Summary of 120-Ding-CentromericDyn


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
Timelapse images and BDML file for quantitative information about the centromeric dynamics during mouse oocytes meiosis
Description
-
Release date
2021-09-30
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
351 ( Image datasets: 351, Quantitative data datasets: 0 )
Size of Datasets
720.8 GB ( Image datasets: 720.8 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Gene symbol(s)
Rec8, Sgo2, Smc3
Protein name(s)
ACA, ACA-C, AKA, CENP-C, H2B, PIAS, PIAS1, PIAS2, PIAS3, PIAS4, PP2A, SUMO1, SUMO2, SUMO2/3, SUMO3
Protein tag(s)
B56-mNG, SunTag, mCherry, mEGFP

Datatype
-
Molecular Function (MF)
-
Biological Process (BP)
meiotic cell cycle, centromeric sister chromatid cohesion
Cellular Component (CC)
chromosome, kinetochore
Biological Imaging Method
time lapse microscopy, fluorescence microscopy
X scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Y scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Z scale
1 micrometer/slice, 2.6 micrometer/slice, 2.5 micrometer/slice, 0.5 micrometer/slice, 3.9085 micrometer/slice, 1 micrometer/slice, 0.25 micrometer/slice, 1.2 micrometer/slice, 0.7 micrometer/slice, 0.8 micrometer/slice, 2.7 micrometer/slice, 1.5 micrometer/slice
T scale
2 minutes for each time interval, NA , 10 minutes for each time interval, 6 minutes for each time interval, 7 minutes for each time interval, 15 minutes for each time interval, 20 minutes for each time interval, 4 minutes for each time interval, 3 minutes for each time interval, NA

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Yi Ding, Masako Kaido, Elena Llano, Alberto M Pendas, Tomoya S Kitajima (2018) The Post-anaphase SUMO Pathway Ensures the Maintenance of Centromeric Cohesion through Meiosis I-II Transition in Mammalian Oocytes., Current biology : CB, Volume 28, Number 10, pp. 1661-1669.e4

Published in 2018 May 21 (Electronic publication in May 10, 2018, midnight )

(Abstract) The production of haploid gametes requires the maintenance of centromeric cohesion between sister chromatids through the transition between two successive meiotic divisions, meiosis I and meiosis II. One mechanism for the cohesion maintenance is shugoshin-dependent protection of centromeric cohesin at anaphase I onset [1-3]. However, how centromeric cohesion is maintained during late anaphase I and telophase I, when centromeric shugoshin is undetectable [1-3], remains largely unexplored. Here we show that the centromeric small ubiquitin-related modifier (SUMO) pathway is critical for the maintenance of centromeric cohesion during post-anaphase-I periods in mouse oocytes. SUMO2/3 and E3 ligase PIAS are enriched near centromeres during late anaphase I and telophase I. Specific perturbation of the centromeric SUMO pathway results in precocious loss of centromeric cohesin at telophase I, although shugoshin-dependent centromeric protection at anaphase I onset remains largely intact. Prevention of the SUMO perturbation during post-anaphase-I periods restores the maintenance of centromeric cohesion through the meiosis I-II transition. Thus, the post-anaphase-I centromeric SUMO pathway ensures continuous maintenance of centromeric cohesion through the meiosis I-II transition.
(MeSH Terms)

Contact
Tomoya S. Kitajima , RIKEN , Center for Biosystems Dynamics Research , Laboratory for Chromosome Segregation
Contributors

Dataset List of 120-Ding-CentromericDyn

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplus-image48
# 6011
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplus-image49
# 6012
Dataset Kind Image data
Dataset Size 20.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplus-image50
# 6013
Dataset Kind Image data
Dataset Size 29.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplus-image51
# 6014
Dataset Kind Image data
Dataset Size 27.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplusdnc-image36
# 6015
Dataset Kind Image data
Dataset Size 55.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplusdnc-image37
# 6016
Dataset Kind Image data
Dataset Size 45.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplusdnc-image38
# 6017
Dataset Kind Image data
Dataset Size 55.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplusdnc-image39-40
# 6018
Dataset Kind Image data
Dataset Size 65.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplusdnc-image41
# 6019
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplusdnc-image42
# 6020
Dataset Kind Image data
Dataset Size 51.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplusdnc-image43
# 6021
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplusdnc-image44
# 6022
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplusdnc-image45
# 6023
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplusdnc-image46-47
# 6024
Dataset Kind Image data
Dataset Size 75.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3E_171220_kt_tracking
# 6025
Dataset Kind Image data
Dataset Size 101.5 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3E_180129_Sgo2--
# 6026
Dataset Kind Image data
Dataset Size 101.5 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4A_160210_Rec8f
# 6027
Dataset Kind Image data
Dataset Size 4.4 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4A_160212_Rec8f_mut
# 6028
Dataset Kind Image data
Dataset Size 3.8 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4A_160224_Rec8f
# 6029
Dataset Kind Image data
Dataset Size 3.0 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4A_160224_Rec8f_mut
# 6030
Dataset Kind Image data
Dataset Size 4.8 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4B_170314_cl
# 6031
Datast ID FigS4B_170314_cl
Dataset Kind Image data
Dataset Size 848.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4B_170314_mut
# 6032
Datast ID FigS4B_170314_mut
Dataset Kind Image data
Dataset Size 572.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4B_170417_CL27
# 6033
Datast ID FigS4B_170417_CL27
Dataset Kind Image data
Dataset Size 458.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4B_170417_CLPIAS1
# 6034
Dataset Kind Image data
Dataset Size 194.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4B_170417_MUT25
# 6035
Dataset Kind Image data
Dataset Size 561.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4B_170417_MUTPIAS1
# 6036
Dataset Kind Image data
Dataset Size 249.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge1
# 6037
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge2
# 6038
Dataset Kind Image data
Dataset Size 52.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge3
# 6039
Dataset Kind Image data
Dataset Size 51.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge4
# 6040
Dataset Kind Image data
Dataset Size 46.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge5
# 6041
Dataset Kind Image data
Dataset Size 43.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge6
# 6042
Dataset Kind Image data
Dataset Size 43.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge7
# 6043
Dataset Kind Image data
Dataset Size 35.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge8
# 6044
Dataset Kind Image data
Dataset Size 40.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge9
# 6045
Dataset Kind Image data
Dataset Size 45.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge10
# 6046
Dataset Kind Image data
Dataset Size 43.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge11
# 6047
Dataset Kind Image data
Dataset Size 48.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge12
# 6048
Dataset Kind Image data
Dataset Size 45.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge13-15
# 6049
Dataset Kind Image data
Dataset Size 130.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge16
# 6050
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8f_iamge17-22
# 6051
Dataset Kind Image data
Dataset Size 277.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image23
# 6052
Dataset Kind Image data
Dataset Size 49.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image24
# 6053
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image25
# 6054
Dataset Kind Image data
Dataset Size 58.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image26
# 6055
Dataset Kind Image data
Dataset Size 48.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image27
# 6056
Dataset Kind Image data
Dataset Size 48.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image28
# 6057
Dataset Kind Image data
Dataset Size 51.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image29
# 6058
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image30
# 6059
Dataset Kind Image data
Dataset Size 43.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image31-33
# 6060
Dataset Kind Image data
Dataset Size 138.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data