Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_14
# 2329
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_15
# 2330
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_16
# 2331
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_17
# 2332
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_18
# 2333
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_19
# 2334
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_20
# 2335
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_21
# 2336
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_22
# 2337
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_23
# 2338
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_24
# 2339
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV2_25
# 2340
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_1
# 2341
Datast ID Fig5-S5_Val_FOV3_1
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_2
# 2342
Datast ID Fig5-S5_Val_FOV3_2
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_3
# 2343
Datast ID Fig5-S5_Val_FOV3_3
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_4
# 2344
Datast ID Fig5-S5_Val_FOV3_4
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_5
# 2345
Datast ID Fig5-S5_Val_FOV3_5
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_6
# 2346
Datast ID Fig5-S5_Val_FOV3_6
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_7
# 2347
Datast ID Fig5-S5_Val_FOV3_7
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_8
# 2348
Datast ID Fig5-S5_Val_FOV3_8
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_9
# 2349
Datast ID Fig5-S5_Val_FOV3_9
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_10
# 2350
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_11
# 2351
Dataset Kind Image data
Dataset Size 38.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_12
# 2352
Dataset Kind Image data
Dataset Size 38.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_13
# 2353
Dataset Kind Image data
Dataset Size 38.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_14
# 2354
Dataset Kind Image data
Dataset Size 38.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_15
# 2355
Dataset Kind Image data
Dataset Size 38.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_16
# 2356
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_17
# 2357
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_18
# 2358
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_19
# 2359
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_20
# 2360
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_21
# 2361
Dataset Kind Image data
Dataset Size 28.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_22
# 2362
Dataset Kind Image data
Dataset Size 28.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_23
# 2363
Dataset Kind Image data
Dataset Size 28.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_24
# 2364
Dataset Kind Image data
Dataset Size 28.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_25
# 2365
Dataset Kind Image data
Dataset Size 28.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_26
# 2366
Dataset Kind Image data
Dataset Size 29.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_27
# 2367
Dataset Kind Image data
Dataset Size 29.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_28
# 2368
Dataset Kind Image data
Dataset Size 29.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_29
# 2369
Dataset Kind Image data
Dataset Size 29.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Val_FOV3_30
# 2370
Dataset Kind Image data
Dataset Size 29.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_1
# 2371
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_2
# 2372
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_3
# 2373
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_4
# 2374
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_5
# 2375
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_6
# 2376
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_7
# 2377
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Aa-Ehx_Mouse1_8
# 2378
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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