SSBD:database

Projects

Project
Release, Updated
Organism(s)
Datatype
# of images
# of quantitative data
Paper information
Project 257-Kubota-ERKActivity
Release, Updated 2023-03-22
Organism(s) Homo sapiens
DataType(s) MAP kinase activity
# of image datasets 3
# of quantitative datasets 0
Paper information Kubota Y et. al. (2022), Nat Commun 13(1), 4063
doi: 10.1038/s41467-022-31690-w
pmid: 35831322
Project 259-Lu-TemperatureDyn
Release, Updated 2023-03-22
Organism(s) Homo sapiens
DataType(s) heat dissipation, cellular response to temperature stimulus
# of image datasets 5
# of quantitative datasets 0
Paper information Lu K et. al. (2022), Nano Lett 22(14), 5698-5707
doi: 10.1021/acs.nanolett.2c00608
pmid: 35792763
Project 219-Konishi-CalciumIonDyn
Release, Updated 2023-02-21
Organism(s) Mus musculus, Canis lupus familiaris
DataType(s) G protein-coupled receptor binding
# of image datasets 170
# of quantitative datasets 0
Paper information Konishi Y et. al. (2021), Cancer Res 81(15), 4124-4132
doi: 10.1158/0008-5472.CAN-20-4245
pmid: 34035084
Project 220-Imanishi-ROCKActivity
Release, Updated 2023-02-16
Organism(s) Mus musculus
DataType(s) Rho-dependent protein serine/threonine kinase activity
# of image datasets 134
# of quantitative datasets 0
Paper information Imanishi A et. al. (2021), Am J Pathol 191(1), 194-203
doi: 10.1016/j.ajpath.2020.09.012
pmid: 33069718
Project 237-Jin-CellDynamics SSBD:repository:
ssbd-repos-000237
Release, Updated 2023-02-16
Organism(s) Mus musculus
DataType(s) -
# of image datasets 1354
# of quantitative datasets 0
Paper information Jin J et. al. (2023), Proc Natl Acad Sci U S A 120(1), e2210283120
doi: 10.1073/pnas.2210283120
pmid: 36577074
Project 244-Tokuoka-Embryogenesis
Release, Updated 2023-02-02
Organism(s) Mus musculus
DataType(s) embryo development
# of image datasets 2
# of quantitative datasets 0
Paper information Tokuoka Y et. al. (2020), NPJ Syst Biol Appl 6(1), 32
doi: 10.1038/s41540-020-00152-8
pmid: 33082352
Project 245-Hirasawa-OR-PAM
Release, Updated 2022-12-13
Organism(s) Homo sapiens
DataType(s) -
# of image datasets 5
# of quantitative datasets 0
Paper information Hirasawa T et. al. (2022), Photoacoustics 26, 100364
doi: 10.1016/j.pacs.2022.100364
pmid: 35574189
Project 247-Adhitama-Embryogenesis
Release, Updated 2022-12-13
Organism(s) Daphnia magna
DataType(s) embryo development
# of image datasets 4
# of quantitative datasets 0
Paper information Adhitama N et. al. (2020), PLoS One 15(10), e0239893
doi: 10.1371/journal.pone.0239893
pmid: 33035251
Project 253-Shimauchi-CalciumIonDyn
Release, Updated 2022-11-30
Organism(s) Homo sapiens
DataType(s) response to calcium ion
# of image datasets 13
# of quantitative datasets 0
Paper information Shimauchi T et. al. (2022), Cells 11(13)
doi: 10.3390/cells11132041
pmid: 35805125
Project 231-Asakura-ERKactivation
Release, Updated 2022-11-25
Organism(s) Canis lupus familiaris
DataType(s) MAP kinase activity
# of image datasets 1
# of quantitative datasets 0
Paper information Asakura Y et. al. (2021), Sci Rep 11(1), 4069
doi: 10.1038/s41598-021-83396-6
pmid: 33603023
Project 163-Wang-MitochondrialDyn
Release, Updated 2022-11-23
Organism(s) Homo sapiens
DataType(s) mitochondrial fusion
# of image datasets 10
# of quantitative datasets 0
Paper information Wang C et. al. (2019), Proc Natl Acad Sci U S A 116(32), 15817-15822
doi: 10.1073/pnas.1905924116
pmid: 31337683
Project 186-Tsuboi-TumorDyn
Release, Updated 2022-11-23
Organism(s) Homo sapiens, Mus musculus
DataType(s) apoptosis
# of image datasets 29
# of quantitative datasets 0
Paper information Tsuboi S and Jin T (2020), RSC Adv 10(63), 38244-38250
doi: 10.1039/d0ra06495e
pmid: 35517522
Project 187-Tsuboi-TumorDyn
Release, Updated 2022-11-23
Organism(s) Homo sapiens, Mus musculus
DataType(s) tumor suppressor
# of image datasets 5
# of quantitative datasets 0
Paper information Tsuboi S and Jin T (2020), RSC Adv 10(47), 28171-28179
doi: 10.1039/d0ra04710d
pmid: 35519107
Project 197-Bannai-CalciumIonSignaling
Release, Updated 2022-11-23
Organism(s) Homo sapiens, Rattus norvegicus, Mus musculus
DataType(s) calcium ion signaling
# of image datasets 7
# of quantitative datasets 0
Paper information Bannai H et. al. (2019), J Vis Exp(145)
doi: 10.3791/59246
pmid: 30958464
Project 199-Ichimura-MulticellularDyn SSBD:repository:
ssbd-repos-000199
Release, Updated 2022-11-23
Organism(s) Homo sapiens, Canis lupus familiaris, Dictyostelium discoideum, Mus musculus
DataType(s) calcium-mediated signaling, cAMP-mediated signaling
# of image datasets 7
# of quantitative datasets 0
Paper information Ichimura T et. al. (2021), Sci Rep 11(1), 16539
doi: 10.1038/s41598-021-95930-7
pmid: 34400683 Ichimura, T. et. al. (2021/01/01), 2020.06.29.179044
doi: 10.1101/2020.06.29.179044
Project 209-Kimura-SkinMorphology
Release, Updated 2022-11-23
Organism(s) Homo sapiens
DataType(s) skin epidermis development
# of image datasets 2
# of quantitative datasets 0
Paper information Kimura S et. al. (2020), Commun Biol 3(1), 637
doi: 10.1038/s42003-020-01365-7
pmid: 33127987
Project 210-Takeo-HFregeneration
Release, Updated 2022-11-23
Organism(s) Mus musculus
DataType(s) hair follicle development
# of image datasets 8
# of quantitative datasets 0
Paper information Takeo M et. al. (2021), Sci Rep 11(1), 1173
doi: 10.1038/s41598-020-80624-3
pmid: 33568688
Project 218-Tanaka-CellSignallingDyn
Release, Updated 2022-11-23
Organism(s) Mus musculus
DataType(s) IFN binding, interferon-gamma binding
# of image datasets 32
# of quantitative datasets 0
Paper information Tanaka T et. al. (2021), Cell Struct Funct 46(2), 103-111
doi: 10.1247/csf.21052
pmid: 34744115
Project 222-Dodo-RamanImaging SSBD:repository:
ssbd-repos-000222
Release, Updated 2022-11-23
Organism(s) Homo sapiens
DataType(s) metabolic process
# of image datasets 12
# of quantitative datasets 0
Paper information Dodo K et. al. (2021), Chem Commun (Camb) 57(17), 2180-2183
doi: 10.1039/d0cc07824g
pmid: 33527102
Project 224-Kamada-MitosisDyn
Release, Updated 2022-11-23
Organism(s) Homo sapiens, Nicotiana tabacum
DataType(s) mitotic cell cycle, cell division
# of image datasets 8
# of quantitative datasets 0
Paper information Kamada T et. al. (2022), Sci Rep 12(1), 809
doi: 10.1038/s41598-021-04543-7
pmid: 35039530
Project 225-Seiriki-WholeBrainDev
Release, Updated 2022-11-23
Organism(s) Mus musculus
DataType(s) brain development
# of image datasets 415
# of quantitative datasets 0
Paper information Seiriki K et. al. (2019), Nat Protoc 14(5), 1509-1529
doi: 10.1038/s41596-019-0148-4
pmid: 30962606
Project 226-Matsumura-WholeBrainDev
Release, Updated 2022-11-23
