Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_48_
# 1879
Datast ID Fig4E-G-S3H_48_
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_49
# 1880
Datast ID Fig4E-G-S3H_49
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_49_
# 1881
Datast ID Fig4E-G-S3H_49_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_50
# 1882
Datast ID Fig4E-G-S3H_50
Dataset Kind Image data
Dataset Size 32.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_50_
# 1883
Datast ID Fig4E-G-S3H_50_
Dataset Kind Image data
Dataset Size 32.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_51
# 1884
Datast ID Fig4E-G-S3H_51
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_51_
# 1885
Datast ID Fig4E-G-S3H_51_
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_52
# 1886
Datast ID Fig4E-G-S3H_52
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_52_
# 1887
Datast ID Fig4E-G-S3H_52_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_53
# 1888
Datast ID Fig4E-G-S3H_53
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_53_
# 1889
Datast ID Fig4E-G-S3H_53_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_54
# 1890
Datast ID Fig4E-G-S3H_54
Dataset Kind Image data
Dataset Size 32.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_54_
# 1891
Datast ID Fig4E-G-S3H_54_
Dataset Kind Image data
Dataset Size 32.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_55
# 1892
Datast ID Fig4E-G-S3H_55
Dataset Kind Image data
Dataset Size 31.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_55_
# 1893
Datast ID Fig4E-G-S3H_55_
Dataset Kind Image data
Dataset Size 31.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_56
# 1894
Datast ID Fig4E-G-S3H_56
Dataset Kind Image data
Dataset Size 33.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_56_
# 1895
Datast ID Fig4E-G-S3H_56_
Dataset Kind Image data
Dataset Size 33.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_57
# 1896
Datast ID Fig4E-G-S3H_57
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_57_
# 1897
Datast ID Fig4E-G-S3H_57_
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_58
# 1898
Datast ID Fig4E-G-S3H_58
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_58_
# 1899
Datast ID Fig4E-G-S3H_58_
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_59
# 1900
Datast ID Fig4E-G-S3H_59
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_59_
# 1901
Datast ID Fig4E-G-S3H_59_
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_60
# 1902
Datast ID Fig4E-G-S3H_60
Dataset Kind Image data
Dataset Size 33.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_60_
# 1903
Datast ID Fig4E-G-S3H_60_
Dataset Kind Image data
Dataset Size 33.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_61
# 1904
Datast ID Fig4E-G-S3H_61
Dataset Kind Image data
Dataset Size 32.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_61_
# 1905
Datast ID Fig4E-G-S3H_61_
Dataset Kind Image data
Dataset Size 32.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_62
# 1906
Datast ID Fig4E-G-S3H_62
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_62_
# 1907
Datast ID Fig4E-G-S3H_62_
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_63
# 1908
Datast ID Fig4E-G-S3H_63
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_63_
# 1909
Datast ID Fig4E-G-S3H_63_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_64
# 1910
Datast ID Fig4E-G-S3H_64
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_64_
# 1911
Datast ID Fig4E-G-S3H_64_
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_65
# 1912
Datast ID Fig4E-G-S3H_65
Dataset Kind Image data
Dataset Size 33.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_65_
# 1913
Datast ID Fig4E-G-S3H_65_
Dataset Kind Image data
Dataset Size 33.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_66
# 1914
Datast ID Fig4E-G-S3H_66
Dataset Kind Image data
Dataset Size 33.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_66_
# 1915
Datast ID Fig4E-G-S3H_66_
Dataset Kind Image data
Dataset Size 33.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_67
# 1916
Datast ID Fig4E-G-S3H_67
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_67_
# 1917
Datast ID Fig4E-G-S3H_67_
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_68
# 1918
Datast ID Fig4E-G-S3H_68
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_68_
# 1919
Datast ID Fig4E-G-S3H_68_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_69
# 1920
Datast ID Fig4E-G-S3H_69
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_69_
# 1921
Datast ID Fig4E-G-S3H_69_
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_70
# 1922
Datast ID Fig4E-G-S3H_70
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_70_
# 1923
Datast ID Fig4E-G-S3H_70_
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_71
# 1924
Datast ID Fig4E-G-S3H_71
Dataset Kind Image data
Dataset Size 32.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_71_
# 1925
Datast ID Fig4E-G-S3H_71_
Dataset Kind Image data
Dataset Size 32.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_72
# 1926
Datast ID Fig4E-G-S3H_72
Dataset Kind Image data
Dataset Size 32.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_72_
# 1927
Datast ID Fig4E-G-S3H_72_
Dataset Kind Image data
Dataset Size 32.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_73
# 1928
Datast ID Fig4E-G-S3H_73
Dataset Kind Image data
Dataset Size 31.2 MB
4D view
SSBD:OMERO
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