhesion
SSBD:repository:
ssbd-repos-000283

Release, Updated 2023-07-20

# of image datasets 2
size of image datasets 28.6 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) cell-cell adhesion mediator activity, cadherin binding involved in cell-cell adhesion

Paper information Kanadome T et. al. (2022), Commun Biol 5(1), 1065
doi: 10.1038/s42003-022-04023-2
pmid: 36207396

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Project 291-Deguchi-SARS-CoV2
SSBD:repository:
ssbd-repos-000291

Release, Updated 2023-07-20

# of image datasets 8
size of image datasets 5.9 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) viral gene expression, cellular response to virus

Paper information Deguchi S et. al. (2023), PNAS Nexus 2(3), pgad029
doi: 10.1093/pnasnexus/pgad029
pmid: 36896132

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Project 294-Asamitsu-DNAPTP6Dyn
SSBD:repository:
ssbd-repos-000294

Release, Updated 2023-07-20

# of image datasets 5
size of image datasets 1.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) ribonucleoprotein complex binding

Paper information Asamitsu S et. al. (2023), Sci Adv 9(8), eade2035
doi: 10.1126/sciadv.ade2035
pmid: 36827365

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Project 295-Katoh-CiliumDyn
SSBD:repository:
ssbd-repos-000295

Release, Updated 2023-07-20

# of image datasets 18
size of image datasets 19.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) calcium-mediated signaling, determination of left/right symmetry, detection of nodal flow

Paper information Katoh TA et. al. (2023), Science 379(6627), 66-71
doi: 10.1126/science.abq8148
pmid: 36603091

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Project 274-Aini-MitochondrialDyn
SSBD:repository:
ssbd-repos-000274

Release, Updated 2023-05-29

# of image datasets 34
size of image datasets 179.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Oryza sativa temperate japonica subgroup

DataType(s) mitochondrion distribution

Paper information Aini H et. al. (2022), Plant Reprod 35(1), 47-60
doi: 10.1007/s00497-021-00430-3
pmid: 34633536

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Project 214-Arata-BehavioralActivity
SSBD:repository:
ssbd-repos-000214

Release, Updated 2023-05-11

# of image datasets 5
size of image datasets 34.9 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Caenorhabditis elegans

DataType(s) behavior

Paper information Arata Y et. al. (2022), Sci Rep 12(1), 10481
doi: 10.1038/s41598-022-13022-6
pmid: 35729173

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Project 246-Hung-CircadianRhythm
SSBD:repository:
ssbd-repos-000246

Release, Updated 2023-05-11

# of image datasets 4
size of image datasets 157.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) circadian sleep/wake cycle, circadian rhythm, wakefulness

Paper information Hung CJ et. al. (2021), Front Neurosci 15, 808754
doi: 10.3389/fnins.2021.808754
pmid: 35250437

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Project 258-Oginuma-EmbryoDev
SSBD:repository:
ssbd-repos-000258

Release, Updated 2023-05-11

# of image datasets 1
size of image datasets 50.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Nothobranchius furzeri

DataType(s) CRISPR-cas system

Paper information Oginuma M et. al. (2022), Sci Rep 12(1), 11628
doi: 10.1038/s41598-022-15972-3
pmid: 35804091

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Project 271-Tanaka-FilamentDev
SSBD:repository:
ssbd-repos-000271

Release, Updated 2023-05-11,
2023-05-29 (errata)

# of image datasets 3
size of image datasets 1.7 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) stamen filament development

Paper information Tanaka A et. al. (2022), PLoS Biol 20(9), e3001780
doi: 10.1371/journal.pbio.3001780
pmid: 36067153

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Project 281-Kogure-EmbryoDev
SSBD:repository:
ssbd-repos-000281

Release, Updated 2023-05-11

# of image datasets 1
size of image datasets 470.3 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Ciona robusta

DataType(s) embryo development

Paper information Kogure YS et. al. (2022), Development 149(21)
doi: 10.1242/dev.200215
pmid: 36227591

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Project 296-Kawabata-MouseBrainShape
SSBD:repository:
ssbd-repos-000296

Release, Updated 2023-05-09,
2023-05-29 (errata)

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 168
size of quantitative datasets 100.2 GB

Organism(s) Mus musculus

DataType(s) nervous system development

Paper information Kawabata, Hiroto et. al. (2023), 1-7
doi: https://doi.org/10.1145/3620679.3620680

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Project 257-Kubota-ERKActivity
SSBD:repository:
ssbd-repos-000257

Release, Updated 2023-03-22

# of image datasets 3
size of image datasets 141.6 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) MAP kinase activity

Paper information Kubota Y et. al. (2022), Nat Commun 13(1), 4063
doi: 10.1038/s41467-022-31690-w
pmid: 35831322

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Project 259-Lu-TemperatureDyn
SSBD:repository:
ssbd-repos-000259

Release, Updated 2023-03-22

# of image datasets 5
size of image datasets 3.8 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) heat dissipation, cellular response to temperature stimulus

Paper information Lu K et. al. (2022), Nano Lett 22(14), 5698-5707
doi: 10.1021/acs.nanolett.2c00608
pmid: 35792763

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Project 219-Konishi-CalciumIonDyn
SSBD:repository:
ssbd-repos-000219

Release, Updated 2023-02-21

# of image datasets 170
size of image datasets 81.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Canis lupus familiaris, Mus musculus

DataType(s) G protein-coupled receptor binding

Paper information Konishi Y et. al. (2021), Cancer Res 81(15), 4124-4132
doi: 10.1158/0008-5472.CAN-20-4245
pmid: 34035084

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Project 220-Imanishi-ROCKActivity
SSBD:repository:
ssbd-repos-000220

Release, Updated 2023-02-16

# of image datasets 134
size of image datasets 17.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) Rho-dependent protein serine/threonine kinase activity

Paper information Imanishi A et. al. (2021), Am J Pathol 191(1), 194-203
doi: 10.1016/j.ajpath.2020.09.012
pmid: 33069718

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Project 237-Jin-CellDynamics
SSBD:repository:
ssbd-repos-000237

Release, Updated 2023-02-16

# of image datasets 1354
size of image datasets 784.8 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) -

Paper information Jin J et. al. (2023), Proc Natl Acad Sci U S A 120(1), e2210283120
doi: 10.1073/pnas.2210283120
pmid: 36577074

