Summary of 66-Iwata-CellDynOSNMT


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_14
# 3079
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_15
# 3080
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_16
# 3081
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_17
# 3082
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_18
# 3083
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_19
# 3084
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_20
# 3085
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_21
# 3086
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_22
# 3087
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_23
# 3088
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_24
# 3089
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_25
# 3090
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_26
# 3091
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_27
# 3092
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_28
# 3093
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_29
# 3094
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_30
# 3095
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_31
# 3096
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_32
# 3097
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_33
# 3098
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_34
# 3099
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_35
# 3100
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_36
# 3101
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_37
# 3102
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_38
# 3103
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_39
# 3104
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_40
# 3105
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_41
# 3106
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_42
# 3107
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_43
# 3108
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_44
# 3109
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_45
# 3110
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_46
# 3111
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_47
# 3112
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_48
# 3113
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_49
# 3114
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_50
# 3115
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_1
# 3116
Datast ID Fig8-S8_Bz-Val_1
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_2
# 3117
Datast ID Fig8-S8_Bz-Val_2
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_3
# 3118
Datast ID Fig8-S8_Bz-Val_3
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_4
# 3119
Datast ID Fig8-S8_Bz-Val_4
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_5
# 3120
Datast ID Fig8-S8_Bz-Val_5
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_6
# 3121
Datast ID Fig8-S8_Bz-Val_6
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_7
# 3122
Datast ID Fig8-S8_Bz-Val_7
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_8
# 3123
Datast ID Fig8-S8_Bz-Val_8
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_9
# 3124
Datast ID Fig8-S8_Bz-Val_9
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_10
# 3125
Datast ID Fig8-S8_Bz-Val_10
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_11
# 3126
Datast ID Fig8-S8_Bz-Val_11
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_12
# 3127
Datast ID Fig8-S8_Bz-Val_12
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig8-S8_Bz-Val_13
# 3128
Datast ID Fig8-S8_Bz-Val_13
Dataset Kind Image data
Dataset Size 35.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data