Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_24
# 2279
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_25
# 2280
Dataset Kind Image data
Dataset Size 31.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_26
# 2281
Dataset Kind Image data
Dataset Size 39.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_27
# 2282
Dataset Kind Image data
Dataset Size 39.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_28
# 2283
Dataset Kind Image data
Dataset Size 39.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_29
# 2284
Dataset Kind Image data
Dataset Size 39.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_30
# 2285
Dataset Kind Image data
Dataset Size 39.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_1
# 2286
Datast ID Fig5-S5_Val_FOV1_1
Dataset Kind Image data
Dataset Size 30.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_2
# 2287
Datast ID Fig5-S5_Val_FOV1_2
Dataset Kind Image data
Dataset Size 30.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_3
# 2288
Datast ID Fig5-S5_Val_FOV1_3
Dataset Kind Image data
Dataset Size 30.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_4
# 2289
Datast ID Fig5-S5_Val_FOV1_4
Dataset Kind Image data
Dataset Size 30.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_5
# 2290
Datast ID Fig5-S5_Val_FOV1_5
Dataset Kind Image data
Dataset Size 30.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_6
# 2291
Datast ID Fig5-S5_Val_FOV1_6
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_7
# 2292
Datast ID Fig5-S5_Val_FOV1_7
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_8
# 2293
Datast ID Fig5-S5_Val_FOV1_8
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_9
# 2294
Datast ID Fig5-S5_Val_FOV1_9
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_10
# 2295
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_11
# 2296
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_12
# 2297
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_13
# 2298
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_14
# 2299
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_15
# 2300
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_16
# 2301
Dataset Kind Image data
Dataset Size 36.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_17
# 2302
Dataset Kind Image data
Dataset Size 36.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_18
# 2303
Dataset Kind Image data
Dataset Size 36.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_19
# 2304
Dataset Kind Image data
Dataset Size 36.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_20
# 2305
Dataset Kind Image data
Dataset Size 36.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_21
# 2306
Dataset Kind Image data
Dataset Size 39.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_22
# 2307
Dataset Kind Image data
Dataset Size 39.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_23
# 2308
Dataset Kind Image data
Dataset Size 39.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_24
# 2309
Dataset Kind Image data
Dataset Size 39.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_25
# 2310
Dataset Kind Image data
Dataset Size 39.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_26
# 2311
Dataset Kind Image data
Dataset Size 27.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_27
# 2312
Dataset Kind Image data
Dataset Size 27.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_28
# 2313
Dataset Kind Image data
Dataset Size 27.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_29
# 2314
Dataset Kind Image data
Dataset Size 27.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV1_30
# 2315
Dataset Kind Image data
Dataset Size 27.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_1
# 2316
Datast ID Fig5-S5_Val_FOV2_1
Dataset Kind Image data
Dataset Size 40.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_2
# 2317
Datast ID Fig5-S5_Val_FOV2_2
Dataset Kind Image data
Dataset Size 40.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_3
# 2318
Datast ID Fig5-S5_Val_FOV2_3
Dataset Kind Image data
Dataset Size 40.1 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_4
# 2319
Datast ID Fig5-S5_Val_FOV2_4
Dataset Kind Image data
Dataset Size 40.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_5
# 2320
Datast ID Fig5-S5_Val_FOV2_5
Dataset Kind Image data
Dataset Size 40.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_6
# 2321
Datast ID Fig5-S5_Val_FOV2_6
Dataset Kind Image data
Dataset Size 36.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_7
# 2322
Datast ID Fig5-S5_Val_FOV2_7
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_8
# 2323
Datast ID Fig5-S5_Val_FOV2_8
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_9
# 2324
Datast ID Fig5-S5_Val_FOV2_9
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_10
# 2325
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_11
# 2326
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_12
# 2327
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_13
# 2328
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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