Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_14
# 1979
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_15
# 1980
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_16
# 1981
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_17
# 1982
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_18
# 1983
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_19
# 1984
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_20
# 1985
Dataset Kind Image data
Dataset Size 31.1 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_21
# 1986
Dataset Kind Image data
Dataset Size 41.7 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_22
# 1987
Dataset Kind Image data
Dataset Size 41.7 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_23
# 1988
Dataset Kind Image data
Dataset Size 41.7 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_24
# 1989
Dataset Kind Image data
Dataset Size 41.7 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_25
# 1990
Dataset Kind Image data
Dataset Size 41.7 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_26
# 1991
Dataset Kind Image data
Dataset Size 36.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_27
# 1992
Dataset Kind Image data
Dataset Size 36.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_28
# 1993
Dataset Kind Image data
Dataset Size 36.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_29
# 1994
Dataset Kind Image data
Dataset Size 36.5 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_30
# 1995
Dataset Kind Image data
Dataset Size 36.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_1
# 1996
Datast ID Fig5-S5_Bu_FOV1_1
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_2
# 1997
Datast ID Fig5-S5_Bu_FOV1_2
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_3
# 1998
Datast ID Fig5-S5_Bu_FOV1_3
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_4
# 1999
Datast ID Fig5-S5_Bu_FOV1_4
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_5
# 2000
Datast ID Fig5-S5_Bu_FOV1_5
Dataset Kind Image data
Dataset Size 38.5 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_6
# 2001
Datast ID Fig5-S5_Bu_FOV1_6
Dataset Kind Image data
Dataset Size 35.7 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_7
# 2002
Datast ID Fig5-S5_Bu_FOV1_7
Dataset Kind Image data
Dataset Size 35.7 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_8
# 2003
Datast ID Fig5-S5_Bu_FOV1_8
Dataset Kind Image data
Dataset Size 35.7 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_9
# 2004
Datast ID Fig5-S5_Bu_FOV1_9
Dataset Kind Image data
Dataset Size 35.7 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_10
# 2005
Datast ID Fig5-S5_Bu_FOV1_10
Dataset Kind Image data
Dataset Size 35.7 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_11
# 2006
Datast ID Fig5-S5_Bu_FOV1_11
Dataset Kind Image data
Dataset Size 38.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_12
# 2007
Datast ID Fig5-S5_Bu_FOV1_12
Dataset Kind Image data
Dataset Size 38.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_13
# 2008
Datast ID Fig5-S5_Bu_FOV1_13
Dataset Kind Image data
Dataset Size 38.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_14
# 2009
Datast ID Fig5-S5_Bu_FOV1_14
Dataset Kind Image data
Dataset Size 38.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_15
# 2010
Datast ID Fig5-S5_Bu_FOV1_15
Dataset Kind Image data
Dataset Size 38.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_16
# 2011
Datast ID Fig5-S5_Bu_FOV1_16
Dataset Kind Image data
Dataset Size 39.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_17
# 2012
Datast ID Fig5-S5_Bu_FOV1_17
Dataset Kind Image data
Dataset Size 39.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_18
# 2013
Datast ID Fig5-S5_Bu_FOV1_18
Dataset Kind Image data
Dataset Size 39.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_19
# 2014
Datast ID Fig5-S5_Bu_FOV1_19
Dataset Kind Image data
Dataset Size 39.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_20
# 2015
Datast ID Fig5-S5_Bu_FOV1_20
Dataset Kind Image data
Dataset Size 39.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_21
# 2016
Datast ID Fig5-S5_Bu_FOV1_21
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_22
# 2017
Datast ID Fig5-S5_Bu_FOV1_22
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_23
# 2018
Datast ID Fig5-S5_Bu_FOV1_23
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_24
# 2019
Datast ID Fig5-S5_Bu_FOV1_24
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_25
# 2020
Datast ID Fig5-S5_Bu_FOV1_25
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_26
# 2021
Datast ID Fig5-S5_Bu_FOV1_26
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_27
# 2022
Datast ID Fig5-S5_Bu_FOV1_27
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_28
# 2023
Datast ID Fig5-S5_Bu_FOV1_28
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_29
# 2024
Datast ID Fig5-S5_Bu_FOV1_29
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV1_30
# 2025
Datast ID Fig5-S5_Bu_FOV1_30
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_1
# 2026
Datast ID Fig5-S5_Bu_FOV2_1
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_2
# 2027
Datast ID Fig5-S5_Bu_FOV2_2
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Bu_FOV2_3
# 2028
Datast ID Fig5-S5_Bu_FOV2_3
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
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