Summary of ssbd-repos-000202

SSBD:database
URL

Name
ssbd-repos-000202 (202-Miyagawa-ChemotaxisDyn)
URL
DOI
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Title
Time-lapse images of chemotaxis trajectories of gip1Δ cells harbouring vecotr, Gip1(wild-type), Gip1(D208A), or Gip1(ΔC-tail)
Description
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Submited Date
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Release Date
2022-03-31
Updated Date
-
License
Funding information
-
File formats
Data size
3.9 GB

Organism
Dictyostelium discoideum
Strain
gip1Δ cell
Cell Line
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Genes
gip1
Proteins
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GO Molecular Function (MF)
NA
GO Biological Process (BP)
chemotaxis
GO Cellular Component (CC)
NA
Study Type
Protein Phosphatase 1, Protein Binding, Signal Transduction, Protein Conformation, Chemotactic Factors, Heterotrimeric GTP-Binding Proteins/chemistry, Mutagenesis, Eukaryota, Saccharomyces cerevisiae Proteins, Models, Receptors, X-Ray, Hydrogen Bonding, G-Protein-Coupled/chemistry, G-Protein-Coupled, Chemotaxis/physiology, Heterotrimeric GTP-Binding Proteins, GTP-Binding Proteins/chemistry, Chemotactic Factors/chemistry, Cytosol, Molecular, GTP-Binding Proteins, GTP-Binding Proteins/genetics, Chemotaxis, Mutation, Crystallography, Dictyostelium, Protein Interaction Domains and Motifs, Cytosol/metabolism
Imaging Methods
time lapse microscopy

Method Summary
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Related paper(s)

Takero Miyagawa, Hiroyasu Koteishi, Yoichiro Kamimura, Yukihiro Miyanaga, Kohei Takeshita, Atsushi Nakagawa, Masahiro Ueda (2018) Structural basis of Gip1 for cytosolic sequestration of G protein in wide-range chemotaxis., Nature communications, Volume 9, Number 1, pp. 4635

Published in 2018 Nov 6 (Electronic publication in Nov. 6, 2018, midnight )

(Abstract) G protein interacting protein 1 (Gip1) binds and sequesters heterotrimeric G proteins in the cytosolic pool, thus regulating G protein-coupled receptor (GPCR) signalling for eukaryotic chemotaxis. Here, we report the underlying structural basis of Gip1 function. The crystal structure reveals that the region of Gip1 that binds to the G protein has a cylinder-like fold with a central hydrophobic cavity composed of six alpha-helices. Mutagenesis and biochemical analyses indicate that the hydrophobic cavity and the hydrogen bond network at the entrance of the cavity are essential for complex formation with the geranylgeranyl modification on the Ggamma subunit. Mutations of the cavity impair G protein sequestration and translocation to the membrane from the cytosol upon receptor stimulation, leading to defects in chemotaxis at higher chemoattractant concentrations. These results demonstrate that the Gip1-dependent regulation of G protein shuttling ensures wide-range gradient sensing in eukaryotic chemotaxis.
(MeSH Terms)

Contact(s)
Masahiro Ueda
Organization(s)
Osaka University , Graduate School of Frontier Biosciences , Laboratory for Cell Signaling Dynamics
Image Data Contributors
Quantitative Data Contributors

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