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Project 244-Tokuoka-Embryogenesis
SSBD:repository:
ssbd-repos-000244

Release, Updated 2023-02-02

# of image datasets 2
size of image datasets 250.8 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) embryo development

Paper information Tokuoka Y et. al. (2020), NPJ Syst Biol Appl 6(1), 32
doi: 10.1038/s41540-020-00152-8
pmid: 33082352

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Project 245-Hirasawa-OR-PAM
SSBD:repository:
ssbd-repos-000245

Release, Updated 2022-12-13

# of image datasets 5
size of image datasets 14.8 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) -

Paper information Hirasawa T et. al. (2022), Photoacoustics 26, 100364
doi: 10.1016/j.pacs.2022.100364
pmid: 35574189

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Project 247-Adhitama-Embryogenesis
SSBD:repository:
ssbd-repos-000247

Release, Updated 2022-12-13

# of image datasets 4
size of image datasets 75.2 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Daphnia magna

DataType(s) embryo development

Paper information Adhitama N et. al. (2020), PLoS One 15(10), e0239893
doi: 10.1371/journal.pone.0239893
pmid: 33035251

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Project 253-Shimauchi-CalciumIonDyn
SSBD:repository:
ssbd-repos-000253

Release, Updated 2022-11-30

# of image datasets 13
size of image datasets 575.5 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) response to calcium ion

Paper information Shimauchi T et. al. (2022), Cells 11(13)
doi: 10.3390/cells11132041
pmid: 35805125

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Project 231-Asakura-ERKactivation
SSBD:repository:
ssbd-repos-000231

Release, Updated 2022-11-25

# of image datasets 1
size of image datasets 179.5 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Canis lupus familiaris

DataType(s) MAP kinase activity

Paper information Asakura Y et. al. (2021), Sci Rep 11(1), 4069
doi: 10.1038/s41598-021-83396-6
pmid: 33603023

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Project 163-Wang-MitochondrialDyn
SSBD:repository:
ssbd-repos-000163

Release, Updated 2022-11-23

# of image datasets 10
size of image datasets 388.7 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) mitochondrial fusion

Paper information Wang C et. al. (2019), Proc Natl Acad Sci U S A 116(32), 15817-15822
doi: 10.1073/pnas.1905924116
pmid: 31337683

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Project 186-Tsuboi-TumorDyn
SSBD:repository:
ssbd-repos-000186

Release, Updated 2022-11-23

# of image datasets 29
size of image datasets 86.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Mus musculus

DataType(s) apoptosis

Paper information Tsuboi S and Jin T (2020), RSC Adv 10(63), 38244-38250
doi: 10.1039/d0ra06495e
pmid: 35517522

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Project 187-Tsuboi-TumorDyn
SSBD:repository:
ssbd-repos-000187

Release, Updated 2022-11-23

# of image datasets 5
size of image datasets 26.1 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Mus musculus

DataType(s) tumor suppressor

Paper information Tsuboi S and Jin T (2020), RSC Adv 10(47), 28171-28179
doi: 10.1039/d0ra04710d
pmid: 35519107

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Project 197-Bannai-CalciumIonSignaling
SSBD:repository:
ssbd-repos-000197

Release, Updated 2022-11-23,
2023-02-16 (errata)

# of image datasets 7
size of image datasets 894.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Mus musculus, Rattus norvegicus

DataType(s) calcium ion signaling

Paper information Bannai H et. al. (2019), J Vis Exp(145)
doi: 10.3791/59246
pmid: 30958464

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Project 199-Ichimura-MulticellularDyn
SSBD:repository:
ssbd-repos-000199

Release, Updated 2022-11-23

# of image datasets 7
size of image datasets 527.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Dictyostelium discoideum, Homo sapiens, Canis lupus familiaris, Mus musculus

DataType(s) calcium-mediated signaling, cAMP-mediated signaling

Paper information Ichimura T et. al. (2021), Sci Rep 11(1), 16539
doi: 10.1038/s41598-021-95930-7
pmid: 34400683 Ichimura, T. et. al. (2021/01/01), 2020.06.29.179044
doi: 10.1101/2020.06.29.179044

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Project 209-Kimura-SkinMorphology
SSBD:repository:
ssbd-repos-000209

Release, Updated 2022-11-23

# of image datasets 2
size of image datasets 1.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) skin epidermis development

Paper information Kimura S et. al. (2020), Commun Biol 3(1), 637
doi: 10.1038/s42003-020-01365-7
pmid: 33127987

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Project 210-Takeo-HFregeneration
SSBD:repository:
ssbd-repos-000210

Release, Updated 2022-11-23

# of image datasets 8
size of image datasets 377.2 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) hair follicle development

Paper information Takeo M et. al. (2021), Sci Rep 11(1), 1173
doi: 10.1038/s41598-020-80624-3
pmid: 33568688

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Project 218-Tanaka-CellSignallingDyn
SSBD:repository:
ssbd-repos-000218

Release, Updated 2022-11-23

# of image datasets 32
size of image datasets 5.6 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) interferon-gamma binding, IFN binding

Paper information Tanaka T et. al. (2021), Cell Struct Funct 46(2), 103-111
doi: 10.1247/csf.21052
pmid: 34744115

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Project 222-Dodo-RamanImaging
SSBD:repository:
ssbd-repos-000222

Release, Updated 2022-11-23

# of image datasets 12
size of image datasets 4.6 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) metabolic process

Paper information Dodo K et. al. (2021), Chem Commun (Camb) 57(17), 2180-2183
doi: 10.1039/d0cc07824g
pmid: 33527102

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Project 224-Kamada-MitosisDyn
SSBD:repository:
ssbd-repos-000224

Release, Updated 2022-11-23

# of image datasets 8
size of image datasets 7.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Nicotiana tabacum

DataType(s) cell division, mitotic cell cycle

Paper information Kamada T et. al. (2022), Sci Rep 12(1), 809
doi: 10.1038/s41598-021-04543-7
pmid: 35039530

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Project 225-Seiriki-WholeBrainDev
SSBD:repository:
ssbd-repos-000225

Release, Updated 2022-11-23

# of image datasets 415
size of image datasets 3.2 TB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) brain development

