Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_4
# 2429
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_5
# 2430
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_6
# 2431
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_7
# 2432
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_8
# 2433
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_9
# 2434
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_10
# 2435
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_11
# 2436
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_12
# 2437
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_13
# 2438
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_14
# 2439
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_15
# 2440
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_16
# 2441
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_17
# 2442
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_18
# 2443
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_19
# 2444
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_20
# 2445
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_21
# 2446
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse3_22
# 2447
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse1_1
# 2448
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse1_2
# 2449
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse1_3
# 2450
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse1_4
# 2451
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse1_5
# 2452
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse1_6
# 2453
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse1_7
# 2454
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse1_8
# 2455
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse1_9
# 2456
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse1_10
# 2457
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse1_11
# 2458
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse2_1
# 2459
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse2_2
# 2460
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse2_3
# 2461
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse2_4
# 2462
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse2_5
# 2463
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse2_6
# 2464
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse2_7
# 2465
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse2_8
# 2466
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse2_9
# 2467
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse2_10
# 2468
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse2_11
# 2469
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_1
# 2470
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_2
# 2471
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_3
# 2472
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_4
# 2473
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_5
# 2474
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_6
# 2475
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_7
# 2476
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_8
# 2477
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_9
# 2478
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data