Summary of 66-Iwata-CellDynOSNMT


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_42
# 2929
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_43
# 2930
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_44
# 2931
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_45
# 2932
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_46
# 2933
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_47
# 2934
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_48
# 2935
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_1
# 2936
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_2
# 2937
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_3
# 2938
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_4
# 2939
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_5
# 2940
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_6
# 2941
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_7
# 2942
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_8
# 2943
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_9
# 2944
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_10
# 2945
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_11
# 2946
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_12
# 2947
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_13
# 2948
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_14
# 2949
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_15
# 2950
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_16
# 2951
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_17
# 2952
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_18
# 2953
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_19
# 2954
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_20
# 2955
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_21
# 2956
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_22
# 2957
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_23
# 2958
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_24
# 2959
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_25
# 2960
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_26
# 2961
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_27
# 2962
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_28
# 2963
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_29
# 2964
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_30
# 2965
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_31
# 2966
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Bz-EhxMixtureConc_32
# 2967
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_1
# 2968
Datast ID Fig7-S7_Conc1000_1
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_2
# 2969
Datast ID Fig7-S7_Conc1000_2
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_3
# 2970
Datast ID Fig7-S7_Conc1000_3
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_4
# 2971
Datast ID Fig7-S7_Conc1000_4
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_5
# 2972
Datast ID Fig7-S7_Conc1000_5
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_6
# 2973
Datast ID Fig7-S7_Conc1000_6
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_7
# 2974
Datast ID Fig7-S7_Conc1000_7
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_8
# 2975
Datast ID Fig7-S7_Conc1000_8
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_9
# 2976
Datast ID Fig7-S7_Conc1000_9
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_10
# 2977
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Conc1000_11
# 2978
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data