Paper information Seiriki K et. al. (2019), Nat Protoc 14(5), 1509-1529
doi: 10.1038/s41596-019-0148-4
pmid: 30962606

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Project 226-Matsumura-WholeBrainDev
SSBD:repository:
ssbd-repos-000226

Release, Updated 2022-11-23

# of image datasets 490
size of image datasets 2.2 TB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) brain development

Paper information Matsumura K et. al. (2020), Nat Commun 11
doi: 10.1038/s41467-020-14697-z
pmid: 32103003

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Project 227-Egoshi-RamanImaging
SSBD:repository:
ssbd-repos-000227

Release, Updated 2022-11-23

# of image datasets 20
size of image datasets 3.7 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) -

Paper information Egoshi S et. al. (2021), Org Biomol Chem 19(38), 8232-8236
doi: 10.1039/d1ob01479j
pmid: 34528645

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Project 228-Kanadome-CellInteration
SSBD:repository:
ssbd-repos-000228

Release, Updated 2022-11-23

# of image datasets 8
size of image datasets 1.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) homophilic cell adhesion via plasma membrane adhesion molecules

Paper information Kanadome T et. al. (2021), Sci Rep 11(1), 22237
doi: 10.1038/s41598-021-01481-2
pmid: 34782670

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Project 229-Yamada-GeneExpression
SSBD:repository:
ssbd-repos-000229

Release, Updated 2022-11-23

# of image datasets 4
size of image datasets 1.8 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Mus musculus

DataType(s) translation activator activity

Paper information Yamada M et. al. (2020), iScience 23(9), 101506
doi: 10.1016/j.isci.2020.101506
pmid: 32919371

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Project 233-Nishiyama-CellDyn
SSBD:repository:
ssbd-repos-000233

Release, Updated 2022-11-23

# of image datasets 41
size of image datasets 90.9 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) G protein-coupled receptor kinase activity

Paper information Nishiyama K et. al. (2022), Sci Signal 15(716), eabj0644
doi: 10.1126/scisignal.abj0644
pmid: 35015570

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Project 234-Kobayashi-ChemotaxisDyn
SSBD:repository:
ssbd-repos-000234

Release, Updated 2022-11-23

# of image datasets 6
size of image datasets 3.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Notocomplana humilis

DataType(s) chemotaxis

Paper information Kobayashi A et. al. (2022), Sci Adv 8(9), eabk0331
doi: 10.1126/sciadv.abk0331
pmid: 35245108

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Project 235-Hattori-SmartphoneBioImaging
SSBD:repository:
ssbd-repos-000235

Release, Updated 2022-11-23

# of image datasets 4
size of image datasets 13.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) bioluminescence

Paper information Hattori M et. al. (2020), Sensors (Basel) 20(24)
doi: 10.3390/s20247166
pmid: 33327525

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Project 239-Miyamoto-MitochondrialDyn
SSBD:repository:
ssbd-repos-000239

Release, Updated 2022-11-23

# of image datasets 1
size of image datasets 160.5 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) mitochondrial chromosome

Paper information Miyamoto T et. al. (2021), STAR Protoc 2(3), 100721
doi: 10.1016/j.xpro.2021.100721
pmid: 34401787

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Project 240-Yoshizawa-MitosisDyn
SSBD:repository:
ssbd-repos-000240

Release, Updated 2022-11-23

# of image datasets 3
size of image datasets 74.3 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) mitotic cell cycle

Paper information Yoshizawa K et. al. (2020), Front Cell Dev Biol 8, 721
doi: 10.3389/fcell.2020.00721
pmid: 32850837

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Project 241-Vu-TemperatureDyn
SSBD:repository:
ssbd-repos-000241

Release, Updated 2022-11-23

# of image datasets 5
size of image datasets 118.6 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) response to ionomycin, heat transoport into cells from a micrometer-sized heat supply, cellular response to ionomycin, cellular response to heating

Paper information Vu CQ et. al. (2021), Sci Rep 11(1), 16519
doi: 10.1038/s41598-021-96049-5
pmid: 34389773

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Project 242-Wazawa-CellDyn
SSBD:repository:
ssbd-repos-000242

Release, Updated 2022-11-23

# of image datasets 16
size of image datasets 2.8 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Cercopithecidae

DataType(s) Photobleaching of Kohinoor 2.0, mitochondrial fission, Photoswitching of Kohinoor 2.0, Actin filament dynamics, mitochondrial fusion

Paper information Wazawa T et. al. (2021), Microscopy (Oxf) 70(4), 340-352
doi: 10.1093/jmicro/dfab001
pmid: 33481018

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Project 140-Hirata-MouseBrainSlice
SSBD:repository:
ssbd-repos-000140

Release, Updated 2022-04-15

# of image datasets 84
size of image datasets 1.6 TB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) nervous system development

Paper information Hirata T et. al. (2021), Cell Rep Methods 1(3), 100012
doi: 10.1016/j.crmeth.2021.100012
pmid: 35474959

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Project 131-Wen-NeuronalNucDyn
SSBD:repository:
ssbd-repos-000131

Release, Updated 2022-03-31

# of image datasets 6
size of image datasets 9.2 GB

# of quantitative datasets 1
size of quantitative datasets 12.9 MB

Organism(s) Caenorhabditis elegans

DataType(s) nucleus localization

Paper information Wen C et. al. (2021), Elife 10
doi: 10.7554/eLife.59187
pmid: 33781383

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Project 138-Ito-SPBDyn
SSBD:repository:
ssbd-repos-000138

Release, Updated 2022-03-31

# of image datasets 5
size of image datasets 62.8 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Schizosaccharomyces pombe

DataType(s) oscillatory muscle contraction

Paper information Ito H et. al. (2019), Biochem Biophys Res Commun 511(4), 820-825
doi: 10.1016/j.bbrc.2019.02.128
pmid: 30846209

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Project 164-Ono-NeuPMCA
SSBD:repository:
ssbd-repos-000164

Release, Updated 2022-03-31

# of image datasets 2
size of image datasets 145.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) synaptic vesicle recycling

Paper information Ono Y et. al. (2019), Sci Rep 9(1), 4289
doi: 10.1038/s41598-019-40557-y
pmid: 30862855