Organism(s) Mus musculus
DataType(s) brain development
# of image datasets 490
# of quantitative datasets 0
Paper information Matsumura K et. al. (2020), Nat Commun 11
doi: 10.1038/s41467-020-14697-z
pmid: 32103003
Project 227-Egoshi-RamanImaging SSBD:repository:
ssbd-repos-000227
Release, Updated 2022-11-23
Organism(s) Homo sapiens
DataType(s) -
# of image datasets 20
# of quantitative datasets 0
Paper information Egoshi S et. al. (2021), Org Biomol Chem 19(38), 8232-8236
doi: 10.1039/d1ob01479j
pmid: 34528645
Project 228-Kanadome-CellInteration
Release, Updated 2022-11-23
Organism(s) Homo sapiens
DataType(s) homophilic cell adhesion via plasma membrane adhesion molecules
# of image datasets 8
# of quantitative datasets 0
Paper information Kanadome T et. al. (2021), Sci Rep 11(1), 22237
doi: 10.1038/s41598-021-01481-2
pmid: 34782670
Project 229-Yamada-GeneExpression
Release, Updated 2022-11-23
Organism(s) Homo sapiens, Mus musculus
DataType(s) translation activator activity
# of image datasets 4
# of quantitative datasets 0
Paper information Yamada M et. al. (2020), iScience 23(9), 101506
doi: 10.1016/j.isci.2020.101506
pmid: 32919371
Project 233-Nishiyama-CellDyn
Release, Updated 2022-11-23
Organism(s) Homo sapiens
DataType(s) G protein-coupled receptor kinase activity
# of image datasets 41
# of quantitative datasets 0
Paper information Nishiyama K et. al. (2022), Sci Signal 15(716), eabj0644
doi: 10.1126/scisignal.abj0644
pmid: 35015570
Project 234-Kobayashi-ChemotaxisDyn
Release, Updated 2022-11-23
Organism(s) Notocomplana humilis
DataType(s) chemotaxis
# of image datasets 6
# of quantitative datasets 0
Paper information Kobayashi A et. al. (2022), Sci Adv 8(9), eabk0331
doi: 10.1126/sciadv.abk0331
pmid: 35245108
Project 235-Hattori-SmartphoneBioImaging
Release, Updated 2022-11-23
Organism(s) Homo sapiens
DataType(s) bioluminescence
# of image datasets 4
# of quantitative datasets 0
Paper information Hattori M et. al. (2020), Sensors (Basel) 20(24)
doi: 10.3390/s20247166
pmid: 33327525
Project 239-Miyamoto-MitochondrialDyn
Release, Updated 2022-11-23
Organism(s) Homo sapiens
DataType(s) mitochondrial chromosome
# of image datasets 1
# of quantitative datasets 0
Paper information Miyamoto T et. al. (2021), STAR Protoc 2(3), 100721
doi: 10.1016/j.xpro.2021.100721
pmid: 34401787
Project 240-Yoshizawa-MitosisDyn
Release, Updated 2022-11-23
Organism(s) Homo sapiens
DataType(s) mitotic cell cycle
# of image datasets 3
# of quantitative datasets 0
Paper information Yoshizawa K et. al. (2020), Front Cell Dev Biol 8, 721
doi: 10.3389/fcell.2020.00721
pmid: 32850837
Project 241-Vu-TemperatureDyn
Release, Updated 2022-11-23
Organism(s) Homo sapiens
DataType(s) cellular response to heating, response to ionomycin, heat transoport into cells from a micrometer-sized heat supply, cellular response to ionomycin
# of image datasets 5
# of quantitative datasets 0
Paper information Vu CQ et. al. (2021), Sci Rep 11(1), 16519
doi: 10.1038/s41598-021-96049-5
pmid: 34389773
Project 242-Wazawa-CellDyn
Release, Updated 2022-11-23
Organism(s) Homo sapiens, Cercopithecidae
DataType(s) Photoswitching of Kohinoor 2.0, Actin filament dynamics, mitochondrial fusion, mitochondrial fission, Photobleaching of Kohinoor 2.0
# of image datasets 16
# of quantitative datasets 0
Paper information Wazawa T et. al. (2021), Microscopy (Oxf) 70(4), 340-352
doi: 10.1093/jmicro/dfab001
pmid: 33481018
Project 140-Hirata-MouseBrainSlice SSBD:repository:
ssbd-repos-000140
Release, Updated 2022-04-15
Organism(s) Mus musculus
DataType(s) nervous system development
# of image datasets 84
# of quantitative datasets 0
Paper information Hirata T et. al. (2021), Cell Rep Methods 1(3), 100012
doi: 10.1016/j.crmeth.2021.100012
pmid: 35474959
Project 131-Wen-NeuronalNucDyn SSBD:repository:
131-Wen-NeuronalNucDyn
Release, Updated 2022-03-31
Organism(s) Caenorhabditis elegans
DataType(s) nucleus localization
# of image datasets 6
# of quantitative datasets 1
Paper information Wen C et. al. (2021), Elife 10
doi: 10.7554/eLife.59187
pmid: 33781383
Project 138-Ito-SPBDyn
Release, Updated 2022-03-31
Organism(s) Schizosaccharomyces pombe
DataType(s) oscillatory muscle contraction
# of image datasets 5
# of quantitative datasets 0
Paper information Ito H et. al. (2019), Biochem Biophys Res Commun 511(4), 820-825
doi: 10.1016/j.bbrc.2019.02.128
pmid: 30846209
Project 164-Ono-NeuPMCA
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) synaptic vesicle recycling
# of image datasets 2
# of quantitative datasets 0
Paper information Ono Y et. al. (2019), Sci Rep 9(1), 4289
doi: 10.1038/s41598-019-40557-y
pmid: 30862855
Project 170-Tsutsui-HookBM SSBD:repository:
ssbd-repos-000170
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) basement membrane
# of image datasets 1
# of quantitative datasets 0
Paper information Tsutsui K et. al. (2021), Nat Commun 12(1), 2577
doi: 10.1038/s41467-021-22881-y
pmid: 33972551
Project 172-Yoshida-ERKTracheaDev SSBD:repository:
ssbd-repos-000172
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) MAP kinase activity
# of image datasets 2
# of quantitative datasets 0
Paper information Yoshida T et. al. (2020), Front Cell Dev Biol 8, 585640
doi: 10.3389/fcell.2020.585640
pmid: 33195234
Project 177-Kinjo-cAMPsignalingDyn
Release, Updated 2022-03-31
Organism(s) Homo sapiens, Canis lupus familiaris, Mus musculus
DataType(s) cAMP-mediated signaling
# of image datasets 112
# of quantitative datasets 0
Paper information Kinjo T et. al. (2020), ACS Chem Biol 15(11), 2848-2853
doi: 10.1021/acschembio.0c00333
pmid: 33074647
Project 178-konagaya-CellMigration
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) extracellular signal-regulated kinase activity
# of image datasets 160
# of quantitative datasets 0
Paper information Konagaya Y et. al. (2020), Cell Cycle 19(22), 3167-3181
doi: 10.1080/15384101.2020.1838779
pmid: 33131406
Project 179-Kobachi-BLVRAactivity
Release, Updated 2022-03-31
Organism(s) Homo sapiens, Mus musculus
DataType(s) biliverdin reductase
# of image datasets 89
# of quantitative datasets 0
Paper information Kobachi K et. al. (2020), Cell Struct Funct 45(2), 131-141
doi: 10.1247/csf.20010
pmid: 32581154
Project 180-Watabe-Biosensoractivity
Release, Updated 2022-03-31
Organism(s) Homo sapiens, Canis lupus familiaris, Mus musculus
DataType(s) extracellular signal-regulated kinase activity
# of image datasets 115
# of quantitative datasets 0
Paper information Watabe T et. al. (2020), ACS Sens 5(3), 719-730
doi: 10.1021/acssensors.9b01941
pmid: 32101394
Project 183-Iwasaki-SpineDyn
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) synapse organization, dendritic spine development
