Unified Projects
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2024-12-14
4
raw_image 4 files / 15.7 GB
0
database_v2
Title
Mitochondrial dynamics and segregation during the asymmetric division of Arabidopsis zygotes
Paper info
Kimata Y, et. al. Quant Plant Biol. 2020 Nov 30;1:e3. / Kimata Y, Higaki T, Kurihara D, Ando N, Matsumoto H, Higashiyama T, Ueda M. Mitochondrial dynamics and segregation during the asymmetric division of Arabidopsis zygotes. Quant Plant Biol. 2020 Nov 30;1:e3.
2024-12-14
2
raw_image 20 files / 19.0 MB
0
database_v2
Title
In vivo optical imaging of tumor stromal cells with hypoxia-inducible factor activity
Paper info
Miyabara H, et. al. Cancer Sci. 2023 Oct;114(10):3935-3945. / Miyabara H, Hirano R, Watanabe S, Soriano JCC, Watanabe H, Kuchimaru T, Kitada N, Kadonosono T, Maki SA, Kondoh G, Kizaka-Kondoh S. In vivo optical imaging of tumor stromal cells with hypoxia-inducible factor activity. Cancer Sci. 2023 Oct;114(10):3935-3945.
2024-12-14
42
raw_image 57 files / 3.2 GB
0
database_v2
Title
Time lapse images of cytoskeleton and cordon bleu, a microtubule-associated protein
Paper info
Tsukita K, et. al. Sci Adv. 2023 Feb 15;9(7):eadf6358. / Tsukita K, Kitamata M, Kashihara H, Yano T, Fujiwara I, Day TF, Katsuno T, Kim J, Takenaga F, Tanaka H, Park S, Miyata M, Watanabe H, Kondoh G, Takahashi R, Tamura A, Tsukita S. Phase separation of an actin nucleator by junctional microtubules regulates epithelial function. Sci Adv. 2023 Feb 15;9(7):eadf6358.
2024-12-10
1
repos 239 files / 26.5 GB
0
repository_v2
Title
Visualization and functional characterization of basement membrane dynamics in developing mouse hair follicles
Paper info
Duligengaowa Wuergezhen, Eleonore Gindroz, Ritsuko Morita, Kei Hashimoto, Takaya Abe, Hiroshi Kiyonari, Hironobu Fujiwara (2025) An eGFP-Col4a2 mouse model reveals basement membrane dynamics underlying hair follicle morphogenesis., The Journal of cell biology, Volume 224, Number 2
2024-11-28
1
repos 12 files / 114.6 MB
0
repository_v2
Title
Lung inflammation and fibrosis images of CD45-deficient mice
Paper info
Guangwei Cui, Akihiro Shimba, Jianshi Jin, Nozomi Hojo, Takuma Asahi, Shinya Abe, Aki Ejima, Shinri Okada, Keizo Ohira, Ryoma Kato, Shizue Tani-Ichi, Ryo Yamada, Takashi Ebihara, Katsuyuki Shiroguchi, Koichi Ikuta (2023) CD45 alleviates airway inflammation and lung fibrosis by limiting expansion and activation of ILC2s., Proceedings of the National Academy of Sciences of the United States of America, Volume 120, Number 36, pp. e2215941120
2024-11-25
85
raw_image 2500 files / 5.3 GB
0
database_v2
Title
Image data of trachea and esophagus formation in the mouse embryo
Paper info
Kishimoto et al. (2018) Nat. Commun., 9(1): 2816. / Keishi Kishimoto, Masaru Tamura, Michiru Nishita, Yasuhiro Minami, Akira Yamaoka, Takaya Abe, Mayo Shigeta, Mitsuru Morimoto. Synchronized mesenchymal cell polarization and differentiation shape the formation of the murine trachea and esophagus. Nat Commun. 2018 Jul 19;9(1):2816.
2024-11-25
2
raw_image 2 files / 242.0 MB
0
database_v2
Title
Bioluminescent time-lapse imaging of Ascl1-Luciferse reporter mice's brain slices after iPaD virus injection
Paper info
Kaise T, et. al. Genes Dev. 2022 Jan 1;36(1-2):23-37 / Kaise T, Fukui M, Sueda R, Piao W, Yamada M, Kobayashi T, Imayoshi I, Kageyama R. Functional rejuvenation of aged neural stem cells by Plagl2 and anti-Dyrk1a activity. Genes Dev. 2022 Jan 1;36(1-2):23-37
2024-11-25
23
raw_image 46 files / 276.1 MB
0
database_v2
Title
Time-course images of cellular dynamics of SMART mice stimulated responds to necroptosis.
