Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_9
# 2379
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_10
# 2380
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_11
# 2381
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_12
# 2382
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_13
# 2383
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_14
# 2384
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_15
# 2385
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_16
# 2386
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_17
# 2387
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_18
# 2388
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_19
# 2389
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_20
# 2390
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_21
# 2391
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_22
# 2392
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_23
# 2393
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_24
# 2394
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_25
# 2395
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_26
# 2396
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_27
# 2397
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_28
# 2398
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_29
# 2399
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_30
# 2400
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_31
# 2401
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_32
# 2402
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_33
# 2403
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_1
# 2404
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_2
# 2405
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_3
# 2406
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_4
# 2407
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_5
# 2408
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_6
# 2409
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_7
# 2410
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_8
# 2411
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_9
# 2412
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_10
# 2413
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_11
# 2414
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_12
# 2415
Dataset Kind Image data
Dataset Size 33.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_13
# 2416
Dataset Kind Image data
Dataset Size 33.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_14
# 2417
Dataset Kind Image data
Dataset Size 33.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_15
# 2418
Dataset Kind Image data
Dataset Size 33.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_16
# 2419
Dataset Kind Image data
Dataset Size 33.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_17
# 2420
Dataset Kind Image data
Dataset Size 33.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_18
# 2421
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_19
# 2422
Dataset Kind Image data
Dataset Size 33.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_20
# 2423
Dataset Kind Image data
Dataset Size 33.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_21
# 2424
Dataset Kind Image data
Dataset Size 33.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse2_22
# 2425
Dataset Kind Image data
Dataset Size 33.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_1
# 2426
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_2
# 2427
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_3
# 2428
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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