Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

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#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_64
# 3179
Datast ID Fig8-S8_Bz-Val_64
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_65
# 3180
Datast ID Fig8-S8_Bz-Val_65
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_66
# 3181
Datast ID Fig8-S8_Bz-Val_66
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_67
# 3182
Datast ID Fig8-S8_Bz-Val_67
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_68
# 3183
Datast ID Fig8-S8_Bz-Val_68
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_69
# 3184
Datast ID Fig8-S8_Bz-Val_69
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_70
# 3185
Datast ID Fig8-S8_Bz-Val_70
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_71
# 3186
Datast ID Fig8-S8_Bz-Val_71
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_72
# 3187
Datast ID Fig8-S8_Bz-Val_72
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_73
# 3188
Datast ID Fig8-S8_Bz-Val_73
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_74
# 3189
Datast ID Fig8-S8_Bz-Val_74
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_75
# 3190
Datast ID Fig8-S8_Bz-Val_75
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_76
# 3191
Datast ID Fig8-S8_Bz-Val_76
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_77
# 3192
Datast ID Fig8-S8_Bz-Val_77
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_78
# 3193
Datast ID Fig8-S8_Bz-Val_78
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_79
# 3194
Datast ID Fig8-S8_Bz-Val_79
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_80
# 3195
Datast ID Fig8-S8_Bz-Val_80
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_81
# 3196
Datast ID Fig8-S8_Bz-Val_81
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_82
# 3197
Datast ID Fig8-S8_Bz-Val_82
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_83
# 3198
Datast ID Fig8-S8_Bz-Val_83
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_84
# 3199
Datast ID Fig8-S8_Bz-Val_84
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_85
# 3200
Datast ID Fig8-S8_Bz-Val_85
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_86
# 3201
Datast ID Fig8-S8_Bz-Val_86
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_87
# 3202
Datast ID Fig8-S8_Bz-Val_87
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_88
# 3203
Datast ID Fig8-S8_Bz-Val_88
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_89
# 3204
Datast ID Fig8-S8_Bz-Val_89
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_90
# 3205
Datast ID Fig8-S8_Bz-Val_90
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_91
# 3206
Datast ID Fig8-S8_Bz-Val_91
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_92
# 3207
Datast ID Fig8-S8_Bz-Val_92
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_93
# 3208
Datast ID Fig8-S8_Bz-Val_93
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_94
# 3209
Datast ID Fig8-S8_Bz-Val_94
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_95
# 3210
Datast ID Fig8-S8_Bz-Val_95
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_96
# 3211
Datast ID Fig8-S8_Bz-Val_96
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_97
# 3212
Datast ID Fig8-S8_Bz-Val_97
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_98
# 3213
Datast ID Fig8-S8_Bz-Val_98
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_99
# 3214
Datast ID Fig8-S8_Bz-Val_99
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_100
# 3215
Datast ID Fig8-S8_Bz-Val_100
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_101
# 3216
Datast ID Fig8-S8_Bz-Val_101
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_102
# 3217
Datast ID Fig8-S8_Bz-Val_102
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_103
# 3218
Datast ID Fig8-S8_Bz-Val_103
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_104
# 3219
Datast ID Fig8-S8_Bz-Val_104
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_105
# 3220
Datast ID Fig8-S8_Bz-Val_105
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_106
# 3221
Datast ID Fig8-S8_Bz-Val_106
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_107
# 3222
Datast ID Fig8-S8_Bz-Val_107
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_108
# 3223
Datast ID Fig8-S8_Bz-Val_108
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_109
# 3224
Datast ID Fig8-S8_Bz-Val_109
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_110
# 3225
Datast ID Fig8-S8_Bz-Val_110
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_111
# 3226
Datast ID Fig8-S8_Bz-Val_111
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_112
# 3227
Datast ID Fig8-S8_Bz-Val_112
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_113
# 3228
Datast ID Fig8-S8_Bz-Val_113
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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