# of image datasets 34
# of quantitative datasets 0
Paper information Iwasaki K et. al. (2020), Eur J Neurosci 51(3), 806-821
doi: 10.1111/ejn.14634
pmid: 31793065
Project 184-Tanaka-SpineDyn
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) dendritic spine
# of image datasets 11
# of quantitative datasets 0
Paper information Tanaka S et. al. (2020), Microscopy (Oxf) 69(1), 44-52
doi: 10.1093/jmicro/dfaa001
pmid: 31990031
Project 185-Hoshino-MyotubeCa2Signal
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) myotube differentiation, calcium signaling
# of image datasets 10
# of quantitative datasets 0
Paper information Hoshino D et. al. (2020), iScience 23(10), 101558
doi: 10.1016/j.isci.2020.101558
pmid: 33083727
Project 188-Ipponjima-NHEKsCornification
Release, Updated 2022-03-31
Organism(s) Homo sapiens
DataType(s) keratinocyte activation, mitochondrial depolarization
# of image datasets 21
# of quantitative datasets 0
Paper information Ipponjima S et. al. (2020), Sci Rep 10(1), 5515
doi: 10.1038/s41598-020-62240-3
pmid: 32218450
Project 189-Kobayashi-NSCsDyn
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) negative regulation of lysosomal protein catabolic process, cell division
# of image datasets 17
# of quantitative datasets 0
Paper information Kobayashi T et. al. (2019), Nat Commun 10(1), 5446
doi: 10.1038/s41467-019-13203-4
pmid: 31784517
Project 190-Iguchi-SpineDyn
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) response to social isolation
# of image datasets 4
# of quantitative datasets 0
Paper information Iguchi R et. al. (2020), Neurosci Res 154, 27-34
doi: 10.1016/j.neures.2019.05.004
pmid: 31226269
Project 192-Hiroshima-SingleMolDyn
Release, Updated 2022-03-31
Organism(s) Cricetulus griseus
DataType(s) epidermal growth factor receptor binding
# of image datasets 60
# of quantitative datasets 0
Paper information Hiroshima M et. al. (2020), Microscopy (Oxf) 69(2), 69-78
doi: 10.1093/jmicro/dfz116
pmid: 32090254
Project 194-Obashi-SpineDyn
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) signaling molecule, NA
# of image datasets 21
# of quantitative datasets 0
Paper information Obashi K et. al. (2019), Cell Rep 27(5), 1503-1515.e8
doi: 10.1016/j.celrep.2019.04.006
pmid: 31042476
Project 196-Sueda-GeneExpReg
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) gene expression, regulation of gene expression
# of image datasets 24
# of quantitative datasets 0
Paper information Sueda R et. al. (2019), Genes Dev 33(9-10), 511-523
doi: 10.1101/gad.323196.118
pmid: 30862661
Project 202-Miyagawa-ChemotaxisDyn
Release, Updated 2022-03-31
Organism(s) Dictyostelium discoideum
DataType(s) chemotaxis
# of image datasets 4
# of quantitative datasets 0
Paper information Miyagawa T et. al. (2018), Nat Commun 9(1), 4635
doi: 10.1038/s41467-018-07035-x
pmid: 30401901
Project 203-Tanabe-SingleDyn
Release, Updated 2022-03-31
Organism(s) Dictyostelium discoideum
DataType(s) cAMP binding
# of image datasets 11
# of quantitative datasets 0
Paper information Tanabe Y et. al. (2018), J Cell Sci 131(23)
doi: 10.1242/jcs.214775
pmid: 30404836
Project 205-Shen-CellPatterning
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) -
# of image datasets 5
# of quantitative datasets 0
Paper information Shen Y et. al. (2020), PLoS One 15(5), e0232518
doi: 10.1371/journal.pone.0232518
pmid: 32433673
Project 206-Miyamoto-CiliaryMorphology
Release, Updated 2022-03-31
Organism(s) Homo sapiens
DataType(s) peroxisome, ciliary pocket membrane
# of image datasets 1
# of quantitative datasets 0
Paper information Miyamoto T et. al. (2020), EMBO J 39(12), e103499
doi: 10.15252/embj.2019103499
pmid: 32368833
Project 207-Kuroda-FinMorphology
Release, Updated 2022-03-31
Organism(s) Danio rerio
DataType(s) basement membrane
# of image datasets 1
# of quantitative datasets 0
Paper information Kuroda J et. al. (2020), Front Cell Dev Biol 8, 580520
doi: 10.3389/fcell.2020.580520
pmid: 33154970
Project 211-Hiroshima-EGFRTracking
Release, Updated 2022-03-31
Organism(s) Cricetulus griseus
DataType(s) epidermal growth factor receptor binding, epidermal growth factor-activated receptor activity
# of image datasets 12
# of quantitative datasets 0
Paper information Hiroshima M et. al. (2018), J Mol Biol 430(9), 1386-1401
doi: 10.1016/j.jmb.2018.02.018
pmid: 29505756
Project 212-Kajikawa-GeckoEmbryos
Release, Updated 2022-03-31
Organism(s) Gekko
DataType(s) left/right axis specification
# of image datasets 3
# of quantitative datasets 0
Paper information Kajikawa E et. al. (2020), Nat Ecol Evol 4(2), 261-269
doi: 10.1038/s41559-019-1072-2
pmid: 31907383
Project 213-Yoshida-SpindleDyn
Release, Updated 2022-03-31
Organism(s) Mus musculus
DataType(s) meiosis I nuclear membrane disassembly
# of image datasets 16
# of quantitative datasets 0
Paper information Yoshida S et. al. (2020), Nat Commun 11(1), 2652
doi: 10.1038/s41467-020-16488-y
pmid: 32461611
Project 217-Sakai-iRFPactivity SSBD:repository:
ssbd-repos-000217
Release, Updated 2022-03-31
Organism(s) Saccharomyces cerevisiae, Schizosaccharomyces pombe
DataType(s) biliverdin reductase (NAD(P)+) activity
# of image datasets 8
# of quantitative datasets 0
Paper information Sakai K et. al. (2021), J Cell Sci 134(24)
doi: 10.1242/jcs.259315
pmid: 34806750
Project 72-Kyogoku-CytoplasmNucDyn
Release, Updated 2021-11-30
Organism(s) Mus musculus
DataType(s) mitotic cell cycle, nuclear envelope breakdown, cytoplasm organization
# of image datasets 453
# of quantitative datasets 0
Paper information Kyogoku H and Kitajima TS (2017), Dev Cell 41(3), 287-298.e4
doi: 10.1016/j.devcel.2017.04.009
pmid: 28486131
Project 70-Yoshida-KTMTDyn
Release, Updated 2021-09-30
Organism(s) Mus musculus
DataType(s) mitotic cell cycle
# of image datasets 265
# of quantitative datasets 0
Paper information Yoshida S et. al. (2015), Dev Cell 33(5), 589-602
doi: 10.1016/j.devcel.2015.04.020
pmid: 26028219
Project 120-Ding-CentromericDyn
Release, Updated 2021-09-30
Organism(s) M. musculus
DataType(s) centromeric sister chromatid cohesion, meiotic cell cycle
# of image datasets 351
# of quantitative datasets 0
Paper information Ding Y et. al. (2018), Curr Biol 28(10), 1661-1669.e4
doi: 10.1016/j.cub.2018.04.019
pmid: 29754905
Project 126-Imanishi-CellMorNuCyM
Release, Updated 2021-09-30
Organism(s) Mus musculus
DataType(s) plasma membrane
# of image datasets 46
# of quantitative datasets 0
Paper information Imanishi A et. al. (2018), Cell Struct Funct 43(2), 129-140
doi: 10.1247/csf.18013
pmid: 29962383
Project 127-Konishi-ERKDyn
Release, Updated 2021-09-30
Organism(s) Mus musculus
