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139-Kishimoto-TracheaDev
Author reviewed
Image data of trachea and esophagus formation in the mouse embryo
SSBD:OMERO.gallery
SSBD:OMERO
SSBD:downloads
Project ID
139-Kishimoto-TracheaDev
Title
Image data of trachea and esophagus formation in the mouse embryo
Description
-
Release Date
2024-11-25
Update Date
-
License
CC BY
Version
1.0.0
Method Summary
See details in Kishimoto et al. (2018) Nat. Commun., 9(1): 2816.
Paper DOI
https://doi.org/10.1038/s41467-018-05189-2
Paper URL
https://www.ncbi.nlm.nih.gov/pubmed/30026494
Kind
Image data
Organism
Mus musculus
(
NCBITaxon:10090
)
Strain
-
Cell line
-
Biological Process
branching morphogenesis of an epithelial tube (
GO:0048754
)
Cellular Component
nucleus (
GO:0005634
)
cytoskeleton (
GO:0005856
)
Medical Subject Headings
Animals (
MeSH:D000818
)
Mice (
MeSH:D051379
)
Morphogenesis (
MeSH:D009024
)
Cartilage (
MeSH:D002356
)
Cartilage/growth & development (Q000254)
Cell Differentiation (
MeSH:D002454
)
Cell Polarity (
MeSH:D016764
)
Embryo
Mammalian (
MeSH:D004622
)
Gene Expression Regulation
Developmental (
MeSH:D018507
)
Trachea (
MeSH:D014132
)
Trachea/cytology (
MeSH:Q000166
)
Trachea/growth & development (
MeSH:Q000254
)
Esophagus (
MeSH:D004947
)
Esophagus/cytology (
MeSH:Q000166
)
Esophagus/growth & development (
MeSH:Q000254
)
Wnt-5a Protein (
MeSH:D000071818
)
Wnt-5a Protein/genetics (
MeSH:Q000235
)
Wnt-5a Protein/metabolism (
MeSH:Q000378
)
SOX9 Transcription Factor (
MeSH:D055758
)
SOX9 Transcription Factor/genetics (
MeSH:Q000235
)
SOX9 Transcription Factor/metabolism (
MeSH:Q000378
)
Signal Transduction (
MeSH:D015398
)
Actin Cytoskeleton (
MeSH:D008841
)
Actin Cytoskeleton/metabolism (
MeSH:Q000378
)
Actin Cytoskeleton/ultrastructure (
MeSH:Q000648
)
Method involved in biological imaging
confocal microscopy (
FBbi:00000251
)
multi-photon microscopy (
FBbi:00000255
)
time lapse microscopy (
FBbi:00000249
)
Image datasets
85
Quantitative datasets
0
Paper DOI / Paper URL
PMID: 30026494
,
doi: 10.1038/s41467-018-05189-2
OMERO.gallery
https://ssbd.riken.jp/omero/gallery/show_project/1301/
OMERO
https://ssbd.riken.jp/omero/webclient/?show=project-1301
downloads
https://ssbd.riken.jp/data/139-Kishimoto-TracheaDev/
People
Contact
Mitsuru Morimoto
RIKEN
Center for Biosystems Dynamics Research
Laboratory for Lung Development
2-2-3, Minatojima-minamimachi, Chuo-ku, Kobe 650-0047 Japan
Imaging dataset contributor
-
Quantitative dataset contributor
-
Datasets
Previous
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Thumbnail
Dataset
Organism
Kind / Links
Figure3A_E10.5_KO
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Gross morphology of a developing Wnt5a−/− trachea of E10.5 mouse
Figure3A_E10.5_WT
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Gross morphology of a developing wild-type trachea of E10.5 mouse
Figure3A_E11.5_KO
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Gross morphology of a developing Wnt5a−/− trachea of E11.5 mouse
Figure3A_E11.5_WT
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Gross morphology of a developing wild-type trachea of E11.5 mouse
Figure3A_E12.5_KO
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Gross morphology of a developing Wnt5a−/− trachea of E12.5 mouse
Figure3A_E12.5_WT
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Gross morphology of a developing wild-type trachea of E12.5 mouse
Figure3A_E18.5_KO
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Gross morphology of a developing Wnt5a−/− trachea of E18.5 mouse
Figure3A_E18.5_WT
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Gross morphology of a developing wild-type trachea of E18.5 mouse
Figure4H_Wnt5a_KO
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse sequence image of Wnt5a−/− epithelial sphere and SM cells in Matrigel
Figure4H_Wnt5a_WT
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Time-lapse sequence image of wild type epithelial sphere and SM cells in Matrigel
Figure5I_wnt5a_WT_Gut1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
The polarity of subepithelial cells of Gut from wild-type mouse
Figure5I_wnt5a_WT_anterior
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
The polarity of subepithelial cells of Esophagus from wild-type mouse
Figure5I_wnt5a_WT_stomach
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
The polarity of subepithelial cells of Stomach from wild-type mouse
Figure5J_wnt5a_KO_Gut1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
The polarity of subepithelial cells of Gut from Wnt5a−/− mouse
Figure5J_wnt5a_KO_anterior
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
The polarity of subepithelial cells of Esophagus from Wnt5a−/− mouse
Figure5J_wnt5a_KO_stomach
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
The polarity of subepithelial cells of Stomach from Wnt5a−/− mouse
FigureS12A_Foxg1CreSox9FF_E12.5_Dorsal
