Summary of ssbd-repos-000165

SSBD:database
URL

Name
ssbd-repos-000165 (165-Kinjo-ERKactivity)
URL
DOI
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Title
Live imaging data of ERK activity in the MDCK cyte or mouse ear epidermis before or after 2p excitation.
Description
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Submited Date
-
Release Date
2021-09-30
Updated Date
-
License
Funding information
-
File formats
Data size
1.1 GB

Organism
Mus musculus, Canis lupus familiaris
Strain
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Cell Line
MDCK cell
Genes
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Proteins
2paRAF, ERK

GO Molecular Function (MF)
extracellular signal-regulated kinase activity
GO Biological Process (BP)
NA
GO Cellular Component (CC)
NA
Study Type
Enzyme Activation, Mice, Fluorescence Resonance Energy Transfer/methods, Photons, Fluorescence Resonance Energy Transfer, Animals, Extracellular Signal-Regulated MAP Kinases/metabolism, Flavoproteins, Optogenetics, Extracellular Signal-Regulated MAP Kinases, Flavoproteins/metabolism
Imaging Methods
time lapse microscopy, FRET

Method Summary
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Related paper(s)

Tomoaki Kinjo, Kenta Terai, Shoichiro Horita, Norimichi Nomura, Kenta Sumiyama, Kaori Togashi, So Iwata, Michiyuki Matsuda (2019) FRET-assisted photoactivation of flavoproteins for in vivo two-photon optogenetics., Nature methods, Volume 16, Number 10, pp. 1029-1036

Published in 2019 Oct (Electronic publication in Sept. 9, 2019, midnight )

(Abstract) Optical dimerizers have been developed to untangle signaling pathways, but they are of limited use in vivo, partly due to their inefficient activation under two-photon (2P) excitation. To overcome this problem, we developed Forster resonance energy transfer (FRET)-assisted photoactivation, or FRAPA. On 2P excitation, mTagBFP2 efficiently absorbs and transfers the energy to the chromophore of CRY2. Based on structure-guided engineering, a chimeric protein with 40% FRET efficiency was developed and named 2P-activatable CRY2, or 2paCRY2. 2paCRY2 was employed to develop a RAF1 activation system named 2paRAF. In three-dimensionally cultured cells expressing 2paRAF, extracellular signal-regulated kinase (ERK) was efficiently activated by 2P excitation at single-cell resolution. Photoactivation of ERK was also accomplished in the epidermal cells of 2paRAF-expressing mice. We further developed an mTFP1-fused LOV domain that exhibits efficient response to 2P excitation. Collectively, FRAPA will pave the way to single-cell optical control of signaling pathways in vivo.
(MeSH Terms)

Contact(s)
Michiyuki Matsuda, Kenta Terai
Organization(s)
Graduate School of Biostudies, Kyoto University, Graduate School of Biostudies, Kyoto University , Research Center for Dynamic Living Systems, Research Center for Dynamic Living Systems , Laboratory of Bioimaging and Cell Signaling, Laboratory of Bioimaging and Cell Signaling
Image Data Contributors
Quantitative Data Contributors

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