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Project 170-Tsutsui-HookBM
SSBD:repository:
ssbd-repos-000170

Release, Updated 2022-03-31

# of image datasets 1
size of image datasets 236.6 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) basement membrane

Paper information Tsutsui K et. al. (2021), Nat Commun 12(1), 2577
doi: 10.1038/s41467-021-22881-y
pmid: 33972551

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Project 172-Yoshida-ERKTracheaDev
SSBD:repository:
ssbd-repos-000172

Release, Updated 2022-03-31

# of image datasets 2
size of image datasets 62.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) MAP kinase activity

Paper information Yoshida T et. al. (2020), Front Cell Dev Biol 8, 585640
doi: 10.3389/fcell.2020.585640
pmid: 33195234

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Project 177-Kinjo-cAMPsignalingDyn
SSBD:repository:
ssbd-repos-000177

Release, Updated 2022-03-31

# of image datasets 112
size of image datasets 4.3 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Canis lupus familiaris, Mus musculus

DataType(s) cAMP-mediated signaling

Paper information Kinjo T et. al. (2020), ACS Chem Biol 15(11), 2848-2853
doi: 10.1021/acschembio.0c00333
pmid: 33074647

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Project 178-konagaya-CellMigration
SSBD:repository:
ssbd-repos-000178

Release, Updated 2022-03-31

# of image datasets 160
size of image datasets 55.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) extracellular signal-regulated kinase activity

Paper information Konagaya Y et. al. (2020), Cell Cycle 19(22), 3167-3181
doi: 10.1080/15384101.2020.1838779
pmid: 33131406

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Project 179-Kobachi-BLVRAactivity
SSBD:repository:
ssbd-repos-000179

Release, Updated 2022-03-31

# of image datasets 89
size of image datasets 2.0 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Mus musculus

DataType(s) biliverdin reductase

Paper information Kobachi K et. al. (2020), Cell Struct Funct 45(2), 131-141
doi: 10.1247/csf.20010
pmid: 32581154

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Project 180-Watabe-Biosensoractivity
SSBD:repository:
ssbd-repos-000180

Release, Updated 2022-03-31

# of image datasets 115
size of image datasets 3.9 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens, Canis lupus familiaris, Mus musculus

DataType(s) extracellular signal-regulated kinase activity

Paper information Watabe T et. al. (2020), ACS Sens 5(3), 719-730
doi: 10.1021/acssensors.9b01941
pmid: 32101394

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Project 183-Iwasaki-SpineDyn
SSBD:repository:
ssbd-repos-000183

Release, Updated 2022-03-31

# of image datasets 34
size of image datasets 3.7 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) synapse organization, dendritic spine development

Paper information Iwasaki K et. al. (2020), Eur J Neurosci 51(3), 806-821
doi: 10.1111/ejn.14634
pmid: 31793065

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Project 184-Tanaka-SpineDyn
SSBD:repository:
ssbd-repos-000184

Release, Updated 2022-03-31

# of image datasets 11
size of image datasets 199.7 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) dendritic spine

Paper information Tanaka S et. al. (2020), Microscopy (Oxf) 69(1), 44-52
doi: 10.1093/jmicro/dfaa001
pmid: 31990031

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Project 185-Hoshino-MyotubeCa2Signal
SSBD:repository:
ssbd-repos-000185

Release, Updated 2022-03-31

# of image datasets 10
size of image datasets 304.1 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) myotube differentiation, calcium signaling

Paper information Hoshino D et. al. (2020), iScience 23(10), 101558
doi: 10.1016/j.isci.2020.101558
pmid: 33083727

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Project 188-Ipponjima-NHEKsCornification
SSBD:repository:
ssbd-repos-000188

Release, Updated 2022-03-31

# of image datasets 21
size of image datasets 265.3 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) keratinocyte activation, mitochondrial depolarization

Paper information Ipponjima S et. al. (2020), Sci Rep 10(1), 5515
doi: 10.1038/s41598-020-62240-3
pmid: 32218450

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Project 189-Kobayashi-NSCsDyn
SSBD:repository:
ssbd-repos-000189

Release, Updated 2022-03-31

# of image datasets 17
size of image datasets 6.8 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) cell division, negative regulation of lysosomal protein catabolic process

Paper information Kobayashi T et. al. (2019), Nat Commun 10(1), 5446
doi: 10.1038/s41467-019-13203-4
pmid: 31784517

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Project 190-Iguchi-SpineDyn
SSBD:repository:
ssbd-repos-000190

Release, Updated 2022-03-31

# of image datasets 4
size of image datasets 309.2 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) response to social isolation

Paper information Iguchi R et. al. (2020), Neurosci Res 154, 27-34
doi: 10.1016/j.neures.2019.05.004
pmid: 31226269

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Project 192-Hiroshima-SingleMolDyn
SSBD:repository:
ssbd-repos-000192

Release, Updated 2022-03-31

# of image datasets 60
size of image datasets 1.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Cricetulus griseus

DataType(s) epidermal growth factor receptor binding

Paper information Hiroshima M et. al. (2020), Microscopy (Oxf) 69(2), 69-78
doi: 10.1093/jmicro/dfz116
pmid: 32090254

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Project 194-Obashi-SpineDyn
SSBD:repository:
ssbd-repos-000194

Release, Updated 2022-03-31

# of image datasets 21
size of image datasets 9.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) NA, signaling molecule

Paper information Obashi K et. al. (2019), Cell Rep 27(5), 1503-1515.e8
doi: 10.1016/j.celrep.2019.04.006
pmid: 31042476

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Project 196-Sueda-GeneExpReg
SSBD:repository:
ssbd-repos-000196

Release, Updated 2022-03-31

# of image datasets 24
size of image datasets 2.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) regulation of gene expression, gene expression

Paper information Sueda R et. al. (2019), Genes Dev 33(9-10), 511-523
doi: 10.1101/gad.323196.118
pmid: 30862661

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Project 202-Miyagawa-ChemotaxisDyn
SSBD:repository:
ssbd-repos-000202

Release, Updated 2022-03-31

# of image datasets 4
size of image datasets 3.9 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Dictyostelium discoideum

DataType(s) chemotaxis

Paper information Miyagawa T et. al. (2018), Nat Commun 9(1), 4635
doi: 10.1038/s41467-018-07035-x
pmid: 30401901