Paper info
Murai S, et. al. Commun Biol. 2022 Dec 5;5(1):1331. / Murai S, Takakura K, Sumiyama K, Moriwaki K, Terai K, Komazawa-Sakon S, Seki T, Yamaguchi Y, Mikami T, Araki K, Ohmuraya M, Matsuda M, Nakano H. Generation of transgenic mice expressing a FRET biosensor, SMART, that responds to necroptosis. Commun Biol. 2022 Dec 5;5(1):1331.
2024-11-25
4
raw_image 9 files / 2.5 GB
0
database_v2
Title
Embryonic stem cell differentiation
Paper info
Ohgushi M, et. al. Cell Rep. 2022 Jun 21;39(12):110973 / Delamination of trophoblast-like syncytia from the amniotic ectodermal analogue in human primed embryonic stem cell-based differentiation model. Ohgushi M, Taniyama N, Vandenbon A, Eiraku M. Cell Rep. 2022 Jun 21;39(12):110973
2024-11-25
1
raw_image 12 files / 635.4 MB
0
database_v2
Title
MCF-7 cells stained by 12 different colors of Rdots
Paper info
Nishiyama R et. al., PNAS Nexus. 2023 Jan 14;2(2):pgad001. / Nishiyama R, Hiramatsu K, Kawamura S, Dodo K, Furuya K, de Pablo JG, Takizawa S, Min W, Sodeoka M, Goda K. Color-scalable flow cytometry with Raman tags. PNAS Nexus. 2023 Jan 14;2(2):pgad001.
2024-11-25
8
raw_image 16 files / 1.5 GB
0
database_v2
Title
Raman spectral data of mouse fixed tissues and live HeLa cells using multiline illumination.
Paper info
Mochizuki K, et. al. Biomed Opt Express. 2023 Feb 7;14(3):1015-1026. / Mochizuki K, Kumamoto Y, Maeda S, Tanuma M, Kasai A, Takemura M, Harada Y, Hashimoto H, Tanaka H, Smith NI, Fujita K. High-throughput line-illumination Raman microscopy with multislit detection. Biomed Opt Express. 2023 Feb 7;14(3):1015-1026.
2024-11-25
16
raw_image 40 files / 84.9 MB
0
database_v2
Title
Detection of multiple enzyme activities simultaneously in live cells by using activatable Raman probes
Paper info
Fujioka H, et. al. J Am Chem Soc. 2023 Apr 26;145(16):8871-8881. / Activatable Raman Probes Utilizing Enzyme-Induced Aggregate Formation for Selective Ex Vivo Imaging.
Fujioka H, Kawatani M, Spratt SJ, Komazawa A, Misawa Y, Shou J, Mizuguchi T, Kosakamoto H, Kojima R, Urano Y, Obata F, Ozeki Y, Kamiya M. J Am Chem Soc. 2023 Apr 26;145(16):8871-8881.
2024-11-25
1
raw_image 25000 files / 3.6 GB
0
database_v2
Title
Time-lapse images of C. elegans lethargus dynamics by rapid C. elegans motion imaging (Remi) system
Paper info
Kawano T, et. al. Cell Rep. 2023 Mar 28;42(3):112267 / Kawano T, Kashiwagi M, Kanuka M, Chen CK, Yasugaki S, Hatori S, Miyazaki S, Tanaka K, Fujita H, Nakajima T, Yanagisawa M, Nakagawa Y, Hayashi Y. ER proteostasis regulators cell-non-autonomously control sleep. Cell Rep. 2023 Mar 28;42(3):112267
2024-11-25
2
raw_image 6 files / 505.9 MB
0
database_v2
Title
Sharp visualization of cell-cycle progression using Fucci(SA)5 and Fucci(CA)5 fluorescent proteins
Paper info
Ando R, et. al. Cell Struct Funct. 2023 Jul 29;48(2):135-144 / Ando R, Sakaue-Sawano A, Shoda K, and Miyawaki A. Two coral fluorescent proteins of distinct colors for sharp visualization of cell-cycle progression. Cell Struct Funct. 2023 Jul 29;48(2):135-144.