DataType(s) activation of MAPERK kinase, cell motility
# of image datasets 143
# of quantitative datasets 0
Paper information Konishi Y et. al. (2018), iScience 10, 98-113
doi: 10.1016/j.isci.2018.11.025
pmid: 30508722
Project 128-Muta-IECsERKDyn
Release, Updated 2021-09-30
Organism(s) Mus musculus
DataType(s) activation of MAPERK kinase, ERBB2-EGFR signaling pathway, epidermal growth factor signaling pathway, ERBB2 signaling pathway
# of image datasets 470
# of quantitative datasets 0
Paper information Muta Y et. al. (2018), Nat Commun 9(1), 2174
doi: 10.1038/s41467-018-04527-8
pmid: 29872037
Project 129-Komatsu-ERKBiosensorActivity
Release, Updated 2021-09-30
Organism(s) Mus musculus
DataType(s) activation of MAPERK kinase
# of image datasets 13
# of quantitative datasets 0
Paper information Komatsu N et. al. (2018), Sci Rep 8(1), 8984
doi: 10.1038/s41598-018-27174-x
pmid: 29895862
Project 130-Sano-CellMigrationDyn
Release, Updated 2021-09-30
Organism(s) Mus musculus
DataType(s) activation of MAPERK kinase, cell migration
# of image datasets 26
# of quantitative datasets 0
Paper information Sano T et. al. (2018), Am J Pathol 188(11), 2564-2573
doi: 10.1016/j.ajpath.2018.07.010
pmid: 30121259
Project 161-Tanaka-MEFMitochondrial
Release, Updated 2021-09-30
Organism(s) Mus musculus
DataType(s) gene expression
# of image datasets 4
# of quantitative datasets 0
Paper information Tanaka H et. al. (2019), J Cell Sci 132(11)
doi: 10.1242/jcs.224766
pmid: 31076512
Project 165-Kinjo-ERKactivity
Release, Updated 2021-09-30
Organism(s) Canis lupus familiaris, Mus musculus
DataType(s) extracellular signal-regulated kinase activity
# of image datasets 20
# of quantitative datasets 0
Paper information Kinjo T et. al. (2019), Nat Methods 16(10), 1029-1036
doi: 10.1038/s41592-019-0541-5
pmid: 31501546
Project 166-Takubo-ECsTrajectory
Release, Updated 2021-09-30
Organism(s) Mus musculus
DataType(s) endothelial cell morphogenesis
# of image datasets 5
# of quantitative datasets 4
Paper information Takubo N et. al. (2019), Sci Rep 9(1), 9304
doi: 10.1038/s41598-019-45666-2
pmid: 31243314
Project 171-Ochi-Hes1DynNPCs
Release, Updated 2021-09-30
Organism(s) Mus musculus
DataType(s) translation activator activity
# of image datasets 3
# of quantitative datasets 0
Paper information Ochi S et. al. (2020), Development 147(4)
doi: 10.1242/dev.182204
pmid: 32094111
Project 134-Tanaka-SalivaryglandDev
Release, Updated 2020-12-23
Organism(s) Mus musculus
DataType(s) organogenesis
# of image datasets 55
# of quantitative datasets 0
Paper information Tanaka J et. al. (2018), Nat Commun 9(1), 4216
doi: 10.1038/s41467-018-06469-7
pmid: 30310071
Project 142-Wen-CellShape
Release, Updated 2020-12-23
Organism(s) Drosophila
DataType(s) ventral furrow formation, mesodermal cell migration
# of image datasets 4
# of quantitative datasets 4
Paper information Wen FL et. al. (2017), Biophys J 112(12), 2683-2695
doi: 10.1016/j.bpj.2017.05.012
pmid: 28636924
Project 150-Abe-SomiteDev
Release, Updated 2020-12-23
Organism(s) Oryzias
DataType(s) somite development
# of image datasets 18
# of quantitative datasets 0
Paper information Abe K et. al. (2019), Cell Rep 27(3), 928-939.e4
doi: 10.1016/j.celrep.2019.03.068
pmid: 30995487
Project 42-Hayashi-NeuronalCellDyn SSBD:repository:
Rno_NEU_OY
Release, Updated 2019-11-20
Organism(s) Rattus novegicus
DataType(s) neuron cell dynamics
# of image datasets 0
# of quantitative datasets 198
Paper information Hayashi K et. al. (2018), Mol Biol Cell 29(25), 3017-3025
doi: 10.1091/mbc.E18-01-0022
pmid: 30281391
Project 66-Iwata-CellDynOSNMT SSBD:repository:
66-Iwata-CellDynOSNMT
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) calcium imaging data
# of image datasets 2403
# of quantitative datasets 0
Paper information Iwata R et. al. (2017), Neuron 96(5), 1139-1152.e7
doi: 10.1016/j.neuron.2017.11.008
pmid: 29216451
Project 68-Sakaguchi-NeuronFluo SSBD:repository:
68-Sakaguchi-NeuronFluo
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) neuronal morphology
# of image datasets 67
# of quantitative datasets 0
Paper information Sakaguchi R et. al. (2018), Elife 7
doi: 10.7554/eLife.40350
pmid: 30454553
Project 86-Higashi-SynapseDyn
Release, Updated 2019-11-20
Organism(s) Mus musculus
DataType(s) synapse dynamics
# of image datasets 16
# of quantitative datasets 0
Paper information Higashi T et. al. (2018), Cell Rep 22(4), 919-929
doi: 10.1016/j.celrep.2017.12.101
pmid: 29386134
Project 94-Matsuda-Beetlehorn
Release, Updated 2019-11-20
Organism(s) Trypoxylus dichotomus
DataType(s) horn primordia dynamic
# of image datasets 5
# of quantitative datasets 0
Paper information Matsuda K et. al. (2017), Sci Rep 7(1), 13939
doi: 10.1038/s41598-017-14170-w
pmid: 29066748
Project 98-Morita-ToothEpiCellDyn
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) tooth epithelium deformation
# of image datasets 5
# of quantitative datasets 1
Paper information Morita R et. al. (2016), PLoS One 11(9), e0161336
doi: 10.1371/journal.pone.0161336
pmid: 27588418
Project 99-Takagi-HairRegiPSCell
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) hair regeneration
# of image datasets 6
# of quantitative datasets 0
Paper information Takagi R et. al. (2016), Sci Adv 2(4), e1500887
doi: 10.1126/sciadv.1500887
pmid: 27051874
Project 100-Yamamoto-ToothDev
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) tooth dynamics
# of image datasets 7
# of quantitative datasets 0
Paper information Yamamoto N et. al. (2015), Sci Rep 5, 18393
doi: 10.1038/srep18393
pmid: 26673152
Project 101-Oshima-ToothBioImplant
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) tissue structure
# of image datasets 8
# of quantitative datasets 0
Paper information Oshima M et. al. (2014), Sci Rep 4, 6044
doi: 10.1038/srep06044
pmid: 25116435
Project 102-Ogawa-SalivaryGlandDev
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) generation of salivary gland
# of image datasets 6
# of quantitative datasets 0
Paper information Ogawa M et. al. (2013), Nat Commun 4, 2498
doi: 10.1038/ncomms3498
pmid: 24084982
Project 103-Hirayama-GlandReg
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) gland regeneration
# of image datasets 24
# of quantitative datasets 0
Paper information Hirayama M et. al. (2013), Nat Commun 4, 2497
doi: 10.1038/ncomms3497
pmid: 24084941
Project 104-Bin-SkinImmuno
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) immnocytochemistry of skin
# of image datasets 5
# of quantitative datasets 0
Paper information Bin BH et. al. (2017), Proc Natl Acad Sci U S A 114(46), 12243-12248
doi: 10.1073/pnas.1710726114
pmid: 29078349
Project 105-Ono-ToothDev