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Project 203-Tanabe-SingleDyn
SSBD:repository:
ssbd-repos-000203

Release, Updated 2022-03-31

# of image datasets 11
size of image datasets 254.5 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Dictyostelium discoideum

DataType(s) cAMP binding

Paper information Tanabe Y et. al. (2018), J Cell Sci 131(23)
doi: 10.1242/jcs.214775
pmid: 30404836

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Project 205-Shen-CellPatterning
SSBD:repository:
ssbd-repos-000205

Release, Updated 2022-03-31

# of image datasets 5
size of image datasets 1.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) -

Paper information Shen Y et. al. (2020), PLoS One 15(5), e0232518
doi: 10.1371/journal.pone.0232518
pmid: 32433673

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Project 206-Miyamoto-CiliaryMorphology
SSBD:repository:
ssbd-repos-000206

Release, Updated 2022-03-31

# of image datasets 1
size of image datasets 173.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) ciliary pocket membrane, peroxisome

Paper information Miyamoto T et. al. (2020), EMBO J 39(12), e103499
doi: 10.15252/embj.2019103499
pmid: 32368833

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Project 207-Kuroda-FinMorphology
SSBD:repository:
ssbd-repos-000207

Release, Updated 2022-03-31

# of image datasets 1
size of image datasets 248.1 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Danio rerio

DataType(s) basement membrane

Paper information Kuroda J et. al. (2020), Front Cell Dev Biol 8, 580520
doi: 10.3389/fcell.2020.580520
pmid: 33154970

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Project 211-Hiroshima-EGFRTracking
SSBD:repository:
ssbd-repos-000211

Release, Updated 2022-03-31

# of image datasets 12
size of image datasets 31.3 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Cricetulus griseus

DataType(s) epidermal growth factor receptor binding, epidermal growth factor-activated receptor activity

Paper information Hiroshima M et. al. (2018), J Mol Biol 430(9), 1386-1401
doi: 10.1016/j.jmb.2018.02.018
pmid: 29505756

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Project 212-Kajikawa-GeckoEmbryos
SSBD:repository:
ssbd-repos-000212

Release, Updated 2022-03-31

# of image datasets 3
size of image datasets 5.0 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Gekko

DataType(s) left/right axis specification

Paper information Kajikawa E et. al. (2020), Nat Ecol Evol 4(2), 261-269
doi: 10.1038/s41559-019-1072-2
pmid: 31907383

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Project 213-Yoshida-SpindleDyn
SSBD:repository:
ssbd-repos-000213

Release, Updated 2022-03-31

# of image datasets 16
size of image datasets 43.0 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) meiosis I nuclear membrane disassembly

Paper information Yoshida S et. al. (2020), Nat Commun 11(1), 2652
doi: 10.1038/s41467-020-16488-y
pmid: 32461611

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Project 217-Sakai-iRFPactivity
SSBD:repository:
ssbd-repos-000217

Release, Updated 2022-03-31

# of image datasets 8
size of image datasets 437.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Schizosaccharomyces pombe, Saccharomyces cerevisiae

DataType(s) biliverdin reductase (NAD(P)+) activity

Paper information Sakai K et. al. (2021), J Cell Sci 134(24)
doi: 10.1242/jcs.259315
pmid: 34806750

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Project 72-Kyogoku-CytoplasmNucDyn
SSBD:repository:
ssbd-repos-000072

Release, Updated 2021-11-30

# of image datasets 453
size of image datasets 6.7 TB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) cytoplasm organization, nuclear envelope breakdown, mitotic cell cycle

Paper information Kyogoku H and Kitajima TS (2017), Dev Cell 41(3), 287-298.e4
doi: 10.1016/j.devcel.2017.04.009
pmid: 28486131

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Project 70-Yoshida-KTMTDyn
SSBD:repository:
ssbd-repos-000070

Release, Updated 2021-09-30

# of image datasets 265
size of image datasets 371.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) mitotic cell cycle

Paper information Yoshida S et. al. (2015), Dev Cell 33(5), 589-602
doi: 10.1016/j.devcel.2015.04.020
pmid: 26028219

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Project 120-Ding-CentromericDyn
SSBD:repository:
ssbd-repos-000120

Release, Updated 2021-09-30

# of image datasets 351
size of image datasets 720.8 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) meiotic cell cycle, centromeric sister chromatid cohesion

Paper information Ding Y et. al. (2018), Curr Biol 28(10), 1661-1669.e4
doi: 10.1016/j.cub.2018.04.019
pmid: 29754905

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Project 126-Imanishi-CellMorNuCyM
SSBD:repository:
ssbd-repos-000126

Release, Updated 2021-09-30

# of image datasets 46
size of image datasets 69.8 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) plasma membrane

Paper information Imanishi A et. al. (2018), Cell Struct Funct 43(2), 129-140
doi: 10.1247/csf.18013
pmid: 29962383

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Project 127-Konishi-ERKDyn
SSBD:repository:
ssbd-repos-000127

Release, Updated 2021-09-30

# of image datasets 143
size of image datasets 26.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) activation of MAPERK kinase, cell motility

Paper information Konishi Y et. al. (2018), iScience 10, 98-113
doi: 10.1016/j.isci.2018.11.025
pmid: 30508722

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Project 128-Muta-IECsERKDyn
SSBD:repository:
ssbd-repos-000128

Release, Updated 2021-09-30

# of image datasets 470
size of image datasets 62.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) ERBB2-EGFR signaling pathway, ERBB2 signaling pathway, epidermal growth factor signaling pathway, activation of MAPERK kinase

Paper information Muta Y et. al. (2018), Nat Commun 9(1), 2174
doi: 10.1038/s41467-018-04527-8
pmid: 29872037

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Project 129-Komatsu-ERKBiosensorActivity
SSBD:repository:
ssbd-repos-000129

Release, Updated 2021-09-30

# of image datasets 13
size of image datasets 6.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) activation of MAPERK kinase

Paper information Komatsu N et. al. (2018), Sci Rep 8(1), 8984
doi: 10.1038/s41598-018-27174-x
pmid: 29895862

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Project 130-Sano-CellMigrationDyn
SSBD:repository:
ssbd-repos-000130

