Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

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#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_14
# 3129
Datast ID Fig8-S8_Bz-Val_14
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_15
# 3130
Datast ID Fig8-S8_Bz-Val_15
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_16
# 3131
Datast ID Fig8-S8_Bz-Val_16
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_17
# 3132
Datast ID Fig8-S8_Bz-Val_17
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_18
# 3133
Datast ID Fig8-S8_Bz-Val_18
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_19
# 3134
Datast ID Fig8-S8_Bz-Val_19
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_20
# 3135
Datast ID Fig8-S8_Bz-Val_20
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_21
# 3136
Datast ID Fig8-S8_Bz-Val_21
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_22
# 3137
Datast ID Fig8-S8_Bz-Val_22
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_23
# 3138
Datast ID Fig8-S8_Bz-Val_23
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_24
# 3139
Datast ID Fig8-S8_Bz-Val_24
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_25
# 3140
Datast ID Fig8-S8_Bz-Val_25
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_26
# 3141
Datast ID Fig8-S8_Bz-Val_26
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_27
# 3142
Datast ID Fig8-S8_Bz-Val_27
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_28
# 3143
Datast ID Fig8-S8_Bz-Val_28
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_29
# 3144
Datast ID Fig8-S8_Bz-Val_29
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_30
# 3145
Datast ID Fig8-S8_Bz-Val_30
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_31
# 3146
Datast ID Fig8-S8_Bz-Val_31
Dataset Kind Image data
Dataset Size 37.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_32
# 3147
Datast ID Fig8-S8_Bz-Val_32
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_33
# 3148
Datast ID Fig8-S8_Bz-Val_33
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_34
# 3149
Datast ID Fig8-S8_Bz-Val_34
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_35
# 3150
Datast ID Fig8-S8_Bz-Val_35
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_36
# 3151
Datast ID Fig8-S8_Bz-Val_36
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_37
# 3152
Datast ID Fig8-S8_Bz-Val_37
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_38
# 3153
Datast ID Fig8-S8_Bz-Val_38
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_39
# 3154
Datast ID Fig8-S8_Bz-Val_39
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_40
# 3155
Datast ID Fig8-S8_Bz-Val_40
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_41
# 3156
Datast ID Fig8-S8_Bz-Val_41
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_42
# 3157
Datast ID Fig8-S8_Bz-Val_42
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_43
# 3158
Datast ID Fig8-S8_Bz-Val_43
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_44
# 3159
Datast ID Fig8-S8_Bz-Val_44
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_45
# 3160
Datast ID Fig8-S8_Bz-Val_45
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_46
# 3161
Datast ID Fig8-S8_Bz-Val_46
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_47
# 3162
Datast ID Fig8-S8_Bz-Val_47
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_48
# 3163
Datast ID Fig8-S8_Bz-Val_48
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_49
# 3164
Datast ID Fig8-S8_Bz-Val_49
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_50
# 3165
Datast ID Fig8-S8_Bz-Val_50
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_51
# 3166
Datast ID Fig8-S8_Bz-Val_51
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_52
# 3167
Datast ID Fig8-S8_Bz-Val_52
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_53
# 3168
Datast ID Fig8-S8_Bz-Val_53
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_54
# 3169
Datast ID Fig8-S8_Bz-Val_54
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_55
# 3170
Datast ID Fig8-S8_Bz-Val_55
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_56
# 3171
Datast ID Fig8-S8_Bz-Val_56
Dataset Kind Image data
Dataset Size 35.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_57
# 3172
Datast ID Fig8-S8_Bz-Val_57
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_58
# 3173
Datast ID Fig8-S8_Bz-Val_58
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_59
# 3174
Datast ID Fig8-S8_Bz-Val_59
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_60
# 3175
Datast ID Fig8-S8_Bz-Val_60
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_61
# 3176
Datast ID Fig8-S8_Bz-Val_61
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_62
# 3177
Datast ID Fig8-S8_Bz-Val_62
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_63
# 3178
Datast ID Fig8-S8_Bz-Val_63
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
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