Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_8
# 2829
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_9
# 2830
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_10
# 2831
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_11
# 2832
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_12
# 2833
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_13
# 2834
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_14
# 2835
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_15
# 2836
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_16
# 2837
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_17
# 2838
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_18
# 2839
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_19
# 2840
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_20
# 2841
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_21
# 2842
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_22
# 2843
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_23
# 2844
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_24
# 2845
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_25
# 2846
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_26
# 2847
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_27
# 2848
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_28
# 2849
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_29
# 2850
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_30
# 2851
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_31
# 2852
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_32
# 2853
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse1_33
# 2854
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_1
# 2855
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_2
# 2856
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_3
# 2857
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_4
# 2858
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_5
# 2859
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_6
# 2860
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_7
# 2861
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_8
# 2862
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_9
# 2863
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_10
# 2864
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_11
# 2865
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_12
# 2866
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_13
# 2867
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_14
# 2868
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_15
# 2869
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_16
# 2870
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_17
# 2871
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_18
# 2872
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_19
# 2873
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_20
# 2874
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_21
# 2875
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_22
# 2876
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_23
# 2877
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Val-Bz_Mouse2_24
# 2878
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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