SSBD:database

Thumbnail for 219-Konishi-CalciumIonDyn

Summary of 219-Konishi-CalciumIonDyn

SSBD:database
219-Konishi-CalciumIonDyn
SSBD:database URL
https://ssbd.riken.jp/database/219-Konishi-CalciumIonDyn/
SSBD:repository
ssbd-repos-000219
SSBD:repository URL
https://ssbd.riken.jp/repository/219/
Title
Live imaging of Ca2+ concentration dynamics in BrafV600E melanoma cells.
Description
-
Release date
2023-02-21
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
170 ( Image datasets: 170, Quantitative data datasets: 0 )
Size of Datasets
81.4 GB ( Image datasets: 81.4 GB, Quantitative data datasets: 0 bytes )
Organism(s)
Canis lupus familiaris, Mus musculus
Cell lines(s)
BrafV600E cell, MDCK cell
Gene symbol(s)
Gnaq, Ptger1, Ptgfr, Ptgs1, Ptgs1. Ptgs2. Gnaq, Ptgs2, Tbxa2r, Tbxas1, Tbxas2r
Protein name(s)
NFAT, PKA
Datatype
-
Molecular Function (MF)
G protein-coupled receptor binding
Biological Process (BP)
Cellular Component (CC)
Biological Imaging Method
bioluminescence imaging, time lapse microscopy
X scale
0.828 micrometer/pixel, 0.637 micrometer/pixel, 0.441 micrometer/pixel, 0.454 micrometer/pixel, 0.414 micrometer/pixel, 0.638924 micrometer/pixel, 0.552 micrometer/pixel, NA
Y scale
0.828 micrometer/pixel, 0.637 micrometer/pixel, 0.441 micrometer/pixel, 0.454 micrometer/pixel, 0.414 micrometer/pixel, 0.638924 micrometer/pixel, 0.552 micrometer/pixel, NA
Z scale
1 micrometer/slice, NA, 5 micrometer/slice
T scale
15 sec per time interval, 3.07 sec per time interval, 6 sec per time interval, 3.08 sec per time interval, 3.02 sec per time interval, 60.22 sec per time interval, 1 min per time interval, 65.43 sec per time interval, 97.39 sec per time interval, 60.09 sec per time interval, 65.3 sec per time interval, 3.05 sec per time interval, 1 sec per time interval, 60.30 sec per time interval, 3.03 sec per time interval, 1.11 sec per time interval, 3.01 sec per time interval, 60.31 sec per time interval, 59.71 sec per time interval, 60.73 sec per time interval, 3 sec per time interval, 6.01 sec per time interval, 5.98 sec per time interval, 3.11 sec per time interval, 60.11 sec per time interval, 60.19 sec per time interval, 3.06 sec per time interval, 60.18 sec per time interval, 6.02 sec per time interval, 61.28 sec per time interval, 60.08 sec per time interval
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Related paper(s)
Contact
Kenta Terai , kyoto University , Graduate School of Medicine , Department of Pathology and Biology of Diseases
Contributors