Release, Updated 2019-11-20
Organism(s) Canis lupus familiaris
DataType(s) tooth development
# of image datasets 9
# of quantitative datasets 0
Paper information Ono M et. al. (2017), Sci Rep 7, 44522
doi: 10.1038/srep44522
pmid: 28300208
Project 108-Sugita-RPEiPSCell
Release, Updated 2019-11-20
Organism(s) M. fascicularis
DataType(s) cell dynamics
# of image datasets 9
# of quantitative datasets 0
Paper information Sugita S et. al. (2017), Stem Cell Reports 9(5), 1501-1515
doi: 10.1016/j.stemcr.2017.10.003
pmid: 29103970
Project 109-Mandai-RPEiPSCell
Release, Updated 2019-11-20
Organism(s) H. sapiens
DataType(s) iPS derived retinal pigment epithelial cell sheet
# of image datasets 15
# of quantitative datasets 0
Paper information Mandai M et. al. (2017), N Engl J Med 376(11), 1038-1046
doi: 10.1056/NEJMoa1608368
pmid: 28296613
Project 111-Kawaguchi-NPCellsDyn
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) cell dynamics
# of image datasets 30
# of quantitative datasets 2
Paper information Kawaguchi K et. al. (2017), Nature 545(7654), 327-331
doi: 10.1038/nature22321
pmid: 28403137
Project 113-Kamioka-CellDyn
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) Cell dynamics, ERK activation by FRET
# of image datasets 5
# of quantitative datasets 0
Paper information Kamioka Y et. al. (2017), Cancer Sci 108(2), 226-235
doi: 10.1111/cas.13132
pmid: 27960041
Project 114-Shiura-MouseEmbryoDyn SSBD:repository:
114-Shiura-MouseEmbryoDyn
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) X chromosome inactivation (XCI) dynamics
# of image datasets 179
# of quantitative datasets 0
Paper information Shiura H and Abe K (2019), Sci Rep 9(1), 3637
doi: 10.1038/s41598-019-38807-0
pmid: 30842444
Project 115-Nabeshima-DuodenumVilliCell
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) transgene expression
# of image datasets 3
# of quantitative datasets 0
Paper information Nabeshima R et. al. (2018), Elife 7
doi: 10.7554/eLife.36435
pmid: 30070635
Project 116-Yamada-Glycogen
Release, Updated 2019-11-20
Organism(s) Drosophila
DataType(s) tissuel immunostaining
# of image datasets 12
# of quantitative datasets 0
Paper information Yamada T et. al. (2018), Development 145(6)
doi: 10.1242/dev.158865
pmid: 29467247
Project 118-Iraha-hESCRetina
Release, Updated 2019-11-20
Organism(s) H. sapiens
DataType(s) tissue morphology
# of image datasets 4
# of quantitative datasets 0
Paper information Iraha S et. al. (2018), Stem Cell Reports 10(3), 1059-1074
doi: 10.1016/j.stemcr.2018.01.032
pmid: 29503091
Project 119-Sakashita-FishVertebrae SSBD:repository:
119-Sakashita-FishVertebrae
Release, Updated 2019-11-20
Organism(s) S. japonica, S. oblongus, R. prometheoides, S. zonatus, M. sagifue, T. snyderi, T. tonggol, P. major, S. pinguis, P. altivelis altivelis, P. olivaceus, T. stictonotus, H. hilgendorfii, C. saira, T. orientalis, A. hanedai, H. dubius, S. forsteni, M. uradoi, Z. nebulosa, C. spinosus, C. abei, M. cinereus, H. typus, T. japonicus, S. japonicus, K. punctatus, T. pardalis, L. setigerus, L. litulon, Z. faber, S. melanostictus
DataType(s) vertebral bodies of teleost fish
# of image datasets 141
# of quantitative datasets 0
Paper information Sakashita M et. al. (2019), J Morphol 280(6), 778-795
doi: 10.1002/jmor.20983
pmid: 30945336
Project 121-Inoue-SingleCellDyn
Release, Updated 2019-11-20
Organism(s) Mus musculus
DataType(s) single cell dynamics
# of image datasets 29
# of quantitative datasets 0
Paper information Inoue H et. al. (2018), Cell Struct Funct 43(2), 153-169
doi: 10.1247/csf.18012
pmid: 30047513
Project 123-Yalikun-ZygoteDyn
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) zygote rotation
# of image datasets 2
# of quantitative datasets 0
Paper information Yalikun, Yaxiaer et. al. (2018), Micro & Nano Letters 13(3), 306-311
doi: 10.1049/mnl.2017.0731
Project 124-Ueda-miPSRetina
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) retina differentiation
# of image datasets 31
# of quantitative datasets 0
Paper information Ueda K et. al. (2018), Biochem Biophys Res Commun 495(4), 2595-2601
doi: 10.1016/j.bbrc.2017.12.092
pmid: 29274337
Project 125-Gessesse-CX3CR1nanodisc
Release, Updated 2019-11-20
Organism(s) -
DataType(s) protein analysis
# of image datasets 1
# of quantitative datasets 0
Paper information Gessesse B et. al. (2018), Life (Basel) 8(4)
doi: 10.3390/life8040054
pmid: 30400226
Project 132-Goto-CellMor
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) Electron micrographs
# of image datasets 12
# of quantitative datasets 0
Paper information Goto S et. al. (2018), Elife 7
doi: 10.7554/eLife.32358
pmid: 29609731
Project 135-Maruyama-LymVesselImmuno
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) Immunostaining
# of image datasets 17
# of quantitative datasets 0
Paper information Maruyama K et. al. (2019), Dev Biol 452(2), 134-143
doi: 10.1016/j.ydbio.2019.05.002
pmid: 31112709
Project 136-Matsumiya-ESCellDyn
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) Hes7 expression dynamics
# of image datasets 9
# of quantitative datasets 0
Paper information Matsumiya M et. al. (2018), Development 145(4)
doi: 10.1242/dev.156836
pmid: 29437832
Project 141-Sato-CellMorphology
Release, Updated 2019-11-20
Organism(s) M. musculus
DataType(s) synapse morphology
# of image datasets 17
# of quantitative datasets 0
Paper information Sato Y and Okabe S (2019), Microscopy (Oxf) 68(2), 122-132
doi: 10.1093/jmicro/dfy128
pmid: 30371805
Project 73-Fujii-NeuronalMolDynCa2
Release, Updated 2018-11-15
Organism(s) -
DataType(s) molecular dynamics
# of image datasets 0
# of quantitative datasets 100
Paper information Fujii M et. al. (2017), Biophys J 112(4), 813-826
doi: 10.1016/j.bpj.2016.12.043
pmid: 28256240
Project 76-Tanaka-MuscleDyn
Release, Updated 2018-11-15
Organism(s) M. sieboldi
DataType(s) Muscle dynamics
# of image datasets 0
# of quantitative datasets 2
Paper information Tanaka, Yo et. al. (2017), Sensors and Actuators B: Chemical 242, 1186-1192
doi: 10.1016/j.snb.2016.09.123
Project 47-Noguchi-CellDyn
Release, Updated 2018-11-14
Organism(s) M. musculus
DataType(s) cell dynamics
# of image datasets 38
# of quantitative datasets 0
Paper information Noguchi M et. al. (2015), Cell Rep 13(12), 2679-86
doi: 10.1016/j.celrep.2015.11.058
pmid: 26711336
Project 55-Maekawa-ESCellDyn
Release, Updated 2018-11-14
Organism(s) M. musculus
DataType(s) tissue structure
# of image datasets 2
# of quantitative datasets 0
Paper information Maekawa Y et. al. (2016), Curr Eye Res 41(4), 558-68
doi: 10.3109/02713683.2015.1038359
pmid: 25880804
Project 57-Herawati-CellDyn
Release, Updated 2018-11-14,
2020-02-03