2024-11-25
11
raw_image 27 files / 11.5 MB
0
database_v2
Title
Super-resolution vibrational imaging based on photoswitchable Raman probe
Paper info
Shou J, et. al. Sci Adv. 2023 Jun 16;9(24):eade9118. / Shou J, Komazawa A, Wachi Y, Kawatani M, Fujioka H, Spratt SJ, Mizuguchi T, Oguchi K, Akaboshi H, Obata F, Tachibana R, Yasunaga S, Mita Y, Misawa Y, Kojima R, Urano Y, Kamiya M, Ozeki Y. Sci Adv. 2023 Jun 16;9(24):eade9118.
2024-11-25
8
raw_image 112 files / 27.6 MB
0
database_v2
Title
Intracellular distribution of exogenous H-Ras in HeLa cells.
Paper info
Ikari M, et. al. JACS Au. 2023 Jun 1;3(6):1658-1669. / Ikari M, Yagi H, Kasai T, Inomata K, Ito M, Higuchi K, Matsuda N, Ito Y, Kigawa T. Direct Observation of Membrane-Associated H-Ras in the Native Cellular Environment by In-Cell 19F-NMR Spectroscopy. JACS Au. 2023 Jun 1;3(6):1658-1669.
2024-11-25
2
raw_image 2 files / 2.9 GB
0
database_v2
Title
Coordinate normalization of Arabidopsis zygote growth.
Paper info
Kang Z, et. al. Plant Cell Physiol. 2023 Dec 6;64(11):1279-1288. / Kang Z, Matsumoto H, Nonoyama T, Nakagawa S, Ishimoto Y, Tsugawa S, Ueda M. Coordinate Normalization of Live-Cell Imaging Data Reveals Growth Dynamics of the Arabidopsis Zygote. Plant Cell Physiol. 2023 Dec 6;64(11):1279-1288.
2024-11-25
8
raw_image 24 files / 37.0 MB
0
database_v2
Title
Inhibition of SARS-CoV-2 virus infection to human airway organoids by autophagy-related compounds.
Paper info
Hashimoto R, et. al. Mol Pharm. 2023 Apr 3;20(4):2276-2287. / Hashimoto R, Tamura T, Watanabe Y, Sakamoto A, Yasuhara N, Ito H, Nakano M, Fuse H, Ohta A, Noda T, Matsumura Y, Nagao M, Yamamoto T, Fukuhara T, Takayama K. Evaluation of Broad Anti-Coronavirus Activity of Autophagy-Related Compounds Using Human Airway Organoids. Mol Pharm. 2023 Apr 3;20(4):2276-2287.
2024-11-25
1
repos 16 files / 8.7 MB
0
repository_v2
Title
Autonomous multicolor bioluminescence imaging
Paper info
Subhan Hadi Kusuma, Taishi Kakizuka, Mitsuru Hattori, Takeharu Nagai (2024) Autonomous multicolor bioluminescence imaging in bacteria, mammalian, and plant hosts., Proceedings of the National Academy of Sciences of the United States of America, Volume 121, Number 41, pp. e2406358121
2024-11-21
1
repos 14 files / 47.3 MB
0
repository_v2
Title
Integrative analysis reveals early epigenetic alterations in high-
grade serous ovarian carcinomas
Paper info
Hidenori Machino, Ai Dozen, Mariko Konaka, Masaaki Komatsu, Kohei Nakamura, Noriko Ikawa, Kanto Shozu, Ken Asada, Syuzo Kaneko, Hiroshi Yoshida, Tomoyasu Kato, Kentaro Nakayama, Vassiliki Saloura, Satoru Kyo, Ryuji Hamamoto (2023) Integrative analysis reveals early epigenetic alterations in high-grade serous ovarian carcinomas., Experimental & molecular medicine
2024-11-21
1
repos 103 files / 214.4 MB
0
repository_v2
Title
PROX1+ and CDX2+ cells form distinct cell populations in colorectal cancer.
