Latest release of BDML and PDPML schemas can be found here.
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Please see BDML manual,
and PDPML manual for more details.
- bdml.xsd - Version
3.0, updated on October 03, 2017.
The main schema used to describe quantitative biological and dynamical data
- omicsbdml.xsd - Version 1.0,
updated on October 03, 2017.
The sub schema used to describe quantitative biological and dynamical data
- pdpml.xsd - Version
1.0, update on October 03, 2017.
The PDPML schema used to describe data processing of the quantitative biological data
- phenochar - a software package for extracting phenotypic characters from
BDML files. Please see phenochar manual
- BDML2BD5 - a software package for converting numerical data in the BDML
format (ver. 0.18) into BD5 format. Please see sample codes on Github for details.
- bdml2bd5v018.zip - It
supports for BDML version 0.18, and released April 18, 2018.
- SSBD-OMERO.insight - a plugin of ImageJ for reading to the images stored in
SSBD. Please see SSBD-OMERO.insight
manual for details.
- SSBD-OMERO.insight-ij-5.0.4-ice34.zip: It supports for OMERO.web
version 5.0.4, and released October 3, 2014.
- SSBD-OMERO.insight-ij-5.4.4-ice36.zip: It supports for OMERO.web
version 5.4.4, and released March 20, 2018.
It supports for OMERO.web version 5.4.10, and released April 22, 2019.
- Example codes using SSBD-OMERO API
- OpenSSBD - the open-source version of SSBD for managing quantitative
biological dynamics data. Please see Github README page for more details.