Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_73_
# 1929
Datast ID Fig4E-G-S3H_73_
Dataset Kind Image data
Dataset Size 31.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_74
# 1930
Datast ID Fig4E-G-S3H_74
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_74_
# 1931
Datast ID Fig4E-G-S3H_74_
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_75
# 1932
Datast ID Fig4E-G-S3H_75
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_75_
# 1933
Datast ID Fig4E-G-S3H_75_
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_76
# 1934
Datast ID Fig4E-G-S3H_76
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_76_
# 1935
Datast ID Fig4E-G-S3H_76_
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_77
# 1936
Datast ID Fig4E-G-S3H_77
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_77_
# 1937
Datast ID Fig4E-G-S3H_77_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_78
# 1938
Datast ID Fig4E-G-S3H_78
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_78_
# 1939
Datast ID Fig4E-G-S3H_78_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_79
# 1940
Datast ID Fig4E-G-S3H_79
Dataset Kind Image data
Dataset Size 33.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_79_
# 1941
Datast ID Fig4E-G-S3H_79_
Dataset Kind Image data
Dataset Size 33.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_80
# 1942
Datast ID Fig4E-G-S3H_80
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_80_
# 1943
Datast ID Fig4E-G-S3H_80_
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_81
# 1944
Datast ID Fig4E-G-S3H_81
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_81_
# 1945
Datast ID Fig4E-G-S3H_81_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_1
# 1946
Datast ID Fig5-S5_Acp_FOV1_1
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_2
# 1947
Datast ID Fig5-S5_Acp_FOV1_2
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_3
# 1948
Datast ID Fig5-S5_Acp_FOV1_3
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_4
# 1949
Datast ID Fig5-S5_Acp_FOV1_4
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_5
# 1950
Datast ID Fig5-S5_Acp_FOV1_5
Dataset Kind Image data
Dataset Size 37.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_6
# 1951
Datast ID Fig5-S5_Acp_FOV1_6
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_7
# 1952
Datast ID Fig5-S5_Acp_FOV1_7
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_8
# 1953
Datast ID Fig5-S5_Acp_FOV1_8
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_9
# 1954
Datast ID Fig5-S5_Acp_FOV1_9
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_10
# 1955
Dataset Kind Image data
Dataset Size 39.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_11
# 1956
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_12
# 1957
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_13
# 1958
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_14
# 1959
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_15
# 1960
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_16
# 1961
Dataset Kind Image data
Dataset Size 37.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_17
# 1962
Dataset Kind Image data
Dataset Size 37.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_18
# 1963
Dataset Kind Image data
Dataset Size 37.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_19
# 1964
Dataset Kind Image data
Dataset Size 37.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV1_20
# 1965
Dataset Kind Image data
Dataset Size 37.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_1
# 1966
Datast ID Fig5-S5_Acp_FOV2_1
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_2
# 1967
Datast ID Fig5-S5_Acp_FOV2_2
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_3
# 1968
Datast ID Fig5-S5_Acp_FOV2_3
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_4
# 1969
Datast ID Fig5-S5_Acp_FOV2_4
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_5
# 1970
Datast ID Fig5-S5_Acp_FOV2_5
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_6
# 1971
Datast ID Fig5-S5_Acp_FOV2_6
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_7
# 1972
Datast ID Fig5-S5_Acp_FOV2_7
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_8
# 1973
Datast ID Fig5-S5_Acp_FOV2_8
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_9
# 1974
Datast ID Fig5-S5_Acp_FOV2_9
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_10
# 1975
Dataset Kind Image data
Dataset Size 37.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_11
# 1976
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_12
# 1977
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig5-S5_Acp_FOV2_13
# 1978
Dataset Kind Image data
Dataset Size 37.9 MB
4D view
SSBD:OMERO
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