Paper info
Hirokazu Ohata, Daisuke Shiokawa, Hiroaki Sakai, Yusuke Kanda, Yoshie Okimoto, Syuzo Kaneko, Ryuji Hamamoto, Hitoshi Nakagama, Koji Okamoto (2023) PROX1 induction by autolysosomal activity stabilizes persister-like state of colon cancer via feedback repression of the NOX1-mTORC1 pathway., Cell reports, pp. 112519
2024-11-21
1
repos 6 files / 31.1 GB
0
repository_v2
Title
Digital staining of the cell nucleus
Paper info
Kono, N. (Ed.) (2025) Life Science Data Analysis: Start by Drawing Figures When Stuck with Big Data — Learn the Gold Standards of Analysis and Master Python and R through Interaction with Generative AI, Experimental Medicine Extra Series, 349
2024-11-16
1
repos 4593 files / 137.0 GB
0
repository_v2
Title
Diversity in the epidermal growth factor receptor ligands
Paper info
Eriko Deguchi, Shuhao Lin, Daiki Hirayama, Kimiya Matsuda, Akira Tanave, Kenta Sumiyama, Shinya Tsukiji, Tetsuhisa Otani, Mikio Furuse, Alexander Sorkin, Michiyuki Matsuda, Kenta Terai (2024) Low-affinity ligands of the epidermal growth factor receptor are long-range signal transmitters in collective cell migration of epithelial cells., Cell reports, Volume 43, Number 11, pp. 114986
2024-10-14
1
repos 1040544 files / 995.1 MB
0
repository_v2
Title
A set of imaging data obtained by INSPCTOR
Paper info
Taishi Kakizuka, Tohru Natsume, Takeharu Nagai (2024) Compact lens-free imager using a thin-film transistor for long-term quantitative monitoring of stem cell culture and cardiomyocyte production., Lab on a chip, Volume 24, Number 24, pp. 5290-5303
2024-10-01
1
repos 167 files / 5.7 MB
0
repository_v2
Title
Image-based parameter inference for epithelial mechanics
Paper info
Goshi Ogita, Takefumi Kondo, Keisuke Ikawa, Tadashi Uemura, Shuji Ishihara, Kaoru Sugimura (2022) Image-based parameter inference for epithelial mechanics., PLoS computational biology, Volume 18, Number 6, pp. e1010209
2024-09-26
1
repos 80 files / 6.7 GB
0
repository_v2
Title
Confocal images of the immunostained cerebellum in PTPdelta/Ptprd KO mice
Paper info
Yuto Okuno, Kazuto Sakoori, Kyoko Matsuyama, Miwako Yamasaki, Masahiko Watanabe, Kouichi Hashimoto, Takaki Watanabe, Masanobu Kano (2023) PTPdelta is a presynaptic organizer for the formation and maintenance of climbing fiber to Purkinje cell synapses in the developing cerebellum., Frontiers in molecular neuroscience, Volume 16, pp. 1206245
2024-09-25
1
repos 3 files / 3.8 MB
0
repository_v2
Title
Visualization of actin-rich cellular protrusions in medaka embryos
Paper info
Toru Kawanishi, Ann Kathrin Heilig, Atsuko Shimada, Hiroyuki Takeda (2023) Visualization of Actin Cytoskeleton in Cellular Protrusions in Medaka Embryos., Bio-protocol, Volume 13, Number 13, pp. e4710
2024-09-25
1
repos 353 files / 1.4 GB
0
repository_v2
Title
The transcription factor NRF1 (NFE2L1) activates aggrephagy by inducing p62 and GABARAPL1 after proteasome inhibition to maintain proteostasis
Paper info
Atsushi Hatanaka, Sota Nakada, Gen Matsumoto, Katsuya Satoh, Iori Aketa, Akira Watanabe, Tomoaki Hirakawa, Tadayuki Tsujita, Tsuyoshi Waku, Akira Kobayashi (2023) The transcription factor NRF1 (NFE2L1) activates aggrephagy by inducing p62 and GABARAPL1 after proteasome inhibition to maintain proteostasis., Scientific reports, Volume 13, Number 1, pp. 14405
2024-09-25
1
repos 86 files / 1.0 GB
0
repository_v2
Title
Cells sorted off hiPSC-derived kidney organoids coupled with immortalized cells reliably model the proximal tubule
Paper info
Ramin Banan Sadeghian, Ryohei Ueno, Yuji Takata, Akihiko Kawakami, Cheng Ma, Toshikazu Araoka, Minoru Takasato, Ryuji Yokokawa (2023) Cells sorted off hiPSC-derived kidney organoids coupled with immortalized cells reliably model the proximal tubule., Communications biology, Volume 6, Number 1, pp. 483
2024-09-09
