Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_29
# 2179
Dataset Kind Image data
Dataset Size 28.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_30
# 2180
Dataset Kind Image data
Dataset Size 28.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_1
# 2181
Datast ID Fig5-S5_Hex_FOV1_1
Dataset Kind Image data
Dataset Size 30.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_2
# 2182
Datast ID Fig5-S5_Hex_FOV1_2
Dataset Kind Image data
Dataset Size 30.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_3
# 2183
Datast ID Fig5-S5_Hex_FOV1_3
Dataset Kind Image data
Dataset Size 30.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_4
# 2184
Datast ID Fig5-S5_Hex_FOV1_4
Dataset Kind Image data
Dataset Size 30.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_5
# 2185
Datast ID Fig5-S5_Hex_FOV1_5
Dataset Kind Image data
Dataset Size 30.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_6
# 2186
Datast ID Fig5-S5_Hex_FOV1_6
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_7
# 2187
Datast ID Fig5-S5_Hex_FOV1_7
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_8
# 2188
Datast ID Fig5-S5_Hex_FOV1_8
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_9
# 2189
Datast ID Fig5-S5_Hex_FOV1_9
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_10
# 2190
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_11
# 2191
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_12
# 2192
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_13
# 2193
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_14
# 2194
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_15
# 2195
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_16
# 2196
Dataset Kind Image data
Dataset Size 39.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_17
# 2197
Dataset Kind Image data
Dataset Size 39.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_18
# 2198
Dataset Kind Image data
Dataset Size 39.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_19
# 2199
Dataset Kind Image data
Dataset Size 39.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV1_20
# 2200
Dataset Kind Image data
Dataset Size 39.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_1
# 2201
Datast ID Fig5-S5_Hex_FOV2_1
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_2
# 2202
Datast ID Fig5-S5_Hex_FOV2_2
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_3
# 2203
Datast ID Fig5-S5_Hex_FOV2_3
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_4
# 2204
Datast ID Fig5-S5_Hex_FOV2_4
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_5
# 2205
Datast ID Fig5-S5_Hex_FOV2_5
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_6
# 2206
Datast ID Fig5-S5_Hex_FOV2_6
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_7
# 2207
Datast ID Fig5-S5_Hex_FOV2_7
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_8
# 2208
Datast ID Fig5-S5_Hex_FOV2_8
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_9
# 2209
Datast ID Fig5-S5_Hex_FOV2_9
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_10
# 2210
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_11
# 2211
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_12
# 2212
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_13
# 2213
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_14
# 2214
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_15
# 2215
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_16
# 2216
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_17
# 2217
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_18
# 2218
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_19
# 2219
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Hex_FOV2_20
# 2220
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_1
# 2221
Datast ID Fig5-S5_Oca_FOV1_1
Dataset Kind Image data
Dataset Size 40.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_2
# 2222
Datast ID Fig5-S5_Oca_FOV1_2
Dataset Kind Image data
Dataset Size 40.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_3
# 2223
Datast ID Fig5-S5_Oca_FOV1_3
Dataset Kind Image data
Dataset Size 40.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_4
# 2224
Datast ID Fig5-S5_Oca_FOV1_4
Dataset Kind Image data
Dataset Size 40.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_5
# 2225
Datast ID Fig5-S5_Oca_FOV1_5
Dataset Kind Image data
Dataset Size 40.4 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_6
# 2226
Datast ID Fig5-S5_Oca_FOV1_6
Dataset Kind Image data
Dataset Size 27.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_7
# 2227
Datast ID Fig5-S5_Oca_FOV1_7
Dataset Kind Image data
Dataset Size 27.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Oca_FOV1_8
# 2228
Datast ID Fig5-S5_Oca_FOV1_8
Dataset Kind Image data
Dataset Size 27.2 MB
4D view
SSBD:OMERO
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