Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_23_
# 1829
Datast ID Fig4E-G-S3H_23_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_24
# 1830
Datast ID Fig4E-G-S3H_24
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_24_
# 1831
Datast ID Fig4E-G-S3H_24_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_25
# 1832
Datast ID Fig4E-G-S3H_25
Dataset Kind Image data
Dataset Size 32.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_25_
# 1833
Datast ID Fig4E-G-S3H_25_
Dataset Kind Image data
Dataset Size 32.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_26
# 1834
Datast ID Fig4E-G-S3H_26
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_26_
# 1835
Datast ID Fig4E-G-S3H_26_
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_27
# 1836
Datast ID Fig4E-G-S3H_27
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_27_
# 1837
Datast ID Fig4E-G-S3H_27_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_28
# 1838
Datast ID Fig4E-G-S3H_28
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_28_
# 1839
Datast ID Fig4E-G-S3H_28_
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_29
# 1840
Datast ID Fig4E-G-S3H_29
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_29_
# 1841
Datast ID Fig4E-G-S3H_29_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_30
# 1842
Datast ID Fig4E-G-S3H_30
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_30_
# 1843
Datast ID Fig4E-G-S3H_30_
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_31
# 1844
Datast ID Fig4E-G-S3H_31
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_31_
# 1845
Datast ID Fig4E-G-S3H_31_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_32
# 1846
Datast ID Fig4E-G-S3H_32
Dataset Kind Image data
Dataset Size 33.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_32_
# 1847
Datast ID Fig4E-G-S3H_32_
Dataset Kind Image data
Dataset Size 33.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_33
# 1848
Datast ID Fig4E-G-S3H_33
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_33_
# 1849
Datast ID Fig4E-G-S3H_33_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_34
# 1850
Datast ID Fig4E-G-S3H_34
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_34_
# 1851
Datast ID Fig4E-G-S3H_34_
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_35
# 1852
Datast ID Fig4E-G-S3H_35
Dataset Kind Image data
Dataset Size 33.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_35_
# 1853
Datast ID Fig4E-G-S3H_35_
Dataset Kind Image data
Dataset Size 33.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_36
# 1854
Datast ID Fig4E-G-S3H_36
Dataset Kind Image data
Dataset Size 32.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_36_
# 1855
Datast ID Fig4E-G-S3H_36_
Dataset Kind Image data
Dataset Size 32.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_37
# 1856
Datast ID Fig4E-G-S3H_37
Dataset Kind Image data
Dataset Size 33.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_37_
# 1857
Datast ID Fig4E-G-S3H_37_
Dataset Kind Image data
Dataset Size 33.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_38
# 1858
Datast ID Fig4E-G-S3H_38
Dataset Kind Image data
Dataset Size 32.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_38_
# 1859
Datast ID Fig4E-G-S3H_38_
Dataset Kind Image data
Dataset Size 32.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_39
# 1860
Datast ID Fig4E-G-S3H_39
Dataset Kind Image data
Dataset Size 32.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_39_
# 1861
Datast ID Fig4E-G-S3H_39_
Dataset Kind Image data
Dataset Size 32.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_40
# 1862
Datast ID Fig4E-G-S3H_40
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_40_
# 1863
Datast ID Fig4E-G-S3H_40_
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_41
# 1864
Datast ID Fig4E-G-S3H_41
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_41_
# 1865
Datast ID Fig4E-G-S3H_41_
Dataset Kind Image data
Dataset Size 32.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_42
# 1866
Datast ID Fig4E-G-S3H_42
Dataset Kind Image data
Dataset Size 32.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_42_
# 1867
Datast ID Fig4E-G-S3H_42_
Dataset Kind Image data
Dataset Size 32.5 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_43
# 1868
Datast ID Fig4E-G-S3H_43
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_43_
# 1869
Datast ID Fig4E-G-S3H_43_
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_44
# 1870
Datast ID Fig4E-G-S3H_44
Dataset Kind Image data
Dataset Size 32.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_44_
# 1871
Datast ID Fig4E-G-S3H_44_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_45
# 1872
Datast ID Fig4E-G-S3H_45
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_45_
# 1873
Datast ID Fig4E-G-S3H_45_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_46
# 1874
Datast ID Fig4E-G-S3H_46
Dataset Kind Image data
Dataset Size 32.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_46_
# 1875
Datast ID Fig4E-G-S3H_46_
Dataset Kind Image data
Dataset Size 32.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_47
# 1876
Datast ID Fig4E-G-S3H_47
Dataset Kind Image data
Dataset Size 31.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_47_
# 1877
Datast ID Fig4E-G-S3H_47_
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_48
# 1878
Datast ID Fig4E-G-S3H_48
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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