https://arxiv.org/abs/2401.15909 / doi: 10.48550/arxiv.2401.15909 / doi: 10.1103/physrevresearch.6.033272
1
repos 59 files / 14.9 GB
0
repository_v2
Title
Images and trajectories of diffusing objects
Paper info
Takanami, Kaito, Taniguchi, Daisuke, Enoki, Sawako, Kuroda, Masafumi, Okada, Yasushi, Kabashima, Yoshiyuki Detection of diffusion anisotropy from an individual short particle tr ajectory / Taniguchi, Daisuke, Kuroda, Masafumi, Enoki, Sawako, Okada, Yasushi, Kabashima, Yoshiyuki (2024/09/09/) Detection of diffusion anisotropy from an individual short particle trajectory, Physical Review Research, Volume 6, Number 3, 033272-
2024-07-12
1
repos 614274 files / 44.0 GB
0
repository_v2
Title
High-dimensional and large-scale phenotyping of yeast mutants
Paper info
Yoshikazu Ohya, Jun Sese, Masashi Yukawa, Fumi Sano, Yoichiro Nakatani, Taro L Saito, Ayaka Saka, Tomoyuki Fukuda, Satoru Ishihara, Satomi Oka, Genjiro Suzuki, Machika Watanabe, Aiko Hirata, Miwaka Ohtani, Hiroshi Sawai, Nicolas Fraysse, Jean-Paul Latge, Jean M Francois, Markus Aebi, Seiji Tanaka, Sachiko Muramatsu, Hiroyuki Araki, Kintake Sonoike, Satoru Nogami, Shinichi Morishita (2005) High-dimensional and large-scale phenotyping of yeast mutants., Proceedings of the National Academy of Sciences of the United States of America, Volume 102, Number 52, pp. 19015-20
2024-07-12
1
repos 160121 files / 9.7 GB
0
repository_v2
Title
High-dimensional single-cell phenotyping of yeast heterozygous diploid strains
Paper info
Shinsuke Ohnuki, Yoshikazu Ohya (2018) High-dimensional single-cell phenotyping reveals extensive haploinsufficiency., PLoS biology, Volume 16, Number 5, pp. e2005130
2024-07-01
1
repos 2 files / 51.4 MB
0
repository_v2
Title
Rac1/Rac3-double knockout cochlear hair cells
Paper info
Takashi Nakamura, Hirofumi Sakaguchi, Hiroaki Mohri, Yuzuru Ninoyu, Akihiro Goto, Taro Yamaguchi, Yoshitaka Hishikawa, Michiyuki Matsuda, Naoaki Saito, Takehiko Ueyama (2023) Dispensable role of Rac1 and Rac3 after cochlear hair cell specification., Journal of molecular medicine (Berlin, Germany)
2024-06-25
doi: 10.1101/2023.09.27.559686 / https://www.biorxiv.org/content/10.1101/2023.09.27.559686v1 / PMID: 38889144 / doi: 10.1073/pnas.2405553121
1
repos 102039 files / 294.0 GB
0
repository_v2
Title
Dataset for "Cytoplasmic fluidization contributes to breaking spore dormancy in fission yeast."
Paper info
Sakai, Keiichiro, Kondo, Yohei, Goto, Yuhei, Aoki, Kazuhiro (2023/01/01), Cytoplasmic fluidization triggers breaking spore dormancy in fission yeast, bioRxiv, 2023.09.27.559686 / Keiichiro Sakai, Yohei Kondo, Yuhei Goto, Kazuhiro Aoki (2024) Cytoplasmic fluidization contributes to breaking spore dormancy in fission yeast., Proceedings of the National Academy of Sciences of the United States of America, Volume 121, Number 26, pp. e2405553121
2024-06-10
1
repos 970 files / 10.1 GB
0
repository_v2
Title
Dataset of actin nanocluster dynamics during Drosophila tracheal tubulogenesis
Paper info
Sayaka Sekine, Mitsusuke Tarama, Housei Wada, Mustafa M Sami, Tatsuo Shibata, Shigeo Hayashi (2024) Emergence of periodic circumferential actin cables from the anisotropic fusion of actin nanoclusters during tubulogenesis., Nature communications, Volume 15, Number 1, pp. 464
2024-06-08
1
repos 34 files / 3.0 GB
0
repository_v2
Title
Expression patterns of Osiris family genes in the pupal head of Drosophila
Paper info
Zhengkuan Sun, Sachi Inagaki, Keita Miyoshi, Kuniaki Saito, Shigeo Hayashi (2024) Osiris gene family defines the cuticle nanopatterns of Drosophila., Genetics
2024-06-05
1
repos 100 files / 623.2 GB
0
repository_v2
Title
Imaging data in the paper, "Automated neuronal reconstruction with super-multicolour Tetbow labelling and threshold-based clustering of colour hues" (Leiwe et al., 2024).
