Summary of 387-Ando-StayGold


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Title
Super resolution cellular images using fluorescent-tags of StayGold variants
Description
-
Release date
2025-11-26
Updated date
-
License
CC BY 4.0
Kind
Image data based on Experiment
Number of Datasets
31 ( Image datasets: 31, Quantitative data datasets: 0 )
Size of Datasets
153.6 GB ( Image datasets: 153.6 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Chlorocebus pygerythrus, Homo sapiens
Cell lines(s)
HeLa cell, COS-7 cell, HCT 116 cell

Datatype
-
Molecular Function (MF)
regulate the chromosome assembly and segregation
Biological Process (BP)
cellular response to histamine, chromosome organization, Golgi organization, cellular response to ionomycin, negative regulation of actin filament polymerization
Cellular Component (CC)
nucleus, actin cytoskeleton, Golgi apparatus, chromosome, mitochondrion
Biological Imaging Method
lattice SIM, structured illumination microscopy (SIM) (Fbbi:, single-beam laser-scanning confocal microscopy (LSCM), spinning disk confocal microscopy, 00000332)
T scale
0.11 second, 8.70 frames/second, 1 second, 1 minute, 6.9 seconds, NA, 0.31 second, 3.18 frames/second, 0.41 second, 2.41 frames/second, 0.4 seconds

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Ryoko Ando, Satoshi Shimozono, Hideo Ago, Masatoshi Takagi, Mayu Sugiyama, Hiroshi Kurokawa, Masahiko Hirano, Yusuke Niino, Go Ueno, Fumiyoshi Ishidate, Takahiro Fujiwara, Yasushi Okada, Masaki Yamamoto, Atsushi Miyawaki (2023) StayGold variants for molecular fusion and membrane-targeting applications., Nature methods

Published in 2023 Nov 30 (Electronic publication in Nov. 30, 2023, midnight )

(Abstract) Although StayGold is a bright and highly photostable fluorescent protein, its propensity for obligate dimer formation may hinder applications in molecular fusion and membrane targeting. To attain monovalent as well as bright and photostable labeling, we engineered tandem dimers of StayGold to promote dispersibility. On the basis of the crystal structure of this fluorescent protein, we disrupted the dimerization to generate a monomeric variant that offers improved photostability and brightness compared to StayGold. We applied the new monovalent StayGold tools to live-cell imaging experiments using spinning-disk laser-scanning confocal microscopy or structured illumination microscopy. We achieved cell-wide, high-spatiotemporal resolution and sustained imaging of dynamic subcellular events, including the targeting of endogenous condensin I to mitotic chromosomes, the movement of the Golgi apparatus and its membranous derivatives along microtubule networks, the distribution of cortical filamentous actin and the remolding of cristae membranes within mobile mitochondria.

Contact
Atsushi Miyawaki , RIKEN , Laboratory for Cell Function Dynamics, RIKEN Center for Brain Science , Laboratory for Cell Function Dynamics, RIKEN Center for Brain Science
Contributors

Dataset List of 387-Ando-StayGold

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#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig4_chromosome
# 12725
Datast ID Fig4_chromosome
Dataset Kind Image data
Dataset Size 40.7 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Video2_chromosome
# 12726
Datast ID Video2_chromosome
Dataset Kind Image data
Dataset Size 1.5 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig6a_chromosome_fast
# 12727
Dataset Kind Image data
Dataset Size 46.0 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig6b_mClover3
# 12728
Datast ID ExtFig6b_mClover3
Dataset Kind Image data
Dataset Size 12.5 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig6b_td5oxSG
# 12729
Datast ID ExtFig6b_td5oxSG
Dataset Kind Image data
Dataset Size 12.5 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Video5_GianCreg_1
# 12730
Datast ID Video5_GianCreg_1
Dataset Kind Image data
Dataset Size 4.4 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Video5_GianCreg_2
# 12731
Datast ID Video5_GianCreg_2
Dataset Kind Image data
Dataset Size 4.5 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Video6_GianCreg_Tub
# 12732
Dataset Kind Image data
Dataset Size 1.6 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset SupplFig16_GianCreg_Tub
# 12733
Dataset Kind Image data
Dataset Size 88.1 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig7a_GM130_1
# 12734
Datast ID ExtFig7a_GM130_1
Dataset Kind Image data
Dataset Size 48.6 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig7a_GM130_2
# 12735
Datast ID ExtFig7a_GM130_2
Dataset Kind Image data
Dataset Size 50.1 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig7a_GM130_3
# 12736
Datast ID ExtFig7a_GM130_3
Dataset Kind Image data
Dataset Size 49.7 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig7b_Giantin_1
# 12737
Datast ID ExtFig7b_Giantin_1
Dataset Kind Image data
Dataset Size 50.1 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig7b_Giantin_2
# 12738
Datast ID ExtFig7b_Giantin_2
Dataset Kind Image data
Dataset Size 48.6 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig7b_Giantin_3
# 12739
Datast ID ExtFig7b_Giantin_3
Dataset Kind Image data
Dataset Size 52.7 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig7c_TGN46_1
# 12740
Datast ID ExtFig7c_TGN46_1
Dataset Kind Image data
Dataset Size 48.6 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig7c_TGN46_2
# 12741
Datast ID ExtFig7c_TGN46_2
Dataset Kind Image data
Dataset Size 50.1 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig7c_TGN46_3
# 12742
Datast ID ExtFig7c_TGN46_3
Dataset Kind Image data
Dataset Size 61.8 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset VIdeo7_Ftractin_1
# 12743
Datast ID VIdeo7_Ftractin_1
Dataset Kind Image data
Dataset Size 859.8 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset VIdeo7_Ftractin_2
# 12744
Datast ID VIdeo7_Ftractin_2
Dataset Kind Image data
Dataset Size 573.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Video7_UtrCH_1
# 12745
Datast ID Video7_UtrCH_1
Dataset Kind Image data
Dataset Size 573.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Video7_UtrCH_2
# 12746
Datast ID Video7_UtrCH_2
Dataset Kind Image data
Dataset Size 573.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig8_Ftractin_CytD
# 12747
Dataset Kind Image data
Dataset Size 9.8 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig8_Ftractin_LatA
# 12748
Dataset Kind Image data
Dataset Size 9.8 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig8_UtrCH_CytD
# 12749
Datast ID ExtFig8_UtrCH_CytD
Dataset Kind Image data
Dataset Size 9.8 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset ExtFig8_UtrCH_LatA
# 12750
Datast ID ExtFig8_UtrCH_LatA
Dataset Kind Image data
Dataset Size 9.8 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5c_COX8a
# 12751
Datast ID Fig5c_COX8a
Dataset Kind Image data
Dataset Size 648.7 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Video10_COX8a
# 12752
Datast ID Video10_COX8a
Dataset Kind Image data
Dataset Size 3.9 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Video11_COX8a
# 12753
Datast ID Video11_COX8a
Dataset Kind Image data
Dataset Size 2.0 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Video12_COX8a_reagent_1
# 12754
Dataset Kind Image data
Dataset Size 3.1 GB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Video12_COX8a_reagent_2
# 12755
Dataset Kind Image data
Dataset Size 3.1 GB
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SSBD:OMERO
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