Summary of ssbd-repos-000140

Database

SSBD:database
URL

Name
URL
DOI

Title
Imaging and other-related data of neurogenic tagging mouse lines.
Description

Raw brain-section images (.scn) used to extract images (.png) in the NeuroGT database. Correspondence table (.csv) of the SCN images and the extracted PNG images. Raw whole-mount brain images of X-gal staining used for Fig. 2 in the paper. Raw immunostained images of mGFP and nls-βGAL used for Figs. 4-7, S1, and S2 in the paper. Count data (.xlsx) of EdU-positive and negative-neurons used for Figs. 5 and 7 in the paper.

Submited Date
2021-02-28
Release Date
2021-03-29
Updated Date
-
License
Funding information
-
File formats
SCN (Leica SCN400), tif, jpg, png
Data size
1.6 TB

Organism
Mus musculus (NCBI:txid10090)
Strain
C57BL/6 Neurod1<sup>CreER</sup>(D1B); Tau<sup>mGFP-nLacZ</sup>, C57/BL6 Neurod4<sup>CreER</sup>(D4A); Tau<sup>mGFP-nLacZ</sup>, C57/BL6 Neurog1<sup>CreER</sup>(G1C); Tau<sup>mGFP-nLacZ</sup>, C57/BL6 Neurog2<sup>CreER</sup>(G2A); Tau<sup>mGFP-nLacZ</sup>
Cell Line
-
Genes
-
Proteins
-

GO Molecular Function (MF)
-
GO Biological Process (BP)
nervous system development (GO:0007399)
GO Cellular Component (CC)
nucleus (GO:0005634), cell body (GO:0044297)
Study Type
neurons (MeSH Unique ID: D009474), brain (MeSH Unique ID: D001921), mice transgenic (MeSH Unique ID: D008822)
Imaging Methods
bright-field microscopy (FBbi:00000243), chemically fixed tissue (FBbi:00000002), whole mounted tissue (FBbi:00000024), beta-galactosidase (FBbi: 00000077)

Method Summary

See details in Hirata et al., NeuroGT: A brain atlas of neurogenic tagging CreER drivers for birthdate-based classification and manipulation of mouse neurons, Cell Reports Methods 100012, 2021

Related paper(s)

Contact(s)
Tatsumi Hirata
Organization(s)
National Institute of Genetics , Brain Function Laboratory
Image Data Contributors
Toshihiko Fujimori
Quantitative Data Contributors

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