Organism(s) M. musculus
DataType(s) epithelial cells dynamics
# of image datasets 23
# of quantitative datasets 1
Paper information Herawati E et. al. (2016), J Cell Biol 214(5), 571-86
doi: 10.1083/jcb.201601023
pmid: 27573463
Project 59-Yano-MicrotubuleImmuno
Release, Updated 2018-11-14
Organism(s) M. musculus
DataType(s) Microtubule immunofluorescence
# of image datasets 1
# of quantitative datasets 0
Paper information Yano T et. al. (2013), J Cell Biol 203(4), 605-14
doi: 10.1083/jcb.201304194
pmid: 24385485
Project 74-Bansod-NSCellHes5
Release, Updated 2018-11-14
Organism(s) M. musculus
DataType(s) cell dynamics
# of image datasets 64
# of quantitative datasets 0
Paper information Bansod S et. al. (2017), Development 144(17), 3156-3167
doi: 10.1242/dev.147256
pmid: 28851724
Project 75-Minegishi-NodeCell
Release, Updated 2018-11-14
Organism(s) M. musculus
DataType(s) cell tissue
# of image datasets 4
# of quantitative datasets 0
Paper information Minegishi K et. al. (2017), Dev Cell 40(5), 439-452.e4
doi: 10.1016/j.devcel.2017.02.010
pmid: 28292423
Project 77-Aoki-CellDynERK
Release, Updated 2018-11-14
Organism(s) Canis lupus familiaris
DataType(s) cell dynamics
# of image datasets 14
# of quantitative datasets 2
Paper information Aoki K et. al. (2017), Dev Cell 43(3), 305-317.e5
doi: 10.1016/j.devcel.2017.10.016
pmid: 29112851
Project 78-Takagi-CellDyn
Release, Updated 2018-11-14
Organism(s) H. sapiens
DataType(s) cell dynamics
# of image datasets 8
# of quantitative datasets 0
Paper information Takagi S et. al. (2017), Clin Ophthalmol 11, 1219-1225
doi: 10.2147/OPTH.S134338
pmid: 28721006
Project 79-Inomata-HeLaCell
Release, Updated 2018-11-14
Organism(s) H. sapiens
DataType(s) intracellular structure
# of image datasets 8
# of quantitative datasets 0
Paper information Inomata K et. al. (2017), Chem Commun (Camb) 53(81), 11245-11248
doi: 10.1039/c7cc06004a
pmid: 28960222
Project 81-Yasugi-DmeCellDyn
Release, Updated 2018-11-14
Organism(s) D. melanogaster
DataType(s) LysoTracker-positive vesicle, nucleus
# of image datasets 4
# of quantitative datasets 0
Paper information Yasugi T et. al. (2017), Sci Rep 7(1), 1619
doi: 10.1038/s41598-017-01754-9
pmid: 28487555
Project 82-Ikeda-GeneExp
Release, Updated 2018-11-14
Organism(s) M. musculus
DataType(s) gene expression
# of image datasets 9
# of quantitative datasets 0
Paper information Ikeda T et. al. (2018), Nat Commun 9(1), 1387
doi: 10.1038/s41467-018-03748-1
pmid: 29643333
Project 83-Fumoto-LungDevWnt
Release, Updated 2018-11-14
Organism(s) M. musculus
DataType(s) organ formation
# of image datasets 18
# of quantitative datasets 0
Paper information Fumoto K et. al. (2017), Development 144(1), 151-162
doi: 10.1242/dev.141325
pmid: 27913639
Project 84-Ito-CellDyn
Release, Updated 2018-11-14
Organism(s) H. sapiens
DataType(s) cell dynamics
# of image datasets 7
# of quantitative datasets 0
Paper information Ito S et. al. (2017), Nat Commun 8(1), 1834
doi: 10.1038/s41467-017-01945-y
pmid: 29184140
Project 85-Kosodo-NeuralballDyn
Release, Updated 2018-11-14
Organism(s) M. musculus
DataType(s) Dynamics of neural ball shape and neural differentiation
# of image datasets 3
# of quantitative datasets 0
Paper information Kosodo Y et. al. (2017), Biochem Biophys Res Commun 483(1), 94-100
doi: 10.1016/j.bbrc.2016.12.187
pmid: 28063930
Project 87-CorneliaKoeverle-SpineDyn
Release, Updated 2018-11-14
Organism(s) M. musculus
DataType(s) spine dynamics
# of image datasets 30
# of quantitative datasets 2
Paper information Cornelia Koeberle S et. al. (2017), Sci Rep 7(1), 13409
doi: 10.1038/s41598-017-13728-y
pmid: 29042611
Project 89-Isshiki-SpineDyn
Release, Updated 2018-11-14
Organism(s) M. musculus
DataType(s) spine dynamics
# of image datasets 40
# of quantitative datasets 0
Paper information Isshiki M et. al. (2014), Nat Commun 5, 4742
doi: 10.1038/ncomms5742
pmid: 25144834
Project 90-Ishiwata-SpindleDyn
Release, Updated 2018-11-14
Organism(s) H. sapiens, X. laevis
DataType(s) spindle dynamics
# of image datasets 3
# of quantitative datasets 0
Paper information Ishiwata, Shin'ichi et. al. (2017), Molecular Crystals and Liquid Crystals 647(1), 127-150
doi: 10.1080/15421406.2017.1289445
Project 91-Konagaya-AMPKactivity
Release, Updated 2018-11-14
Organism(s) M. musculus, H. sapiens
DataType(s) Cell dynamic
# of image datasets 6
# of quantitative datasets 0
Paper information Konagaya Y et. al. (2017), Cell Rep 21(9), 2628-2638
doi: 10.1016/j.celrep.2017.10.113
pmid: 29186696
Project 92-Uda-CellsigDyn
Release, Updated 2018-11-14
Organism(s) H. sapiens
DataType(s) cell signaling dynamics
# of image datasets 21
# of quantitative datasets 0
Paper information Uda Y et. al. (2017), Proc Natl Acad Sci U S A 114(45), 11962-11967
doi: 10.1073/pnas.1707190114
pmid: 29078307
Project 95-Nojima-CellMorphology
Release, Updated 2018-11-14
Organism(s) M. musculus, H. sapiens
DataType(s) cell morphology
# of image datasets 114
# of quantitative datasets 0
Paper information Nojima S et. al. (2017), Sci Rep 7(1), 9269
doi: 10.1038/s41598-017-09117-0
pmid: 28839164
Project 96-Kamimura-ChemotaxisDyn
Release, Updated 2018-11-14
Organism(s) D. discoideum AX2
DataType(s) dynamic of eukaryotic chemotaxis
# of image datasets 5
# of quantitative datasets 0
Paper information Kamimura Y et. al. (2016), Proc Natl Acad Sci U S A 113(16), 4356-61
doi: 10.1073/pnas.1516767113
pmid: 27044073
Project 106-Jin-BreastTumorFlu
Release, Updated 2018-11-14
Organism(s) M. musculus
DataType(s) breast tumor fluorescence
# of image datasets 8
# of quantitative datasets 0
Paper information Jin, Takashi et. al. (2016), Med. Chem. Commun. 7(4), 623-631
doi: 10.1039/C5MD00580A
Project 107-Tsuboi-BreastTumorFlu
Release, Updated 2018-11-14
Organism(s) M. musculus
DataType(s) breast tumor fluorescence
# of image datasets 13
# of quantitative datasets 0
Paper information Tsuboi S et. al. (2017), Chem Commun (Camb) 53(68), 9450-9453
doi: 10.1039/c7cc04966h
pmid: 28795717
Project 110-Makino-MembraneDyn
Release, Updated 2018-11-14
Organism(s) H. sapiens
DataType(s) membrane nakanori distribution
# of image datasets 10
# of quantitative datasets 0
Paper information Makino A et. al. (2017), FASEB J 31(4), 1301-1322
doi: 10.1096/fj.201500075R
pmid: 27492925
Project 21-Yasui-MolDynPTEN
Release, Updated 2017-10-03,
2018-11-15
Organism(s) D. discoideum
DataType(s) single molecule dynamics
# of image datasets 13
# of quantitative datasets 0
Paper information Yasui M et. al. (2014), PLoS Comput Biol 10(9), e1003817
doi: 10.1371/journal.pcbi.1003817
pmid: 25211206
Project 22-Kondo-CellDyn
Release, Updated 2017-10-03,
2018-11-15
Organism(s) D. melanogaster