Release, Updated 2021-09-30

# of image datasets 26
size of image datasets 4.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) cell migration, activation of MAPERK kinase

Paper information Sano T et. al. (2018), Am J Pathol 188(11), 2564-2573
doi: 10.1016/j.ajpath.2018.07.010
pmid: 30121259

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Project 161-Tanaka-MEFMitochondrial
SSBD:repository:
ssbd-repos-000161

Release, Updated 2021-09-30

# of image datasets 4
size of image datasets 6.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) gene expression

Paper information Tanaka H et. al. (2019), J Cell Sci 132(11)
doi: 10.1242/jcs.224766
pmid: 31076512

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Project 165-Kinjo-ERKactivity
SSBD:repository:
ssbd-repos-000165

Release, Updated 2021-09-30

# of image datasets 20
size of image datasets 1.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Canis lupus familiaris, Mus musculus

DataType(s) extracellular signal-regulated kinase activity

Paper information Kinjo T et. al. (2019), Nat Methods 16(10), 1029-1036
doi: 10.1038/s41592-019-0541-5
pmid: 31501546

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Project 166-Takubo-ECsTrajectory
SSBD:repository:
ssbd-repos-000166

Release, Updated 2021-09-30

# of image datasets 5
size of image datasets 5.2 GB

# of quantitative datasets 4
size of quantitative datasets 5.4 MB

Organism(s) Mus musculus

DataType(s) endothelial cell morphogenesis

Paper information Takubo N et. al. (2019), Sci Rep 9(1), 9304
doi: 10.1038/s41598-019-45666-2
pmid: 31243314

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Project 171-Ochi-Hes1DynNPCs
SSBD:repository:
ssbd-repos-000171

Release, Updated 2021-09-30

# of image datasets 3
size of image datasets 696.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) translation activator activity

Paper information Ochi S et. al. (2020), Development 147(4)
doi: 10.1242/dev.182204
pmid: 32094111

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Project 134-Tanaka-SalivaryglandDev
SSBD:repository:
ssbd-repos-000134

Release, Updated 2020-12-23

# of image datasets 55
size of image datasets 1.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) organogenesis

Paper information Tanaka J et. al. (2018), Nat Commun 9(1), 4216
doi: 10.1038/s41467-018-06469-7
pmid: 30310071

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Project 142-Wen-CellShape
SSBD:repository:
ssbd-repos-000142

Release, Updated 2020-12-23

# of image datasets 4
size of image datasets 5.5 GB

# of quantitative datasets 4
size of quantitative datasets 126.1 KB

Organism(s) Drosophila

DataType(s) mesodermal cell migration, ventral furrow formation

Paper information Wen FL et. al. (2017), Biophys J 112(12), 2683-2695
doi: 10.1016/j.bpj.2017.05.012
pmid: 28636924

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Project 150-Abe-SomiteDev
SSBD:repository:
ssbd-repos-000150

Release, Updated 2020-12-23

# of image datasets 18
size of image datasets 145.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Oryzias

DataType(s) somite development

Paper information Abe K et. al. (2019), Cell Rep 27(3), 928-939.e4
doi: 10.1016/j.celrep.2019.03.068
pmid: 30995487

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Project 42-Hayashi-NeuronalCellDyn
SSBD:repository:
ssbd-repos-000042

Release, Updated 2019-11-20

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 198
size of quantitative datasets 87.2 MB

Organism(s) Rattus norvegicus

DataType(s) neuron cell dynamics

Paper information Hayashi K et. al. (2018), Mol Biol Cell 29(25), 3017-3025
doi: 10.1091/mbc.E18-01-0022
pmid: 30281391

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Project 66-Iwata-CellDynOSNMT
SSBD:repository:
ssbd-repos-000066

Release, Updated 2019-11-20

# of image datasets 2403
size of image datasets 98.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) calcium imaging data

Paper information Iwata R et. al. (2017), Neuron 96(5), 1139-1152.e7
doi: 10.1016/j.neuron.2017.11.008
pmid: 29216451

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Project 68-Sakaguchi-NeuronFluo
SSBD:repository:
ssbd-repos-000068

Release, Updated 2019-11-20

# of image datasets 67
size of image datasets 269.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) neuronal morphology

Paper information Sakaguchi R et. al. (2018), Elife 7
doi: 10.7554/eLife.40350
pmid: 30454553

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Project 86-Higashi-SynapseDyn
SSBD:repository:
ssbd-repos-000086

Release, Updated 2019-11-20

# of image datasets 16
size of image datasets 1.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) synapse dynamics

Paper information Higashi T et. al. (2018), Cell Rep 22(4), 919-929
doi: 10.1016/j.celrep.2017.12.101
pmid: 29386134

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Project 94-Matsuda-Beetlehorn
SSBD:repository:
ssbd-repos-000094

Release, Updated 2019-11-20

# of image datasets 5
size of image datasets 7.8 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Trypoxylus dichotomus

DataType(s) horn primordia dynamic

Paper information Matsuda K et. al. (2017), Sci Rep 7(1), 13939
doi: 10.1038/s41598-017-14170-w
pmid: 29066748

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Project 98-Morita-ToothEpiCellDyn
SSBD:repository:
ssbd-repos-000098

Release, Updated 2019-11-20

# of image datasets 5
size of image datasets 12.4 GB

# of quantitative datasets 1
size of quantitative datasets 10.1 MB

Organism(s) Mus musculus

DataType(s) tooth epithelium deformation

Paper information Morita R et. al. (2016), PLoS One 11(9), e0161336
doi: 10.1371/journal.pone.0161336
pmid: 27588418

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Project 99-Takagi-HairRegiPSCell
SSBD:repository:
ssbd-repos-000099

Release, Updated 2019-11-20

# of image datasets 6
size of image datasets 50.2 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) hair regeneration

Paper information Takagi R et. al. (2016), Sci Adv 2(4), e1500887
doi: 10.1126/sciadv.1500887
pmid: 27051874

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Project 100-Yamamoto-ToothDev
SSBD:repository:
ssbd-repos-000100

Release, Updated 2019-11-20

# of image datasets 7
size of image datasets 130.4 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) tooth dynamics

Paper information Yamamoto N et. al. (2015), Sci Rep 5, 18393
doi: 10.1038/srep18393
pmid: 26673152

