Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_25
# 2879
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_26
# 2880
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_27
# 2881
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_28
# 2882
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_29
# 2883
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_30
# 2884
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_31
# 2885
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_32
# 2886
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_33
# 2887
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_1
# 2888
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_2
# 2889
Dataset Kind Image data
Dataset Size 143.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_3
# 2890
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_4
# 2891
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_5
# 2892
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_6
# 2893
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_7
# 2894
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_8
# 2895
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_9
# 2896
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_10
# 2897
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_11
# 2898
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_12
# 2899
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_13
# 2900
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_14
# 2901
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_15
# 2902
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_16
# 2903
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_17
# 2904
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_18
# 2905
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_19
# 2906
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_20
# 2907
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_21
# 2908
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_22
# 2909
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_23
# 2910
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_24
# 2911
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_25
# 2912
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_26
# 2913
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_27
# 2914
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_28
# 2915
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_29
# 2916
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_30
# 2917
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_31
# 2918
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_32
# 2919
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_33
# 2920
Dataset Kind Image data
Dataset Size 140.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_34
# 2921
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_35
# 2922
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_36
# 2923
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_37
# 2924
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_38
# 2925
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_39
# 2926
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_40
# 2927
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig7-S7_Aa-ValMixtureConc_41
# 2928
Dataset Kind Image data
Dataset Size 143.3 MB
4D view
SSBD:OMERO
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