Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_10
# 2479
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_11
# 2480
Dataset Kind Image data
Dataset Size 33.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_12
# 2481
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_13
# 2482
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_14
# 2483
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_15
# 2484
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_16
# 2485
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_17
# 2486
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_18
# 2487
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_19
# 2488
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_20
# 2489
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_21
# 2490
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_22
# 2491
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_23
# 2492
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_24
# 2493
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_25
# 2494
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_26
# 2495
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_27
# 2496
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_28
# 2497
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_29
# 2498
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_30
# 2499
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_31
# 2500
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_32
# 2501
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse3_33
# 2502
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_1
# 2503
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_2
# 2504
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_3
# 2505
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_4
# 2506
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_5
# 2507
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_6
# 2508
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_7
# 2509
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_8
# 2510
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_9
# 2511
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_10
# 2512
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_11
# 2513
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_12
# 2514
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_13
# 2515
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_14
# 2516
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_15
# 2517
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_16
# 2518
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_17
# 2519
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_18
# 2520
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_19
# 2521
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_20
# 2522
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_21
# 2523
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua_Mouse4_22
# 2524
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua-mixture_Mouse1_1
# 2525
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua-mixture_Mouse1_2
# 2526
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua-mixture_Mouse1_3
# 2527
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig6-S6_Acp-Gua-mixture_Mouse1_4
# 2528
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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