Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

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#
Dataset ID
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Size
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_114
# 3229
Datast ID Fig8-S8_Bz-Val_114
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_115
# 3230
Datast ID Fig8-S8_Bz-Val_115
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_116
# 3231
Datast ID Fig8-S8_Bz-Val_116
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_117
# 3232
Datast ID Fig8-S8_Bz-Val_117
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_118
# 3233
Datast ID Fig8-S8_Bz-Val_118
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_119
# 3234
Datast ID Fig8-S8_Bz-Val_119
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_120
# 3235
Datast ID Fig8-S8_Bz-Val_120
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_121
# 3236
Datast ID Fig8-S8_Bz-Val_121
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_122
# 3237
Datast ID Fig8-S8_Bz-Val_122
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_123
# 3238
Datast ID Fig8-S8_Bz-Val_123
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_124
# 3239
Datast ID Fig8-S8_Bz-Val_124
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_125
# 3240
Datast ID Fig8-S8_Bz-Val_125
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_126
# 3241
Datast ID Fig8-S8_Bz-Val_126
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_127
# 3242
Datast ID Fig8-S8_Bz-Val_127
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_128
# 3243
Datast ID Fig8-S8_Bz-Val_128
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_129
# 3244
Datast ID Fig8-S8_Bz-Val_129
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_130
# 3245
Datast ID Fig8-S8_Bz-Val_130
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_131
# 3246
Datast ID Fig8-S8_Bz-Val_131
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_132
# 3247
Datast ID Fig8-S8_Bz-Val_132
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_133
# 3248
Datast ID Fig8-S8_Bz-Val_133
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_134
# 3249
Datast ID Fig8-S8_Bz-Val_134
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_135
# 3250
Datast ID Fig8-S8_Bz-Val_135
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_136
# 3251
Datast ID Fig8-S8_Bz-Val_136
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_137
# 3252
Datast ID Fig8-S8_Bz-Val_137
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_138
# 3253
Datast ID Fig8-S8_Bz-Val_138
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_139
# 3254
Datast ID Fig8-S8_Bz-Val_139
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_140
# 3255
Datast ID Fig8-S8_Bz-Val_140
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_141
# 3256
Datast ID Fig8-S8_Bz-Val_141
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_142
# 3257
Datast ID Fig8-S8_Bz-Val_142
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_143
# 3258
Datast ID Fig8-S8_Bz-Val_143
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_144
# 3259
Datast ID Fig8-S8_Bz-Val_144
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_145
# 3260
Datast ID Fig8-S8_Bz-Val_145
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_146
# 3261
Datast ID Fig8-S8_Bz-Val_146
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_147
# 3262
Datast ID Fig8-S8_Bz-Val_147
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_148
# 3263
Datast ID Fig8-S8_Bz-Val_148
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_149
# 3264
Datast ID Fig8-S8_Bz-Val_149
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_150
# 3265
Datast ID Fig8-S8_Bz-Val_150
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_151
# 3266
Datast ID Fig8-S8_Bz-Val_151
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_152
# 3267
Datast ID Fig8-S8_Bz-Val_152
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_153
# 3268
Datast ID Fig8-S8_Bz-Val_153
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_154
# 3269
Datast ID Fig8-S8_Bz-Val_154
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_155
# 3270
Datast ID Fig8-S8_Bz-Val_155
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_156
# 3271
Datast ID Fig8-S8_Bz-Val_156
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_157
# 3272
Datast ID Fig8-S8_Bz-Val_157
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_158
# 3273
Datast ID Fig8-S8_Bz-Val_158
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_159
# 3274
Datast ID Fig8-S8_Bz-Val_159
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_1
# 3275
Datast ID Fig8-S8_Gua-Acp_1
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_2
# 3276
Datast ID Fig8-S8_Gua-Acp_2
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_3
# 3277
Datast ID Fig8-S8_Gua-Acp_3
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_4
# 3278
Datast ID Fig8-S8_Gua-Acp_4
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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