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in Foxg1Cre; Sox9flox/flox mouse E12.5 tracheas from dorsal view
FigureS12A_Foxg1CreSox9FF_E12.5_Ventral
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in Foxg1Cre; Sox9flox/flox mouse E12.5 tracheas from ventral view
FigureS12A_Foxg1CreSox9FF_E14.5_Dorsal
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in Foxg1Cre; Sox9flox/flox mouse E14.5 tracheas from dorsal view
FigureS12A_Foxg1CreSox9FF_E14.5_Ventral
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in Foxg1Cre; Sox9flox/flox mouse E14.5 tracheas from ventral view
FigureS12A_Foxg1CreSox9FF_E16.5_Dorsal
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in Foxg1Cre; Sox9flox/flox mouse E16.5 tracheas from dorsal view
FigureS12A_Foxg1CreSox9FF_E16.5_Ventral
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in Foxg1Cre; Sox9flox/flox mouse E16.5 tracheas from ventral view
FigureS12A_Foxg1CreSox9FF_E18.5_Dorsal
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in Foxg1Cre; Sox9flox/flox mouse E18.5 tracheas from dorsal view
FigureS12A_Foxg1CreSox9FF_E18.5_Ventral
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in Foxg1Cre; Sox9flox/flox mouse E18.5 tracheas from ventral view
FigureS12A_control_E12.5_Dorsal
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in wild-type mouse E12.5 tracheas from dorsal view
FigureS12A_control_E12.5_Ventral
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in wild-type mouse E12.5 tracheas from ventral view
FigureS12A_control_E14.5_Dorsal
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in wild-type mouse E14.5 tracheas from dorsal view
FigureS12A_control_E14.5_Ventral
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in wild-type mouse E14.5 tracheas from ventral view
FigureS12A_control_E16.5_Dorsal
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in wild-type mouse E16.5 tracheas from dorsal view
FigureS12A_control_E16.5_Ventral
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in wild-type mouse E16.5 tracheas from ventral view
FigureS12A_control_E18.5_Dorsal
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in wild-type mouse E18.5 tracheas from dorsal view
FigureS12A_control_E18.5_Ventral
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Cell proliferation of epithelial cells and distribution of BrdU-incorporated cells in wild-type mouse E18.5 tracheas from ventral view
FigureS13B_SHHCreR26RRG_E14.5
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Optical image of the tracheal epithelium in E14.5 SHHCre; R26RRG/+ mouse
FigureS13B_SHHCreR26RRG_E16.5
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Optical image of the tracheal epithelium in E16.5 SHHCre; R26RRG/+ mouse
FigureS13B_SHHCreR26RRG_E18.5
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Optical image of the tracheal epithelium in E18.5 SHHCre; R26RRG/+ mouse
FigureS15A_E14.5_CDH1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of adhesion- and polarity-related protein CDH1 in mouse E14.5
FigureS15A_E14.5_CDH1_ZO1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of adhesion- and polarity-related protein CDH1 and ZO-1 in mouse E14.5
FigureS15A_E14.5_CTNNB1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of adhesion- and polarity-related protein CTNNB1 in mouse E14.5
FigureS15A_E14.5_SCRIB
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of adhesion- and polarity-related protein SCRIB in mouse E14.5
FigureS15A_E16.5_CDH1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of adhesion- and polarity-related protein CDH1 in mouse E16.5
FigureS15A_E16.5_CDH1_ZO1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of adhesion- and polarity-related protein CDH1 and ZO-1 in mouse E16.5
FigureS15A_E16.5_CTNNB1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of adhesion- and polarity-related protein CTNNB1 in mouse E16.5
FigureS15A_E16.5_SCRIB
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of adhesion- and polarity-related protein SCRIB in mouse E16.5
FigureS15A_E18.5_CDH1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of adhesion- and polarity-related protein CDH1 in mouse E18.5
FigureS15A_E18.5_CDH1_ZO1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of adhesion- and polarity-related protein CDH1 and ZO-1 in mouse E18.5
FigureS15A_E18.5_CTNNB1
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of adhesion- and polarity-related protein CTNNB1 in mouse E18.5
FigureS15A_E18.5_SCRIB
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of adhesion- and polarity-related protein SCRIB in mouse E18.5
FigureS15B_E14.5_Factin
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of cytoskeletal components F-actin in mouse E14.5
FigureS15B_E14.5_atubulin
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of cytoskeletal components a-tubulin in mouse E14.5
FigureS15B_E14.5_pMLC2
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Expression and distribution of cytoskeletal components pMLC2 in mouse E14.5