Summary of 66-Iwata-CellDynOSNMT


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_5
# 3279
Datast ID Fig8-S8_Gua-Acp_5
Dataset Kind Image data
Dataset Size 37.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_6
# 3280
Datast ID Fig8-S8_Gua-Acp_6
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_7
# 3281
Datast ID Fig8-S8_Gua-Acp_7
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_8
# 3282
Datast ID Fig8-S8_Gua-Acp_8
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_9
# 3283
Datast ID Fig8-S8_Gua-Acp_9
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_10
# 3284
Datast ID Fig8-S8_Gua-Acp_10
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_11
# 3285
Datast ID Fig8-S8_Gua-Acp_11
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_12
# 3286
Datast ID Fig8-S8_Gua-Acp_12
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_13
# 3287
Datast ID Fig8-S8_Gua-Acp_13
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_14
# 3288
Datast ID Fig8-S8_Gua-Acp_14
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_15
# 3289
Datast ID Fig8-S8_Gua-Acp_15
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_16
# 3290
Datast ID Fig8-S8_Gua-Acp_16
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_17
# 3291
Datast ID Fig8-S8_Gua-Acp_17
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_18
# 3292
Datast ID Fig8-S8_Gua-Acp_18
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_19
# 3293
Datast ID Fig8-S8_Gua-Acp_19
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_20
# 3294
Datast ID Fig8-S8_Gua-Acp_20
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_21
# 3295
Datast ID Fig8-S8_Gua-Acp_21
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_22
# 3296
Datast ID Fig8-S8_Gua-Acp_22
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_23
# 3297
Datast ID Fig8-S8_Gua-Acp_23
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_24
# 3298
Datast ID Fig8-S8_Gua-Acp_24
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_25
# 3299
Datast ID Fig8-S8_Gua-Acp_25
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_26
# 3300
Datast ID Fig8-S8_Gua-Acp_26
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_27
# 3301
Datast ID Fig8-S8_Gua-Acp_27
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_28
# 3302
Datast ID Fig8-S8_Gua-Acp_28
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_29
# 3303
Datast ID Fig8-S8_Gua-Acp_29
Dataset Kind Image data
Dataset Size 36.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_30
# 3304
Datast ID Fig8-S8_Gua-Acp_30
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_31
# 3305
Datast ID Fig8-S8_Gua-Acp_31
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_32
# 3306
Datast ID Fig8-S8_Gua-Acp_32
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_33
# 3307
Datast ID Fig8-S8_Gua-Acp_33
Dataset Kind Image data
Dataset Size 35.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_34
# 3308
Datast ID Fig8-S8_Gua-Acp_34
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_35
# 3309
Datast ID Fig8-S8_Gua-Acp_35
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_36
# 3310
Datast ID Fig8-S8_Gua-Acp_36
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_37
# 3311
Datast ID Fig8-S8_Gua-Acp_37
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_38
# 3312
Datast ID Fig8-S8_Gua-Acp_38
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_39
# 3313
Datast ID Fig8-S8_Gua-Acp_39
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_40
# 3314
Datast ID Fig8-S8_Gua-Acp_40
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_41
# 3315
Datast ID Fig8-S8_Gua-Acp_41
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_42
# 3316
Datast ID Fig8-S8_Gua-Acp_42
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_43
# 3317
Datast ID Fig8-S8_Gua-Acp_43
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_44
# 3318
Datast ID Fig8-S8_Gua-Acp_44
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_45
# 3319
Datast ID Fig8-S8_Gua-Acp_45
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_46
# 3320
Datast ID Fig8-S8_Gua-Acp_46
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_47
# 3321
Datast ID Fig8-S8_Gua-Acp_47
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_48
# 3322
Datast ID Fig8-S8_Gua-Acp_48
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_49
# 3323
Datast ID Fig8-S8_Gua-Acp_49
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_50
# 3324
Datast ID Fig8-S8_Gua-Acp_50
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_51
# 3325
Datast ID Fig8-S8_Gua-Acp_51
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_52
# 3326
Datast ID Fig8-S8_Gua-Acp_52
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_53
# 3327
Datast ID Fig8-S8_Gua-Acp_53
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Gua-Acp_54
# 3328
Datast ID Fig8-S8_Gua-Acp_54
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data