Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_19
# 2129
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_20
# 2130
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_1
# 2131
Datast ID Fig5-S5_Gua_FOV1_1
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_2
# 2132
Datast ID Fig5-S5_Gua_FOV1_2
Dataset Kind Image data
Dataset Size 41.9 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_3
# 2133
Datast ID Fig5-S5_Gua_FOV1_3
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_4
# 2134
Datast ID Fig5-S5_Gua_FOV1_4
Dataset Kind Image data
Dataset Size 41.9 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_5
# 2135
Datast ID Fig5-S5_Gua_FOV1_5
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_6
# 2136
Datast ID Fig5-S5_Gua_FOV1_6
Dataset Kind Image data
Dataset Size 39.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_7
# 2137
Datast ID Fig5-S5_Gua_FOV1_7
Dataset Kind Image data
Dataset Size 39.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_8
# 2138
Datast ID Fig5-S5_Gua_FOV1_8
Dataset Kind Image data
Dataset Size 39.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_9
# 2139
Datast ID Fig5-S5_Gua_FOV1_9
Dataset Kind Image data
Dataset Size 39.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_10
# 2140
Dataset Kind Image data
Dataset Size 39.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_11
# 2141
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_12
# 2142
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_13
# 2143
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_14
# 2144
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_15
# 2145
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_16
# 2146
Dataset Kind Image data
Dataset Size 36.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_17
# 2147
Dataset Kind Image data
Dataset Size 36.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_18
# 2148
Dataset Kind Image data
Dataset Size 36.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_19
# 2149
Dataset Kind Image data
Dataset Size 36.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV1_20
# 2150
Dataset Kind Image data
Dataset Size 36.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_1
# 2151
Datast ID Fig5-S5_Gua_FOV2_1
Dataset Kind Image data
Dataset Size 36.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_2
# 2152
Datast ID Fig5-S5_Gua_FOV2_2
Dataset Kind Image data
Dataset Size 36.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_3
# 2153
Datast ID Fig5-S5_Gua_FOV2_3
Dataset Kind Image data
Dataset Size 36.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_4
# 2154
Datast ID Fig5-S5_Gua_FOV2_4
Dataset Kind Image data
Dataset Size 36.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_5
# 2155
Datast ID Fig5-S5_Gua_FOV2_5
Dataset Kind Image data
Dataset Size 36.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_6
# 2156
Datast ID Fig5-S5_Gua_FOV2_6
Dataset Kind Image data
Dataset Size 37.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_7
# 2157
Datast ID Fig5-S5_Gua_FOV2_7
Dataset Kind Image data
Dataset Size 37.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_8
# 2158
Datast ID Fig5-S5_Gua_FOV2_8
Dataset Kind Image data
Dataset Size 37.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_9
# 2159
Datast ID Fig5-S5_Gua_FOV2_9
Dataset Kind Image data
Dataset Size 37.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_10
# 2160
Dataset Kind Image data
Dataset Size 37.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_11
# 2161
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_12
# 2162
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_13
# 2163
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_14
# 2164
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_15
# 2165
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_16
# 2166
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_17
# 2167
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_18
# 2168
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_19
# 2169
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_20
# 2170
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_21
# 2171
Dataset Kind Image data
Dataset Size 37.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_22
# 2172
Dataset Kind Image data
Dataset Size 37.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_23
# 2173
Dataset Kind Image data
Dataset Size 37.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_24
# 2174
Dataset Kind Image data
Dataset Size 37.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_25
# 2175
Dataset Kind Image data
Dataset Size 37.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_26
# 2176
Dataset Kind Image data
Dataset Size 28.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_27
# 2177
Dataset Kind Image data
Dataset Size 28.5 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Gua_FOV2_28
# 2178
Dataset Kind Image data
Dataset Size 28.5 MB
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SSBD:OMERO
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