Summary of 113-Kamioka-CellDyn


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
-
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
5 ( Image datasets: 5, Quantitative data datasets: 0 )
Size of Datasets
1.8 GB ( Image datasets: 1.8 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Strain(s)
PMN expressing ERK biosensor and 4T1 tumor cells expressing Red fluorescent protein
Protein name(s)
ERK

Datatype
Cell dynamics, ERK activation by FRET
Molecular Function (MF)
Biological Process (BP)
activation of MAPKK activity
Cellular Component (CC)
cell
Biological Imaging Method
-
XYZ Scale
XY: 0.552 micrometer/pixel, Z: 1 micrometer/slice, XY: 0.662 micrometer/pixel, Z: 1 micrometer/slice, XY: 0.764 micrometer/pixel, Z: 1 micrometer/slice
T scale
60.31 second for each time interval, 60.33 second for each time interval, 59.59 second for each time interval, 59.07 second for each time interval, 60.13 second for each time interval

Image Acquisition
Experiment type
FRET
Microscope type
MultiPhotonMicroscopy
Acquisition mode
-
Contrast method
Fluorescence
Microscope model
Olympus FV1200MPE-BX61WI
Detector model
-
Objective model
Olympus XLPLN 25XW-MP
Filter set
BA685RIF-3

Related paper(s)

Contact
Yuji Kamioka , Kansai Medical University
Contributors
Yuji Kamioka, Kanako Takakura, Kenta Sumiyama, Michiyuki Matsuda

Dataset List of 113-Kamioka-CellDyn

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset fig1f_ERKactivation
# 4492
Dataset Kind Image data
Dataset Size 105.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset fig3b_scr4T1_PMN
# 4493
Datast ID fig3b_scr4T1_PMN
Dataset Kind Image data
Dataset Size 634.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset fig3c_sh8704T1_PMN
# 4494
Datast ID fig3c_sh8704T1_PMN
Dataset Kind Image data
Dataset Size 347.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset figS8_ERK_OPN
# 4495
Datast ID figS8_ERK_OPN
Dataset Kind Image data
Dataset Size 239.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset figS10_OPN_ERK
# 4496
Datast ID figS10_OPN_ERK
Dataset Kind Image data
Dataset Size 534.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data