SSBD:repository

Summary of ssbd-repos-000296

SSBD:database

296-Kawabata-MouseBrainShape

URL

https://ssbd.riken.jp/database/296/

Name

ssbd-repos-000296 (296-Kawabata-MouseBrainShape)

URL

https://ssbd.riken.jp/repository/296/

DOI

Title

Image processing and manual annotation data of mouse brains with neurogenic-tagged neurons from NeuroGT database

Description

Segmentation results of brain contours and tagged neurons for 168 imaging data sets provided from NeuroGT database and manual annotation data of anatomical regions (isocortex, olfactory area, hippocampal formation, cerebral nuclei, interbrain, midbrain, hindbrain, and cerebellum) for images (131 images for the G2AN_TM11.5_L dataset and 10 images each for the other datasets) targeted mouse brains for evaluation

Submited Date

Release Date

2023-05-09

Updated Date

2023-05-29

License

CC BY 4.0

Funding information

File formats

Data size

100.2 GB

Organism

Mus musculus

Strain

C57BL/6 Neurod4^{CreER}(D4A); Tau^{mGFP-nLacZ}, C57BL/6 neuroG2^{CreER}(G2A); Tau^{mGFP-nLacZ}, C57BL/6 Neurod1^{CreER}(D1B); Tau^{mGFP-nLacZ}, C57BL/6 Neurog1^{CreER}(G1C); Tau^{mGFP-nLacZ}

Cell Line

Genes

Proteins

GO Molecular Function (MF)

GO Biological Process (BP)

nervous system development

GO Cellular Component (CC)

neuron projection, plasma membrane

Study Type

Imaging Methods

chemically fixed tissue, horseradish peroxidase, cryostat-sectioned tissue, bright-field microscopy

Method Summary