DataType(s) cell dynamics
# of image datasets 16
# of quantitative datasets 0
Paper information Kondo T and Hayashi S (2013), Nature 494(7435), 125-9
doi: 10.1038/nature11792
pmid: 23334416
Project 23-Shirai-ESCellTissue
Release, Updated 2017-10-03,
2018-11-15
Organism(s) H. sapiens
DataType(s) tissue structure
# of image datasets 2
# of quantitative datasets 0
Paper information Shirai H et. al. (2016), Proc Natl Acad Sci U S A 113(1), E81-90
doi: 10.1073/pnas.1512590113
pmid: 26699487
Project 24-Kanemura-iPSCellDyn
Release, Updated 2017-10-03,
2018-11-15
Organism(s) H. sapiens
DataType(s) cell dynamics
# of image datasets 4
# of quantitative datasets 0
Paper information Kanemura H et. al. (2013), Sci Rep 3, 2334
doi: 10.1038/srep02334
pmid: 23903667
Project 25-Ke-SeeDB
Release, Updated 2017-10-03,
2017-11-15
Organism(s) M. musculus
DataType(s) neuron structure
# of image datasets 52
# of quantitative datasets 0
Paper information Ke MT et. al. (2013), Nat Neurosci 16(8), 1154-61
doi: 10.1038/nn.3447
pmid: 23792946
Project 26-Kinoshita-iPSCellDyn
Release, Updated 2017-10-03,
2018-11-15
Organism(s) M. musculus
DataType(s) cell dynamics
# of image datasets 2
# of quantitative datasets 0
Paper information Kinoshita H et. al. (2016), Invest Ophthalmol Vis Sci 57(1), 153-61
doi: 10.1167/iovs.15-17610
pmid: 26780319
Project 27-Iwasaki-iPSCellDyn
Release, Updated 2017-10-03,
2018-11-15
Organism(s) M. musculus
DataType(s) cell/tissue structure
# of image datasets 13
# of quantitative datasets 0
Paper information Iwasaki Y et. al. (2016), PLoS One 11(7), e0158282
doi: 10.1371/journal.pone.0158282
pmid: 27385038
Project 28-Assawachananont-iPSCellTissue
Release, Updated 2017-10-03,
2018-11-15
Organism(s) M. musculus
DataType(s) tissue structure
# of image datasets 8
# of quantitative datasets 0
Paper information Assawachananont J et. al. (2014), Stem Cell Reports 2(5), 662-74
doi: 10.1016/j.stemcr.2014.03.011
pmid: 24936453
Project 29-Ke-SeeDB2
Release, Updated 2017-10-03,
2018-11-15
Organism(s) M. musculus, D. melanogaster, H. sapiens
DataType(s) neuron structure
# of image datasets 58
# of quantitative datasets 0
Paper information Ke MT et. al. (2016), Cell Rep 14(11), 2718-32
doi: 10.1016/j.celrep.2016.02.057
pmid: 26972009
Project 30-Inomata-CellDyn
Release, Updated 2017-10-03,
2018-11-15
Organism(s) X. laevis
DataType(s) cell dynamics
# of image datasets 5
# of quantitative datasets 0
Paper information Inomata H et. al. (2013), Cell 153(6), 1296-311
doi: 10.1016/j.cell.2013.05.004
pmid: 23746842
Project 31-Matsuda-SigDyn
Release, Updated 2017-10-03,
2018-11-15
Organism(s) C. l. familiaris, C. griseus
DataType(s) cell dynamics
# of image datasets 3
# of quantitative datasets 0
Paper information Matsuda M et. al. (2012), Sci Signal 5(220), ra31
doi: 10.1126/scisignal.2002764
pmid: 22510469
Project 32-Matsuda-SigDyn
Release, Updated 2017-10-03,
2018-11-15
Organism(s) C. griseus
DataType(s) cell dynamics
# of image datasets 2
# of quantitative datasets 0
Paper information Matsuda M et. al. (2015), Nat Commun 6, 6195
doi: 10.1038/ncomms7195
pmid: 25652697
Project 33-Yamao-MolDynRho
Release, Updated 2017-10-03,
2018-11-15
Organism(s) H. sapiens
DataType(s) cell dynamics
# of image datasets 19
# of quantitative datasets 0
Paper information Yamao M et. al. (2015), Sci Rep 5, 17527
doi: 10.1038/srep17527
pmid: 26634649
Project 34-Hayashi-CellDynSDSRM
Release, Updated 2017-10-03,
2018-11-15
Organism(s) C. l. familiaris
DataType(s) organelle dynamics
# of image datasets 3
# of quantitative datasets 0
Paper information Hayashi S and Okada Y (2015), Mol Biol Cell 26(9), 1743-51
doi: 10.1091/mbc.E14-08-1287
pmid: 25717185
Project 35-Yonemura-CellDyn
Release, Updated 2017-10-03,
2018-11-15
Organism(s) M. musculus, C. l. familiaris, H. sapiens
DataType(s) cell dynamics
# of image datasets 3
# of quantitative datasets 0
Paper information Yonemura S (2014), PLoS One 9(11), e112922
doi: 10.1371/journal.pone.0112922
pmid: 25393292
Project 36-Torisawa-MolDynEg5
Release, Updated 2017-10-03,
2018-11-15
Organism(s) -
DataType(s) microtubule dynamics
# of image datasets 3
# of quantitative datasets 0
Paper information Torisawa T et. al. (2016), Biophys J 111(2), 373-385
doi: 10.1016/j.bpj.2016.06.010
pmid: 27463139
Project 37-Arata-MolDynPar2
Release, Updated 2017-10-03,
2020-02-03
Organism(s) C. elegans
DataType(s) single molecule dynamics
# of image datasets 3
# of quantitative datasets 3
Paper information Arata Y et. al. (2016), Cell Rep 16(8), 2156-2168
doi: 10.1016/j.celrep.2016.07.047
pmid: 27524610
Project 38-Inoue-ShellStruct
Release, Updated 2017-10-03,
2017-11-15
Organism(s) D. cf. damesi (NA)
DataType(s) strucure
# of image datasets 7
# of quantitative datasets 0
Paper information Inoue S and Kondo S (2016), Sci Rep 6, 33689
doi: 10.1038/srep33689
pmid: 27640361
Project 39-Shibata-MolDynPTEN
Release, Updated 2017-10-03,
2018-11-15
Organism(s) D. discoideum
DataType(s) cell dynamics
# of image datasets 2
# of quantitative datasets 2
Paper information Shibata T et. al. (2012), J Cell Sci 125(Pt 21), 5138-50
doi: 10.1242/jcs.108373
pmid: 22899720
Project 40-Sakakibara-KTDyn
Release, Updated 2017-10-03,
2018-11-15
Organism(s) M. musculus
DataType(s) kinetochore dynamics
# of image datasets 3
# of quantitative datasets 1
Paper information Sakakibara Y et. al. (2015), Nat Commun 6, 7550
doi: 10.1038/ncomms8550
pmid: 26130582
Project 41-Hirata-XChrHiC
Release, Updated 2017-10-03,
2018-11-15
Organism(s) M. musculus
DataType(s) chromosome structure
# of image datasets 0
# of quantitative datasets 11
Paper information Hirata Y et. al. (2016), Sci Rep 6, 34982
doi: 10.1038/srep34982
pmid: 27725694
Project 43-Takai-SubcellStructONL
Release, Updated 2017-10-03,
2018-11-15
Organism(s) C. l. familiaris
DataType(s) lysosomes dynamics, peroxisomes dynamics
# of image datasets 2
# of quantitative datasets 2
Paper information Takai A et. al. (2015), Proc Natl Acad Sci U S A 112(14), 4352-6
doi: 10.1073/pnas.1418468112
pmid: 25831507
Project 44-Hihara-NucleosomeDyn
Release, Updated 2017-10-03,
2018-11-15
Organism(s) -
DataType(s) single molecule dynamics
# of image datasets 0
# of quantitative datasets 3
Paper information Hihara S et. al. (2012), Cell Rep 2(6), 1645-56
doi: 10.1016/j.celrep.2012.11.008
pmid: 23246002
Project 48-Susaki-MouseBrainCUBIC
Release, Updated 2017-10-03,
2018-11-15
Organism(s) M. musculus
DataType(s) organ structure
# of image datasets 27
# of quantitative datasets 0
Paper information Susaki EA et. al. (2014), Cell 157(3), 726-39
doi: 10.1016/j.cell.2014.03.042
pmid: 24746791
Project 49-Susaki-MouseBrainCUBIC
Release, Updated 2017-10-03,
2018-11-15