Dataset List of 219-Konishi-CalciumIonDyn

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#
Dataset ID
Kind
Size
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1A_control_MDCK_CNO
# 10319
Datast ID Figure1A_control_MDCK_CNO
Dataset Kind Image data
Dataset Size 2.0 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1A_EP24i_MDCK_CNO
# 10320
Datast ID Figure1A_EP24i_MDCK_CNO
Dataset Kind Image data
Dataset Size 1.8 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1C_BrafV600E_vitro_WT_GCaMP6s_N1
# 10321
Datast ID Figure1C_BrafV600E_vitro_WT_GCaMP6s_N1
Dataset Kind Image data
Dataset Size 303.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1C_BrafV600E_vitro_WT_GCaMP6s_N2
# 10322
Datast ID Figure1C_BrafV600E_vitro_WT_GCaMP6s_N2
Dataset Kind Image data
Dataset Size 302.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1C_BrafV600E_vitro_WT_GCaMP6s_N3
# 10323
Datast ID Figure1C_BrafV600E_vitro_WT_GCaMP6s_N3
Dataset Kind Image data
Dataset Size 302.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1C_BrafV600E_vivo_WT_GCaMP6s
# 10324
Datast ID Figure1C_BrafV600E_vivo_WT_GCaMP6s
Dataset Kind Image data
Dataset Size 309.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_CC_blocker_N1
# 10325
Datast ID Figure1D_CC_blocker_N1
Dataset Kind Image data
Dataset Size 420.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_CC_blocker_N2
# 10326
Datast ID Figure1D_CC_blocker_N2
Dataset Kind Image data
Dataset Size 926.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_CC_blocker_N3
# 10327
Datast ID Figure1D_CC_blocker_N3
Dataset Kind Image data
Dataset Size 927.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_CC_blocker_N4
# 10328
Datast ID Figure1D_CC_blocker_N4
Dataset Kind Image data
Dataset Size 821.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_Gq_inhibitor_N1
# 10329
Datast ID Figure1D_Gq_inhibitor_N1
Dataset Kind Image data
Dataset Size 455.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_Gq_inhibitor_N2
# 10330
Datast ID Figure1D_Gq_inhibitor_N2
Dataset Kind Image data
Dataset Size 455.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_Gq_inhibitor_N3
# 10331
Datast ID Figure1D_Gq_inhibitor_N3
Dataset Kind Image data
Dataset Size 455.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_TK_inhibitor_N1
# 10332
Datast ID Figure1D_TK_inhibitor_N1
Dataset Kind Image data
Dataset Size 926.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_TK_inhibitor_N2
# 10333
Datast ID Figure1D_TK_inhibitor_N2
Dataset Kind Image data
Dataset Size 926.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_TK_inhibitor_N3
# 10334
Datast ID Figure1D_TK_inhibitor_N3
Dataset Kind Image data
Dataset Size 1.1 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_YM-254890_N1
# 10335
Datast ID Figure1D_YM-254890_N1
Dataset Kind Image data
Dataset Size 927.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_YM-254890_N2
# 10336
Datast ID Figure1D_YM-254890_N2
Dataset Kind Image data
Dataset Size 927.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_YM-254890_N3
# 10337
Datast ID Figure1D_YM-254890_N3
Dataset Kind Image data
Dataset Size 927.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1D_YM-254890_N4
# 10338
Datast ID Figure1D_YM-254890_N4
Dataset Kind Image data
Dataset Size 213.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1E_GnaqKO_Gnaq_N1
# 10339
Datast ID Figure1E_GnaqKO_Gnaq_N1
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1E_GnaqKO_Gnaq_N2
# 10340
Datast ID Figure1E_GnaqKO_Gnaq_N2
Dataset Kind Image data
Dataset Size 309.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1E_GnaqKO_Gnaq_N3
# 10341
Datast ID Figure1E_GnaqKO_Gnaq_N3
Dataset Kind Image data
Dataset Size 411.7 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1E_GnaqKO_N1
# 10342
Datast ID Figure1E_GnaqKO_N1
Dataset Kind Image data
Dataset Size 411.7 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1E_GnaqKO_N2
# 10343
Datast ID Figure1E_GnaqKO_N2
Dataset Kind Image data
Dataset Size 412.8 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure1E_GnaqKO_N3
# 10344
Datast ID Figure1E_GnaqKO_N3
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure2AB_CAGpromotor_20200217
# 10345
Datast ID Figure2AB_CAGpromotor_20200217
Dataset Kind Image data
Dataset Size 6.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure2AB_CAGpromotor_20200223
# 10346
Datast ID Figure2AB_CAGpromotor_20200223
Dataset Kind Image data
Dataset Size 19.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure2AB_cAMP-REpromotor_20200411_WT_GqKO
# 10347
Datast ID Figure2AB_cAMP-REpromotor_20200411_WT_GqKO
Dataset Kind Image data
Dataset Size 12.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure2AB_cAMP-REpromotor_20200411_WT_ptgs12KO
# 10348
Datast ID Figure2AB_cAMP-REpromotor_20200411_WT_ptgs12KO
Dataset Kind Image data
Dataset Size 12.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_parental_N1
# 10349
Datast ID Figure3A_parental_N1
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_parental_N2
# 10350
Datast ID Figure3A_parental_N2
Dataset Kind Image data
Dataset Size 411.7 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_parental_N3
# 10351
Datast ID Figure3A_parental_N3
Dataset Kind Image data
Dataset Size 412.3 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_parental_N4
# 10352
Datast ID Figure3A_parental_N4
Dataset Kind Image data
Dataset Size 1.5 GB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_ptger1KO_N1
# 10353
Datast ID Figure3A_ptger1KO_N1
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_ptger1KO_N2
# 10354
Datast ID Figure3A_ptger1KO_N2
Dataset Kind Image data
Dataset Size 411.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_ptger1KO_N3
# 10355
Datast ID Figure3A_ptger1KO_N3
Dataset Kind Image data
Dataset Size 411.7 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_ptger1KO_N4
# 10356
Datast ID Figure3A_ptger1KO_N4
Dataset Kind Image data
Dataset Size 97.8 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_PtgfrKO_N1
# 10357
Datast ID Figure3A_PtgfrKO_N1
Dataset Kind Image data
Dataset Size 309.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_PtgfrKO_N2
# 10358
Datast ID Figure3A_PtgfrKO_N2
Dataset Kind Image data
Dataset Size 309.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_PtgfrKO_N3
# 10359
Datast ID Figure3A_PtgfrKO_N3
Dataset Kind Image data
Dataset Size 309.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_Tbxa2rKO_N1
# 10360
Datast ID Figure3A_Tbxa2rKO_N1
Dataset Kind Image data
Dataset Size 413.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_Tbxa2rKO_N2
# 10361
Datast ID Figure3A_Tbxa2rKO_N2
Dataset Kind Image data
Dataset Size 432.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure3A_Tbxa2rKO_N3
# 10362
Datast ID Figure3A_Tbxa2rKO_N3
Dataset Kind Image data
Dataset Size 411.7 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_Tbxas1KO_N2
# 10363
Datast ID Figure4A_Tbxas1KO_N2
Dataset Kind Image data
Dataset Size 309.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_Tbxas1KO_N1
# 10364
Datast ID Figure4A_Tbxas1KO_N1
Dataset Kind Image data
Dataset Size 309.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_Tbxas1KO_N3
# 10365
Datast ID Figure4A_Tbxas1KO_N3
Dataset Kind Image data
Dataset Size 309.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_Tbxas1KO_N4
# 10366
Datast ID Figure4A_Tbxas1KO_N4
Dataset Kind Image data
Dataset Size 781.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4A_Tbxas1KO_N5
# 10367
Datast ID Figure4A_Tbxas1KO_N5
Dataset Kind Image data
Dataset Size 514.3 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Figure4B_VEGFRi_N1
# 10368
Datast ID Figure4B_VEGFRi_N1
Dataset Kind Image data
Dataset Size 405.9 MB
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SSBD:OMERO
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