Summary of 66-Iwata-CellDynOSNMT


SSBD:database
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SSBD:repository
SSBD:repository URL

Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_22
# 3029
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_23
# 3030
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_24
# 3031
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_25
# 3032
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_26
# 3033
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_27
# 3034
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_28
# 3035
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_29
# 3036
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_30
# 3037
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_31
# 3038
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_32
# 3039
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_33
# 3040
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_34
# 3041
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_35
# 3042
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_36
# 3043
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_37
# 3044
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_38
# 3045
Dataset Kind Image data
Dataset Size 143.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_39
# 3046
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_40
# 3047
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_41
# 3048
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_42
# 3049
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_43
# 3050
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_44
# 3051
Dataset Kind Image data
Dataset Size 143.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_45
# 3052
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_46
# 3053
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_47
# 3054
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_48
# 3055
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_49
# 3056
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_50
# 3057
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_51
# 3058
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_52
# 3059
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_53
# 3060
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_54
# 3061
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_55
# 3062
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_56
# 3063
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_57
# 3064
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_58
# 3065
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_1
# 3066
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_2
# 3067
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_3
# 3068
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_4
# 3069
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_5
# 3070
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_6
# 3071
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_7
# 3072
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_8
# 3073
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_9
# 3074
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_10
# 3075
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_11
# 3076
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_12
# 3077
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc100000_13
# 3078
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data