Paper info
Marcus N Leiwe, Satoshi Fujimoto, Toshikazu Baba, Daichi Moriyasu, Biswanath Saha, Richi Sakaguchi, Shigenori Inagaki, Takeshi Imai (2024) Automated neuronal reconstruction with super-multicolour Tetbow labelling and threshold-based clustering of colour hues., Nature communications, Volume 15, Number 1, pp. 5279
2024-06-04
1
repos 267 files / 108.5 GB
0
repository_v2
Title
Neuropeptide gene expression atlas in the adult zebrafish brain
Paper info
Towako Hiraki-Kajiyama, Nobuhiko Miyasaka, Reiko Ando, Noriko Wakisaka, Hiroya Itoga, Shuichi Onami, Yoshihiro Yoshihara (2024) An atlas and database of neuropeptide gene expression in the adult zebrafish forebrain., The Journal of comparative neurology, Volume 532, Number 6, pp. e25619
2024-05-17
1
repos 10 files / 187.7 MB
0
repository_v2
Title
SEM imege of cancer cells adhered on the track etched membrane
Paper info
Akifumi Shiomi, Taikopaul Kaneko, Kaori Nishikawa, Arata Tsuchida, Takashi Isoshima, Mayuko Sato, Kiminori Toyooka, Kentaro Doi, Hidekazu Nishikii, Hirofumi Shintaku (2024) High-throughput mechanical phenotyping and transcriptomics of single cells., Nature communications, Volume 15, Number 1, pp. 3812
2024-04-08
doi: 10.1101/2024.01.14.575615 / https://www.biorxiv.org/content/10.1101/2024.01.14.575615v1 / PMID: 38583078 / doi: 10.1002/yea.3937
1
repos 31006 files / 84.3 GB
0
repository_v2
Title
Dataset for "Live-cell fluorescence imaging and optogenetic control of PKA kinase activity in fission yeast Schizosaccharomyces pombe."
Paper info
Keiichiro Sakai, Kazuhiro Aoki, Yuhei Goto (2024) Live-cell fluorescence imaging and optogenetic control of PKA kinase activity in fission yeast Schizosaccharomyces pombe., Yeast (Chichester, England)
2024-01-23
414
raw_image 1596212 files / 3.1 TB
0
database_v2
Title
Time-lapse images of cell dynamics in different E. coli strain cells after gene deletion by blue-light illumination.
Paper info
Koganezawa Y, et. al. (2022) Elife, May 10;11:e74486. / Koganezawa Y, Umetani M, Sato M, Wakamoto Y. History-dependent physiological adaptation to lethal genetic modification under antibiotic exposure. Elife. 2022 May 10;11:e74486.
2024-01-15
https://www.biorxiv.org/content/10.1101/2023.03.26.534249v1 / doi: 10.1101/2023.03.26.534249 / PMID: 38228139 / doi: 10.1016/j.devcel.2023.12.014
1
repos 29665 files / 76.1 GB
0
repository_v2
Title
Dataset for "Live-cell imaging provides direct evidence for a threshold in CDK activity at the G2/M transition."
