Summary of 66-Iwata-CellDynOSNMT


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SSBD:repository URL

Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_12
# 2979
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_13
# 2980
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_14
# 2981
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_15
# 2982
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_16
# 2983
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_17
# 2984
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_18
# 2985
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_19
# 2986
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_20
# 2987
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_21
# 2988
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_22
# 2989
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_23
# 2990
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_24
# 2991
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_25
# 2992
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_26
# 2993
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_27
# 2994
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_28
# 2995
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_29
# 2996
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_30
# 2997
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_31
# 2998
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_32
# 2999
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_33
# 3000
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_34
# 3001
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_35
# 3002
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_36
# 3003
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_37
# 3004
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_38
# 3005
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_39
# 3006
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_40
# 3007
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_1
# 3008
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_2
# 3009
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_3
# 3010
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_4
# 3011
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_5
# 3012
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_6
# 3013
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_7
# 3014
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_8
# 3015
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_9
# 3016
Dataset Kind Image data
Dataset Size 143.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_10
# 3017
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_11
# 3018
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_12
# 3019
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_13
# 3020
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_14
# 3021
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_15
# 3022
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_16
# 3023
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_17
# 3024
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_18
# 3025
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_19
# 3026
Dataset Kind Image data
Dataset Size 143.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_20
# 3027
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Conc10000_21
# 3028
Dataset Kind Image data
Dataset Size 143.4 MB
4D view
SSBD:OMERO
Download BDML
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