Organism(s) M. musculus
DataType(s) organ structure
# of image datasets 1
# of quantitative datasets 0
Paper information Susaki EA et. al. (2015), Nat Protoc 10(11), 1709-27
doi: 10.1038/nprot.2015.085
pmid: 26448360
Project 50-Tainaka-MouseBodyCUBIC
Release, Updated 2017-10-03,
2018-11-15
Organism(s) M. musculus
DataType(s) organ structure
# of image datasets 40
# of quantitative datasets 0
Paper information Tainaka K et. al. (2014), Cell 159(4), 911-24
doi: 10.1016/j.cell.2014.10.034
pmid: 25417165
Project 52-Suzuki-FrogTailDyn
Release, Updated 2017-10-03
Organism(s) X. laevis
DataType(s) cell dynamics
# of image datasets 1
# of quantitative datasets 0
Paper information Suzuki M et. al. (2016), Genes Cells 21(4), 358-69
doi: 10.1111/gtc.12349
pmid: 26914410
Project 53-Ichimura-CellDyn
Release, Updated 2017-10-03
Organism(s) M. musculus
DataType(s) cell dynamics
# of image datasets 4
# of quantitative datasets 0
Paper information Ichimura T et. al. (2016), Sci Rep 6, 37562
doi: 10.1038/srep37562
pmid: 27876845
Project 20-Azuma-WormMembrane SSBD:repository:
20-Azuma-WormMembrane
Release, Updated 2017-03-01,
2017-11-15
Organism(s) C. elegans
DataType(s) cellular dynamics
# of image datasets 1
# of quantitative datasets 1
Paper information Azuma Y and Onami S (2017), BMC Bioinformatics 18(1), 307
doi: 10.1186/s12859-017-1717-6
pmid: 28629355
Project 12-Takayama-Oocyte
Release, Updated 2016-10-03,
2020-02-03
Organism(s) C. elegans
DataType(s) oocyte shape dynamics
# of image datasets 119
# of quantitative datasets 119
Paper information Takayama J and Onami S (2016), Cell Rep 15(3), 625-637
doi: 10.1016/j.celrep.2016.03.040
pmid: 27068469
Project 14-Ochiai-MolDynMS2
Release, Updated 2016-10-03,
2018-11-15
Organism(s) M. musculus
DataType(s) gene expression dynamics
# of image datasets 1
# of quantitative datasets 0
Paper information Ochiai H et. al. (2015), Nucleic Acids Res 43(19), e127
doi: 10.1093/nar/gkv624
pmid: 26092696
Project 16-Tanaka-FluidDyn
Release, Updated 2016-10-03,
2018-11-15
Organism(s) M. musculus
DataType(s) fluid dynamics, cell dynamics
# of image datasets 4
# of quantitative datasets 2
Paper information Tanaka, Yo and Fujita, Hideaki (2015), Sensors and Actuators B: Chemical 210, 267-272
doi: 10.1016/j.snb.2014.12.069
Project 17-Aoki-MolDyn
Release, Updated 2016-10-03,
2018-11-15
Organism(s) R. norvegicus
DataType(s) cell dynamics
# of image datasets 2
# of quantitative datasets 0
Paper information Aoki K et. al. (2013), Mol Cell 52(4), 529-40
doi: 10.1016/j.molcel.2013.09.015
pmid: 24140422
Project 18-Kunida-MolDynRho
Release, Updated 2016-10-03,
2018-11-15
Organism(s) H. sapiens
DataType(s) cell dynamics
# of image datasets 2
# of quantitative datasets 0
Paper information Kunida K et. al. (2012), J Cell Sci 125(Pt 10), 2381-92
doi: 10.1242/jcs.096859
pmid: 22344265
Project 19-Tanaka-FluidDyn
Release, Updated 2016-10-03,
2018-11-15
Organism(s) -
DataType(s) fluid dynamics
# of image datasets 1
# of quantitative datasets 0
Paper information Tanaka, Yo (2014), Micromachines 5(2), 289-299
doi: 10.3390/mi5020289
Project 11-Toyoshima-NeuAct SSBD:repository:
Ce_NEU_TY
Release, Updated 2016-05-20,
2018-11-15
Organism(s) C. elegans
DataType(s) neuronal nuclear dynamics
# of image datasets 14
# of quantitative datasets 14
Paper information Toyoshima Y et. al. (2016), PLoS Comput Biol 12(6), e1004970
doi: 10.1371/journal.pcbi.1004970
pmid: 27271939
Project 13-Watabe-MolDyn
Release, Updated 2016-01-18,
2018-11-15
Organism(s) R. norvegicus, D. discoideum
DataType(s) single molecule dynamics
# of image datasets 2
# of quantitative datasets 4
Paper information Watabe M et. al. (2015), PLoS One 10(7), e0130089
doi: 10.1371/journal.pone.0130089
pmid: 26147508
Project 15-Harima-GeneExp
Release, Updated 2016-01-18,
2018-11-15
Organism(s) M. musculus
DataType(s) gene expression data
# of image datasets 2
# of quantitative datasets 2
Paper information Harima Y et. al. (2013), Cell Rep 3(1), 1-7
doi: 10.1016/j.celrep.2012.11.012
pmid: 23219549
Project 10-Komatsuzaki-MolDyn
Release, Updated 2015-10-03,
2018-11-15
Organism(s) D. discoideum
DataType(s) single molecule dynamics
# of image datasets 1
# of quantitative datasets 1
Paper information Komatsuzaki A et. al. (2015), Small 11(12), 1396-401
doi: 10.1002/smll.201402508
pmid: 25504902
Project 7-Cronin-WormLocomotion
Release, Updated 2014-10-03,
2018-11-15
Organism(s) C. elegans
DataType(s) behavior
# of image datasets 0
# of quantitative datasets 11
Paper information Cronin CJ et. al. (2005), BMC Genet 6, 5
doi: 10.1186/1471-2156-6-5
pmid: 15698479
Project 8-Bashar-MouseEmbryo
Release, Updated 2014-10-03,
2018-11-15
Organism(s) M. musculus
DataType(s) nuclear positions
# of image datasets 1
# of quantitative datasets 1
Paper information Bashar MK et. al. (2012), PLoS One 7(5), e35550
doi: 10.1371/journal.pone.0035550
pmid: 22590505
Project 9-Masumoto-Transcriptome
Release, Updated 2014-10-03,
2017-10-03
Organism(s) M. musculus
DataType(s) gene expression data
# of image datasets 0
# of quantitative datasets 8
Paper information Masumoto KH et. al. (2010), Curr Biol 20(24), 2199-206
doi: 10.1016/j.cub.2010.11.038
pmid: 21129973
Project 1-Bao-WormEmbryo
Release, Updated 2013-10-03,
2018-11-15
Organism(s) C. elegans
DataType(s) nuclear division dynamics
# of image datasets 0
# of quantitative datasets 1
Paper information Bao Z et. al. (2006), Proc Natl Acad Sci U S A 103(8), 2707-12
doi: 10.1073/pnas.0511111103
pmid: 16477039
Project 4-Keller-FlyEmbryo
Release, Updated 2013-10-03,
2019-04-24
Organism(s) D. melanogaster
DataType(s) nuclear positions
# of image datasets 0
# of quantitative datasets 2
Paper information Keller PJ et. al. (2010), Nat Methods 7(8), 637-42
doi: 10.1038/nmeth.1476
pmid: 20601950
Project 5-Keller-FishEmbryo
Release, Updated 2013-10-03,
2018-11-15
Organism(s) D. rerio
DataType(s) nuclear positions
# of image datasets 0
# of quantitative datasets 7
Paper information Keller PJ et. al. (2008), Science 322(5904), 1065-9
doi: 10.1126/science.1162493
pmid: 18845710
Project 2-Kyoda-WormEmbryoRNAi
Release, Updated 2013-09-02,
2020-02-03
Organism(s) C. elegans
DataType(s) nuclear division dynamics
# of image datasets 187
# of quantitative datasets 186
Paper information Kyoda K et. al. (2013), Nucleic Acids Res 41(Database issue), D732-7
doi: 10.1093/nar/gks1107
pmid: 23172286
Project 6-Arjunan-MolDyn
Release, Updated 2013-09-02,
2018-11-15
Organism(s) E. coli
DataType(s) single molecule dynamics
# of image datasets 0
# of quantitative datasets 1
Paper information Arjunan SN and Tomita M (2010), Syst Synth Biol 4(1), 35-53
doi: 10.1007/s11693-009-9047-2
pmid: 20012222