Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_9
# 2079
Datast ID Fig5-S5_Bz_FOV2_9
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_10
# 2080
Datast ID Fig5-S5_Bz_FOV2_10
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_11
# 2081
Datast ID Fig5-S5_Bz_FOV2_11
Dataset Kind Image data
Dataset Size 38.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_12
# 2082
Datast ID Fig5-S5_Bz_FOV2_12
Dataset Kind Image data
Dataset Size 38.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_13
# 2083
Datast ID Fig5-S5_Bz_FOV2_13
Dataset Kind Image data
Dataset Size 38.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_14
# 2084
Datast ID Fig5-S5_Bz_FOV2_14
Dataset Kind Image data
Dataset Size 38.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_15
# 2085
Datast ID Fig5-S5_Bz_FOV2_15
Dataset Kind Image data
Dataset Size 38.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_1
# 2086
Datast ID Fig5-S5_Ehx_FOV1_1
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_2
# 2087
Datast ID Fig5-S5_Ehx_FOV1_2
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_3
# 2088
Datast ID Fig5-S5_Ehx_FOV1_3
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_4
# 2089
Datast ID Fig5-S5_Ehx_FOV1_4
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_5
# 2090
Datast ID Fig5-S5_Ehx_FOV1_5
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_6
# 2091
Datast ID Fig5-S5_Ehx_FOV1_6
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_7
# 2092
Datast ID Fig5-S5_Ehx_FOV1_7
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_8
# 2093
Datast ID Fig5-S5_Ehx_FOV1_8
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_9
# 2094
Datast ID Fig5-S5_Ehx_FOV1_9
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_10
# 2095
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_11
# 2096
Dataset Kind Image data
Dataset Size 41.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_12
# 2097
Dataset Kind Image data
Dataset Size 41.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_13
# 2098
Dataset Kind Image data
Dataset Size 41.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_14
# 2099
Dataset Kind Image data
Dataset Size 41.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_15
# 2100
Dataset Kind Image data
Dataset Size 41.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_16
# 2101
Dataset Kind Image data
Dataset Size 40.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_17
# 2102
Dataset Kind Image data
Dataset Size 40.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_18
# 2103
Dataset Kind Image data
Dataset Size 40.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_19
# 2104
Dataset Kind Image data
Dataset Size 40.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_20
# 2105
Dataset Kind Image data
Dataset Size 40.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_21
# 2106
Dataset Kind Image data
Dataset Size 27.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_22
# 2107
Dataset Kind Image data
Dataset Size 27.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_23
# 2108
Dataset Kind Image data
Dataset Size 27.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_24
# 2109
Dataset Kind Image data
Dataset Size 27.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV1_25
# 2110
Dataset Kind Image data
Dataset Size 27.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_1
# 2111
Datast ID Fig5-S5_Ehx_FOV2_1
Dataset Kind Image data
Dataset Size 40.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_2
# 2112
Datast ID Fig5-S5_Ehx_FOV2_2
Dataset Kind Image data
Dataset Size 40.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_3
# 2113
Datast ID Fig5-S5_Ehx_FOV2_3
Dataset Kind Image data
Dataset Size 40.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_4
# 2114
Datast ID Fig5-S5_Ehx_FOV2_4
Dataset Kind Image data
Dataset Size 40.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_5
# 2115
Datast ID Fig5-S5_Ehx_FOV2_5
Dataset Kind Image data
Dataset Size 40.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_6
# 2116
Datast ID Fig5-S5_Ehx_FOV2_6
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_7
# 2117
Datast ID Fig5-S5_Ehx_FOV2_7
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_8
# 2118
Datast ID Fig5-S5_Ehx_FOV2_8
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_9
# 2119
Datast ID Fig5-S5_Ehx_FOV2_9
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_10
# 2120
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_11
# 2121
Dataset Kind Image data
Dataset Size 38.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_12
# 2122
Dataset Kind Image data
Dataset Size 38.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_13
# 2123
Dataset Kind Image data
Dataset Size 38.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_14
# 2124
Dataset Kind Image data
Dataset Size 38.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_15
# 2125
Dataset Kind Image data
Dataset Size 38.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_16
# 2126
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_17
# 2127
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Ehx_FOV2_18
# 2128
Dataset Kind Image data
Dataset Size 41.3 MB
4D view
SSBD:OMERO
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