Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

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#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_55
# 3329
Datast ID Fig8-S8_Gua-Acp_55
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_56
# 3330
Datast ID Fig8-S8_Gua-Acp_56
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_57
# 3331
Datast ID Fig8-S8_Gua-Acp_57
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_58
# 3332
Datast ID Fig8-S8_Gua-Acp_58
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_59
# 3333
Datast ID Fig8-S8_Gua-Acp_59
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_60
# 3334
Datast ID Fig8-S8_Gua-Acp_60
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_61
# 3335
Datast ID Fig8-S8_Gua-Acp_61
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_62
# 3336
Datast ID Fig8-S8_Gua-Acp_62
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_63
# 3337
Datast ID Fig8-S8_Gua-Acp_63
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_64
# 3338
Datast ID Fig8-S8_Gua-Acp_64
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_65
# 3339
Datast ID Fig8-S8_Gua-Acp_65
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_66
# 3340
Datast ID Fig8-S8_Gua-Acp_66
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_67
# 3341
Datast ID Fig8-S8_Gua-Acp_67
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_68
# 3342
Datast ID Fig8-S8_Gua-Acp_68
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_69
# 3343
Datast ID Fig8-S8_Gua-Acp_69
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_70
# 3344
Datast ID Fig8-S8_Gua-Acp_70
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_71
# 3345
Datast ID Fig8-S8_Gua-Acp_71
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_72
# 3346
Datast ID Fig8-S8_Gua-Acp_72
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_73
# 3347
Datast ID Fig8-S8_Gua-Acp_73
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_74
# 3348
Datast ID Fig8-S8_Gua-Acp_74
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_75
# 3349
Datast ID Fig8-S8_Gua-Acp_75
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_76
# 3350
Datast ID Fig8-S8_Gua-Acp_76
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_77
# 3351
Datast ID Fig8-S8_Gua-Acp_77
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_78
# 3352
Datast ID Fig8-S8_Gua-Acp_78
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_79
# 3353
Datast ID Fig8-S8_Gua-Acp_79
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_80
# 3354
Datast ID Fig8-S8_Gua-Acp_80
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_81
# 3355
Datast ID Fig8-S8_Gua-Acp_81
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_82
# 3356
Datast ID Fig8-S8_Gua-Acp_82
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_83
# 3357
Datast ID Fig8-S8_Gua-Acp_83
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_84
# 3358
Datast ID Fig8-S8_Gua-Acp_84
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_85
# 3359
Datast ID Fig8-S8_Gua-Acp_85
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_86
# 3360
Datast ID Fig8-S8_Gua-Acp_86
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_87
# 3361
Datast ID Fig8-S8_Gua-Acp_87
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_88
# 3362
Datast ID Fig8-S8_Gua-Acp_88
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_89
# 3363
Datast ID Fig8-S8_Gua-Acp_89
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_90
# 3364
Datast ID Fig8-S8_Gua-Acp_90
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_91
# 3365
Datast ID Fig8-S8_Gua-Acp_91
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_92
# 3366
Datast ID Fig8-S8_Gua-Acp_92
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_93
# 3367
Datast ID Fig8-S8_Gua-Acp_93
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_94
# 3368
Datast ID Fig8-S8_Gua-Acp_94
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_95
# 3369
Datast ID Fig8-S8_Gua-Acp_95
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_96
# 3370
Datast ID Fig8-S8_Gua-Acp_96
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_97
# 3371
Datast ID Fig8-S8_Gua-Acp_97
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_98
# 3372
Datast ID Fig8-S8_Gua-Acp_98
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_99
# 3373
Datast ID Fig8-S8_Gua-Acp_99
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_100
# 3374
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_101
# 3375
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_102
# 3376
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_103
# 3377
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_104
# 3378
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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