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Project 101-Oshima-ToothBioImplant
SSBD:repository:
ssbd-repos-000101

Release, Updated 2019-11-20

# of image datasets 8
size of image datasets 8.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) tissue structure

Paper information Oshima M et. al. (2014), Sci Rep 4, 6044
doi: 10.1038/srep06044
pmid: 25116435

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Project 102-Ogawa-SalivaryGlandDev
SSBD:repository:
ssbd-repos-000102

Release, Updated 2019-11-20

# of image datasets 6
size of image datasets 167.5 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) generation of salivary gland

Paper information Ogawa M et. al. (2013), Nat Commun 4, 2498
doi: 10.1038/ncomms3498
pmid: 24084982

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Project 103-Hirayama-GlandReg
SSBD:repository:
ssbd-repos-000103

Release, Updated 2019-11-20

# of image datasets 24
size of image datasets 34.3 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) gland regeneration

Paper information Hirayama M et. al. (2013), Nat Commun 4, 2497
doi: 10.1038/ncomms3497
pmid: 24084941

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Project 104-Bin-SkinImmuno
SSBD:repository:
ssbd-repos-000104

Release, Updated 2019-11-20

# of image datasets 5
size of image datasets 20.2 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) immnocytochemistry of skin

Paper information Bin BH et. al. (2017), Proc Natl Acad Sci U S A 114(46), 12243-12248
doi: 10.1073/pnas.1710726114
pmid: 29078349

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Project 105-Ono-ToothDev
SSBD:repository:
ssbd-repos-000105

Release, Updated 2019-11-20

# of image datasets 9
size of image datasets 333.4 KB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Canis lupus familiaris

DataType(s) tooth development

Paper information Ono M et. al. (2017), Sci Rep 7, 44522
doi: 10.1038/srep44522
pmid: 28300208

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Project 108-Sugita-RPEiPSCell
SSBD:repository:
ssbd-repos-000108

Release, Updated 2019-11-20

# of image datasets 9
size of image datasets 6.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Macaca fascicularis

DataType(s) cell dynamics

Paper information Sugita S et. al. (2017), Stem Cell Reports 9(5), 1501-1515
doi: 10.1016/j.stemcr.2017.10.003
pmid: 29103970

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Project 109-Mandai-RPEiPSCell
SSBD:repository:
ssbd-repos-000109

Release, Updated 2019-11-20

# of image datasets 15
size of image datasets 29.8 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) iPS derived retinal pigment epithelial cell sheet

Paper information Mandai M et. al. (2017), N Engl J Med 376(11), 1038-1046
doi: 10.1056/NEJMoa1608368
pmid: 28296613

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Project 111-Kawaguchi-NPCellsDyn
SSBD:repository:
ssbd-repos-000111

Release, Updated 2019-11-20

# of image datasets 30
size of image datasets 15.7 GB

# of quantitative datasets 2
size of quantitative datasets 12.3 MB

Organism(s) Mus musculus

DataType(s) cell dynamics

Paper information Kawaguchi K et. al. (2017), Nature 545(7654), 327-331
doi: 10.1038/nature22321
pmid: 28403137

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Project 113-Kamioka-CellDyn
SSBD:repository:
ssbd-repos-000113

Release, Updated 2019-11-20

# of image datasets 5
size of image datasets 1.8 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) Cell dynamics, ERK activation by FRET

Paper information Kamioka Y et. al. (2017), Cancer Sci 108(2), 226-235
doi: 10.1111/cas.13132
pmid: 27960041

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Project 114-Shiura-MouseEmbryoDyn
SSBD:repository:
ssbd-repos-000114

Release, Updated 2019-11-20

# of image datasets 179
size of image datasets 14.3 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) X chromosome inactivation (XCI) dynamics

Paper information Shiura H and Abe K (2019), Sci Rep 9(1), 3637
doi: 10.1038/s41598-019-38807-0
pmid: 30842444

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Project 115-Nabeshima-DuodenumVilliCell
SSBD:repository:
ssbd-repos-000115

Release, Updated 2019-11-20

# of image datasets 3
size of image datasets 681.0 KB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) transgene expression

Paper information Nabeshima R et. al. (2018), Elife 7
doi: 10.7554/eLife.36435
pmid: 30070635

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Project 116-Yamada-Glycogen
SSBD:repository:
ssbd-repos-000116

Release, Updated 2019-11-20

# of image datasets 12
size of image datasets 67.3 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Drosophila

DataType(s) tissuel immunostaining

Paper information Yamada T et. al. (2018), Development 145(6)
doi: 10.1242/dev.158865
pmid: 29467247

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Project 118-Iraha-hESCRetina
SSBD:repository:
ssbd-repos-000118

Release, Updated 2019-11-20

# of image datasets 4
size of image datasets 24.6 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Homo sapiens

DataType(s) tissue morphology

Paper information Iraha S et. al. (2018), Stem Cell Reports 10(3), 1059-1074
doi: 10.1016/j.stemcr.2018.01.032
pmid: 29503091

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Project 119-Sakashita-FishVertebrae
SSBD:repository:
ssbd-repos-000119

Release, Updated 2019-11-20

# of image datasets 141
size of image datasets 140.1 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Takifugu snyderi, Histiopterus typus, Scarus forsteni, Rexea prometheoides, Acropoma hanedai, Muraenesox cinereus, Sebastes oblongus, Hippoglossoides dubius, Plecoglossus altivelis altivelis, Sebastes zonatus, Takifugu pardalis, Cololabis saira, Paralichthys olivaceus, Chelidonichthys spinosus, Zeus faber, Lophiomus setigerus, Thunnus tonggol, Takifugu stictonotus, Konosirus punctatus, Sillago japonica, Trachurus japonicus, Chaunax abei, Sardinops melanosticta, Thunnus orientalis, Helicolenus hilgendorfi, Lophius litulon, Macrorhamphosodes uradoi, Zenopsis nebulosus, Sphyraena pinguis, Pagrus major, Scomber japonicus, Macroramphosus sagifue

DataType(s) vertebral bodies of teleost fish

Paper information Sakashita M et. al. (2019), J Morphol 280(6), 778-795
doi: 10.1002/jmor.20983
pmid: 30945336