Paper info
Hironori Sugiyama, Yuhei Goto, Yohei Kondo, Damien Coudreuse, Kazuhiro Aoki (2023/01/01), Live-cell imaging provides direct evidence for a threshold in CDK activity at the G2/M transition, bioRxiv, 2023.03.26.534249 / Hironori Sugiyama, Yuhei Goto, Yohei Kondo, Damien Coudreuse, Kazuhiro Aoki (2024) Live-cell imaging defines a threshold in CDK activity at the G2/M transition., Developmental cell
2023-12-24
84
raw_image 1245 files / 1.6 TB
84
raw_bdml 168 files / 52.4 GB
database_v2
Title
Semantic segmentation data of eight anatomical regions for mouse brain slices with neurogenic-tagged neurons from NeuroGT database
Paper info
Shimojo Y, et. al. (2023) IPSJ TBIO / Shimojo Y, Suehara K, Hirata T, Tohsato Y (2023) IPSJ Transactions on Bioinformatics (under review)
2023-10-27
1
repos 86 files / 511.0 GB
0
repository_v2
Title
Imaging data in the paper, "Microglia are dispensable for developmental dendrite pruning of mitral cells in mice" (Niiyama et al., 2023).
Paper info
Tetsushi Niiyama, Satoshi Fujimoto, Takeshi Imai (2023) Microglia are dispensable for developmental dendrite pruning of mitral cells in mice., eNeuro
2023-09-01
21
raw_image 63 files / 8.1 GB
0
database_v3
Title
Confocal immunohistochemistry images and BDML file for quantitative information of SMA/laminin α2 mouse vessel-type classification for machine learning.
Paper info
Oishi M, Passlick S, Yamazaki Y, Unekawa M, Adachi R, Yamada M, Imayoshi I, Abe Y, Steinhäuser C, Tanaka KF. Separate optogenetic manipulation of Nerve/glial antigen 2 (NG2) glia and mural cells using the NG2 promoter. Glia. 2023 Feb;71(2):317-333.
2023-09-01
21
raw_image 63 files / 8.1 GB
0
database_v2
Title
Confocal immunohistochemistry images and BDML file for quantitative information of SMA/laminin α2 mouse vessel-type classification for machine learning.
Paper info
Oishi M, et. al. (2023) Glia. Feb;71(2):317-333. / Oishi M, Passlick S, Yamazaki Y, Unekawa M, Adachi R, Yamada M, Imayoshi I, Abe Y, Steinhäuser C, Tanaka KF. Separate optogenetic manipulation of Nerve/glial antigen 2 (NG2) glia and mural cells using the NG2 promoter. Glia. 2023 Feb;71(2):317-333.
2023-08-30
2
raw_image 5517 files / 1.1 TB
0
database_v2
Title
Cryo-electron microscopy (cryo-EM) microscopy images of human ribosomes isolated from METTL18 KO cells.
Paper info
Matsuura-Suzuki E, et. al. Elife. 2022 Jun 8;11:e72780. / Matsuura-Suzuki E, Shimazu T, Takahashi M, Kotoshiba K, Suzuki T, Kashiwagi K, Sohtome Y, Akakabe M, Sodeoka M, Dohmae N, Ito T, Shinkai Y, Iwasaki S. METTL18-mediated histidine methylation of RPL3 modulates translation elongation for proteostasis maintenance. Elife. 2022 Jun 8;11:e72780.
2023-08-29
146
raw_image 375024 files / 248.4 GB
0
database_v2
Title
Time-lapse images of L1210 cells growth and division in the mammalian mother machine microfluidic device.
Paper info
Seita, A et. al. (2021) PLoS One 16, e0236534. / Seita, A., Nakaoka, H., Okura, R., and Wakamoto, Y. (2021). Intrinsic growth heterogeneity of mouse leukemia cells underlies differential susceptibility to a growth-inhibiting anticancer drug. PLoS One 16, e0236534. 10.1371/journal.pone.0236534.
2023-08-29
28
raw_image 1152 files / 73.6 GB
0
database_v2
Title
Time-lapse or z-stack images of EGFR signaling dynamics in epithelial homeostasis of Drosophila embyos.
Paper info
Yoshida K, et. al. Development. 2023 Mar 1;150(5):dev201231. / Yoshida K, Hayashi S. Epidermal growth factor receptor signaling protects epithelia from morphogenetic instability and tissue damage in Drosophila. Development. 2023 Mar 1;150(5):dev201231.
2023-08-15
1
repos 137 files / 37.8 MB
0
repository_v2
Title
x-y coordinates of Caenorhabditis elegans centroids stimulated with electric shock
Paper info
Ling Fei Tee, Jared J Young, Ryoga Suzuki, Keisuke Maruyama, Sota Kimura, Yuto Endo, Koutarou D Kimura (2023) Electric shock causes a fleeing-like persistent behavioral response in the nematode Caenorhabditis elegans., Genetics