Summary of 379-Okubo-bilaminoid


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Title
3D images of bilaminar organoid generated from co-culture of human pluripotent stem cells (hPSC) and hPSC-derived hypoblast-like cells
Description
Recently, several studies using cultures of human embryos together with single-cell RNA-seq analyses have revealed differences between humans and mice, necessitating the study of human embryos. Despite the importance of human embryology, ethical and legal restrictions have limited post-implantation-stage studies. Thus, recent efforts have focused on developing in vitro self-organizing models using human stem cells. In this paper, the authors report genetic and non-genetic approaches to generate authentic hypoblast cells (naive hPSC-derived hypoblast-like cells (nHyCs))-known to give rise to one of the two extraembryonic tissues essential for embryonic development-from naive human pluripotent stem cells (hPSCs). Their nHyCs spontaneously assemble with naive hPSCs to form a three-dimensional bilaminar structure (bilaminoids) with a pro-amniotic-like cavity. In the presence of additional naive hPSC-derived analogues of the second extraembryonic tissue, the trophectoderm, the efficiency of bilaminoid formation increases from 20% to 40%, and the epiblast within the bilaminoids continues to develop in response to trophectoderm-secreted IL-6. Furthermore, they show that bilaminoids robustly recapitulate the patterning of the anterior-posterior axis and the formation of cells reflecting the pregastrula stage, the emergence of which can be shaped by genetically manipulating the DKK1/OTX2 hypoblast-like domain.
Release date
2025-04-21
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
8 ( Image datasets: 8, Quantitative data datasets: 0 )
Size of Datasets
1.9 GB ( Image datasets: 1.9 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Homo sapiens

Datatype
-
Molecular Function (MF)
Biological Process (BP)
embryo development
Cellular Component (CC)
Biological Imaging Method
confocal microscopy
X scale
0.24 micrometer, NA, 0.104 micrometer, 0.194 micrometer, 0.181 micrometer, 0.26 micrometer
Y scale
0.24 micrometer, NA, 0.104 micrometer, 0.194 micrometer, 0.181 micrometer, 0.26 micrometer
Z scale
NA, 3.00 micrometer, 5.00 micrometer
T scale
-

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Contact
Takuya Yamamoto, Yasuhiro Takashima , Kyoto University, Kyoto University , Center for iPS Cell Research and Application,, Center for iPS Cell Research and Application, , Center for iPS Cell Research and Application,, Center for iPS Cell Research and Application,
Contributors

Dataset List of 379-Okubo-bilaminoid

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig6c_bilaminoid
# 12693
Dataset Kind Image data
Dataset Size 209.4 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig4e_bilaminoid_without-nTB
# 12694
Dataset Kind Image data
Dataset Size 231.4 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig4e_bilaminoid_without-nTB_3D
# 12695
Dataset Kind Image data
Dataset Size 197.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4e_bilaminoid_with-nTB
# 12696
Dataset Kind Image data
Dataset Size 226.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4e_bilaminoid_with-nTB_3D
# 12697
Dataset Kind Image data
Dataset Size 228.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig8j_bilaminoid
# 12698
Dataset Kind Image data
Dataset Size 265.4 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset ExtFig10a_bilaminoid
# 12699
Dataset Kind Image data
Dataset Size 185.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig10b_bilaminoid
# 12700
Dataset Kind Image data
Dataset Size 377.5 MB
4D view
SSBD:OMERO
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