Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

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#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_4
# 2029
Datast ID Fig5-S5_Bu_FOV2_4
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_5
# 2030
Datast ID Fig5-S5_Bu_FOV2_5
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_6
# 2031
Datast ID Fig5-S5_Bu_FOV2_6
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_7
# 2032
Datast ID Fig5-S5_Bu_FOV2_7
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_8
# 2033
Datast ID Fig5-S5_Bu_FOV2_8
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_9
# 2034
Datast ID Fig5-S5_Bu_FOV2_9
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_10
# 2035
Datast ID Fig5-S5_Bu_FOV2_10
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_11
# 2036
Datast ID Fig5-S5_Bu_FOV2_11
Dataset Kind Image data
Dataset Size 36.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_12
# 2037
Datast ID Fig5-S5_Bu_FOV2_12
Dataset Kind Image data
Dataset Size 36.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_13
# 2038
Datast ID Fig5-S5_Bu_FOV2_13
Dataset Kind Image data
Dataset Size 36.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_14
# 2039
Datast ID Fig5-S5_Bu_FOV2_14
Dataset Kind Image data
Dataset Size 36.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_15
# 2040
Datast ID Fig5-S5_Bu_FOV2_15
Dataset Kind Image data
Dataset Size 36.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_16
# 2041
Datast ID Fig5-S5_Bu_FOV2_16
Dataset Kind Image data
Dataset Size 36.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_17
# 2042
Datast ID Fig5-S5_Bu_FOV2_17
Dataset Kind Image data
Dataset Size 36.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_18
# 2043
Datast ID Fig5-S5_Bu_FOV2_18
Dataset Kind Image data
Dataset Size 36.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_19
# 2044
Datast ID Fig5-S5_Bu_FOV2_19
Dataset Kind Image data
Dataset Size 36.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_20
# 2045
Datast ID Fig5-S5_Bu_FOV2_20
Dataset Kind Image data
Dataset Size 36.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_1
# 2046
Datast ID Fig5-S5_Bz_FOV1_1
Dataset Kind Image data
Dataset Size 37.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_2
# 2047
Datast ID Fig5-S5_Bz_FOV1_2
Dataset Kind Image data
Dataset Size 37.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_3
# 2048
Datast ID Fig5-S5_Bz_FOV1_3
Dataset Kind Image data
Dataset Size 37.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_4
# 2049
Datast ID Fig5-S5_Bz_FOV1_4
Dataset Kind Image data
Dataset Size 37.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_5
# 2050
Datast ID Fig5-S5_Bz_FOV1_5
Dataset Kind Image data
Dataset Size 37.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_6
# 2051
Datast ID Fig5-S5_Bz_FOV1_6
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_7
# 2052
Datast ID Fig5-S5_Bz_FOV1_7
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_8
# 2053
Datast ID Fig5-S5_Bz_FOV1_8
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_9
# 2054
Datast ID Fig5-S5_Bz_FOV1_9
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_10
# 2055
Datast ID Fig5-S5_Bz_FOV1_10
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_11
# 2056
Datast ID Fig5-S5_Bz_FOV1_11
Dataset Kind Image data
Dataset Size 37.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_12
# 2057
Datast ID Fig5-S5_Bz_FOV1_12
Dataset Kind Image data
Dataset Size 37.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_13
# 2058
Datast ID Fig5-S5_Bz_FOV1_13
Dataset Kind Image data
Dataset Size 37.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_14
# 2059
Datast ID Fig5-S5_Bz_FOV1_14
Dataset Kind Image data
Dataset Size 37.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_15
# 2060
Datast ID Fig5-S5_Bz_FOV1_15
Dataset Kind Image data
Dataset Size 37.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_16
# 2061
Datast ID Fig5-S5_Bz_FOV1_16
Dataset Kind Image data
Dataset Size 28.9 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_17
# 2062
Datast ID Fig5-S5_Bz_FOV1_17
Dataset Kind Image data
Dataset Size 28.9 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_18
# 2063
Datast ID Fig5-S5_Bz_FOV1_18
Dataset Kind Image data
Dataset Size 28.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_19
# 2064
Datast ID Fig5-S5_Bz_FOV1_19
Dataset Kind Image data
Dataset Size 28.9 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_20
# 2065
Datast ID Fig5-S5_Bz_FOV1_20
Dataset Kind Image data
Dataset Size 28.9 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_21
# 2066
Datast ID Fig5-S5_Bz_FOV1_21
Dataset Kind Image data
Dataset Size 31.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_22
# 2067
Datast ID Fig5-S5_Bz_FOV1_22
Dataset Kind Image data
Dataset Size 31.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_23
# 2068
Datast ID Fig5-S5_Bz_FOV1_23
Dataset Kind Image data
Dataset Size 31.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_24
# 2069
Datast ID Fig5-S5_Bz_FOV1_24
Dataset Kind Image data
Dataset Size 31.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV1_25
# 2070
Datast ID Fig5-S5_Bz_FOV1_25
Dataset Kind Image data
Dataset Size 31.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_1
# 2071
Datast ID Fig5-S5_Bz_FOV2_1
Dataset Kind Image data
Dataset Size 36.5 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_2
# 2072
Datast ID Fig5-S5_Bz_FOV2_2
Dataset Kind Image data
Dataset Size 36.5 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_3
# 2073
Datast ID Fig5-S5_Bz_FOV2_3
Dataset Kind Image data
Dataset Size 36.5 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_4
# 2074
Datast ID Fig5-S5_Bz_FOV2_4
Dataset Kind Image data
Dataset Size 36.5 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_5
# 2075
Datast ID Fig5-S5_Bz_FOV2_5
Dataset Kind Image data
Dataset Size 36.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_6
# 2076
Datast ID Fig5-S5_Bz_FOV2_6
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_7
# 2077
Datast ID Fig5-S5_Bz_FOV2_7
Dataset Kind Image data
Dataset Size 37.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bz_FOV2_8
# 2078
Datast ID Fig5-S5_Bz_FOV2_8
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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