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Project 121-Inoue-SingleCellDyn
SSBD:repository:
ssbd-repos-000121

Release, Updated 2019-11-20

# of image datasets 29
size of image datasets 18.5 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) single cell dynamics

Paper information Inoue H et. al. (2018), Cell Struct Funct 43(2), 153-169
doi: 10.1247/csf.18012
pmid: 30047513

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Project 123-Yalikun-ZygoteDyn
SSBD:repository:
ssbd-repos-000123

Release, Updated 2019-11-20

# of image datasets 2
size of image datasets 542.3 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) zygote rotation

Paper information Yalikun, Yaxiaer et. al. (2018), Micro & Nano Letters 13(3), 306-311
doi: 10.1049/mnl.2017.0731

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Project 124-Ueda-miPSRetina
SSBD:repository:
ssbd-repos-000124

Release, Updated 2019-11-20

# of image datasets 31
size of image datasets 99.0 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) retina differentiation

Paper information Ueda K et. al. (2018), Biochem Biophys Res Commun 495(4), 2595-2601
doi: 10.1016/j.bbrc.2017.12.092
pmid: 29274337

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Project 125-Gessesse-CX3CR1nanodisc
SSBD:repository:
ssbd-repos-000125

Release, Updated 2019-11-20

# of image datasets 1
size of image datasets 412.7 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) -

DataType(s) protein analysis

Paper information Gessesse B et. al. (2018), Life (Basel) 8(4)
doi: 10.3390/life8040054
pmid: 30400226

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Project 132-Goto-CellMor
SSBD:repository:
ssbd-repos-000132

Release, Updated 2019-11-20

# of image datasets 12
size of image datasets 12.4 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) Electron micrographs

Paper information Goto S et. al. (2018), Elife 7
doi: 10.7554/eLife.32358
pmid: 29609731

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Project 135-Maruyama-LymVesselImmuno
SSBD:repository:
ssbd-repos-000135

Release, Updated 2019-11-20

# of image datasets 17
size of image datasets 58.9 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) Immunostaining, Immunostaining

Paper information Maruyama K et. al. (2019), Dev Biol 452(2), 134-143
doi: 10.1016/j.ydbio.2019.05.002
pmid: 31112709

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Project 136-Matsumiya-ESCellDyn
SSBD:repository:
ssbd-repos-000136

Release, Updated 2019-11-20

# of image datasets 9
size of image datasets 216.6 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) Hes7 expression dynamics

Paper information Matsumiya M et. al. (2018), Development 145(4)
doi: 10.1242/dev.156836
pmid: 29437832

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Project 141-Sato-CellMorphology
SSBD:repository:
ssbd-repos-000141

Release, Updated 2019-11-20

# of image datasets 17
size of image datasets 51.1 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) synapse morphology

Paper information Sato Y and Okabe S (2019), Microscopy (Oxf) 68(2), 122-132
doi: 10.1093/jmicro/dfy128
pmid: 30371805

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Project 73-Fujii-NeuronalMolDynCa2

Release, Updated 2018-11-15

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 100
size of quantitative datasets 1.1 GB

Organism(s) -

DataType(s) molecular dynamics

Paper information Fujii M et. al. (2017), Biophys J 112(4), 813-826
doi: 10.1016/j.bpj.2016.12.043
pmid: 28256240

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Project 76-Tanaka-MuscleDyn
SSBD:repository:
ssbd-repos-000076

Release, Updated 2018-11-15

# of image datasets 0
size of image datasets 0 bytes

# of quantitative datasets 2
size of quantitative datasets 272.6 MB

Organism(s) Metaphire sieboldi

DataType(s) Muscle dynamics

Paper information Tanaka, Yo et. al. (2017), Sensors and Actuators B: Chemical 242, 1186-1192
doi: 10.1016/j.snb.2016.09.123

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Project 47-Noguchi-CellDyn
SSBD:repository:
ssbd-repos-000047

Release, Updated 2018-11-14

# of image datasets 38
size of image datasets 90.2 GB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) cell dynamics

Paper information Noguchi M et. al. (2015), Cell Rep 13(12), 2679-86
doi: 10.1016/j.celrep.2015.11.058
pmid: 26711336

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Project 55-Maekawa-ESCellDyn
SSBD:repository:
ssbd-repos-000055

Release, Updated 2018-11-14

# of image datasets 2
size of image datasets 54.9 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) tissue structure

Paper information Maekawa Y et. al. (2016), Curr Eye Res 41(4), 558-68
doi: 10.3109/02713683.2015.1038359
pmid: 25880804

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Project 57-Herawati-CellDyn
SSBD:repository:
ssbd-repos-000057

Release, Updated 2018-11-14,
2020-02-03

# of image datasets 23
size of image datasets 2.4 GB

# of quantitative datasets 1
size of quantitative datasets 971.8 KB

Organism(s) Mus musculus

DataType(s) epithelial cells dynamics

Paper information Herawati E et. al. (2016), J Cell Biol 214(5), 571-86
doi: 10.1083/jcb.201601023
pmid: 27573463

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Project 59-Yano-MicrotubuleImmuno
SSBD:repository:
ssbd-repos-000059

Release, Updated 2018-11-14

# of image datasets 1
size of image datasets 1.2 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) Microtubule immunofluorescence

Paper information Yano T et. al. (2013), J Cell Biol 203(4), 605-14
doi: 10.1083/jcb.201304194
pmid: 24385485

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Project 74-Bansod-NSCellHes5
SSBD:repository:
ssbd-repos-000074

Release, Updated 2018-11-14

# of image datasets 64
size of image datasets 124.7 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) cell dynamics

Paper information Bansod S et. al. (2017), Development 144(17), 3156-3167
doi: 10.1242/dev.147256
pmid: 28851724

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Project 75-Minegishi-NodeCell
SSBD:repository:
ssbd-repos-000075

Release, Updated 2018-11-14

# of image datasets 4
size of image datasets 5.2 MB

# of quantitative datasets 0
size of quantitative datasets 0 bytes

Organism(s) Mus musculus

DataType(s) cell tissue

Paper information Minegishi K et. al. (2017), Dev Cell 40(5), 439-452.e4
doi: 10.1016/j.devcel.2017.02.010
pmid: 28292423