Summary of 66-Iwata-CellDynOSNMT


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_9
# 2229
Datast ID Fig5-S5_Oca_FOV1_9
Dataset Kind Image data
Dataset Size 27.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_10
# 2230
Dataset Kind Image data
Dataset Size 27.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_11
# 2231
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_12
# 2232
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_13
# 2233
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_14
# 2234
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_15
# 2235
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_16
# 2236
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_17
# 2237
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_18
# 2238
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_19
# 2239
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_20
# 2240
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_1
# 2241
Datast ID Fig5-S5_Oca_FOV2_1
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_2
# 2242
Datast ID Fig5-S5_Oca_FOV2_2
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_3
# 2243
Datast ID Fig5-S5_Oca_FOV2_3
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_4
# 2244
Datast ID Fig5-S5_Oca_FOV2_4
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_5
# 2245
Datast ID Fig5-S5_Oca_FOV2_5
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_6
# 2246
Datast ID Fig5-S5_Oca_FOV2_6
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_7
# 2247
Datast ID Fig5-S5_Oca_FOV2_7
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_8
# 2248
Datast ID Fig5-S5_Oca_FOV2_8
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_9
# 2249
Datast ID Fig5-S5_Oca_FOV2_9
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_10
# 2250
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_11
# 2251
Dataset Kind Image data
Dataset Size 36.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_12
# 2252
Dataset Kind Image data
Dataset Size 36.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_13
# 2253
Dataset Kind Image data
Dataset Size 36.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_14
# 2254
Dataset Kind Image data
Dataset Size 36.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV2_15
# 2255
Dataset Kind Image data
Dataset Size 36.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_1
# 2256
Datast ID Fig5-S5_Oca_FOV3_1
Dataset Kind Image data
Dataset Size 40.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_2
# 2257
Datast ID Fig5-S5_Oca_FOV3_2
Dataset Kind Image data
Dataset Size 40.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_3
# 2258
Datast ID Fig5-S5_Oca_FOV3_3
Dataset Kind Image data
Dataset Size 40.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_4
# 2259
Datast ID Fig5-S5_Oca_FOV3_4
Dataset Kind Image data
Dataset Size 40.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_5
# 2260
Datast ID Fig5-S5_Oca_FOV3_5
Dataset Kind Image data
Dataset Size 40.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_6
# 2261
Datast ID Fig5-S5_Oca_FOV3_6
Dataset Kind Image data
Dataset Size 30.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_7
# 2262
Datast ID Fig5-S5_Oca_FOV3_7
Dataset Kind Image data
Dataset Size 30.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_8
# 2263
Datast ID Fig5-S5_Oca_FOV3_8
Dataset Kind Image data
Dataset Size 30.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_9
# 2264
Datast ID Fig5-S5_Oca_FOV3_9
Dataset Kind Image data
Dataset Size 30.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_10
# 2265
Dataset Kind Image data
Dataset Size 30.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_11
# 2266
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_12
# 2267
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_13
# 2268
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_14
# 2269
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_15
# 2270
Dataset Kind Image data
Dataset Size 36.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_16
# 2271
Dataset Kind Image data
Dataset Size 40.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_17
# 2272
Dataset Kind Image data
Dataset Size 40.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_18
# 2273
Dataset Kind Image data
Dataset Size 40.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_19
# 2274
Dataset Kind Image data
Dataset Size 40.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_20
# 2275
Dataset Kind Image data
Dataset Size 40.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_21
# 2276
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_22
# 2277
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV3_23
# 2278
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data