Summary of 120-Ding-CentromericDyn


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
Timelapse images and BDML file for quantitative information about the centromeric dynamics during mouse oocytes meiosis
Description
-
Release date
2021-09-30
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
351 ( Image datasets: 351, Quantitative data datasets: 0 )
Size of Datasets
720.8 GB ( Image datasets: 720.8 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Gene symbol(s)
Rec8, Sgo2, Smc3
Protein name(s)
ACA, ACA-C, AKA, CENP-C, H2B, PIAS, PIAS1, PIAS2, PIAS3, PIAS4, PP2A, SUMO1, SUMO2, SUMO2/3, SUMO3
Protein tag(s)
B56-mNG, SunTag, mCherry, mEGFP

Datatype
-
Molecular Function (MF)
-
Biological Process (BP)
meiotic cell cycle, centromeric sister chromatid cohesion
Cellular Component (CC)
chromosome, kinetochore
Biological Imaging Method
time lapse microscopy, fluorescence microscopy
X scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Y scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Z scale
1 micrometer/slice, 2.6 micrometer/slice, 2.5 micrometer/slice, 0.5 micrometer/slice, 3.9085 micrometer/slice, 1 micrometer/slice, 0.25 micrometer/slice, 1.2 micrometer/slice, 0.7 micrometer/slice, 0.8 micrometer/slice, 2.7 micrometer/slice, 1.5 micrometer/slice
T scale
2 minutes for each time interval, NA , 10 minutes for each time interval, 6 minutes for each time interval, 7 minutes for each time interval, 15 minutes for each time interval, 20 minutes for each time interval, 4 minutes for each time interval, 3 minutes for each time interval, NA

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Yi Ding, Masako Kaido, Elena Llano, Alberto M Pendas, Tomoya S Kitajima (2018) The Post-anaphase SUMO Pathway Ensures the Maintenance of Centromeric Cohesion through Meiosis I-II Transition in Mammalian Oocytes., Current biology : CB, Volume 28, Number 10, pp. 1661-1669.e4

Published in 2018 May 21 (Electronic publication in May 10, 2018, midnight )

(Abstract) The production of haploid gametes requires the maintenance of centromeric cohesion between sister chromatids through the transition between two successive meiotic divisions, meiosis I and meiosis II. One mechanism for the cohesion maintenance is shugoshin-dependent protection of centromeric cohesin at anaphase I onset [1-3]. However, how centromeric cohesion is maintained during late anaphase I and telophase I, when centromeric shugoshin is undetectable [1-3], remains largely unexplored. Here we show that the centromeric small ubiquitin-related modifier (SUMO) pathway is critical for the maintenance of centromeric cohesion during post-anaphase-I periods in mouse oocytes. SUMO2/3 and E3 ligase PIAS are enriched near centromeres during late anaphase I and telophase I. Specific perturbation of the centromeric SUMO pathway results in precocious loss of centromeric cohesin at telophase I, although shugoshin-dependent centromeric protection at anaphase I onset remains largely intact. Prevention of the SUMO perturbation during post-anaphase-I periods restores the maintenance of centromeric cohesion through the meiosis I-II transition. Thus, the post-anaphase-I centromeric SUMO pathway ensures continuous maintenance of centromeric cohesion through the meiosis I-II transition.
(MeSH Terms)

Contact
Tomoya S. Kitajima , RIKEN , Center for Biosystems Dynamics Research , Laboratory for Chromosome Segregation
Contributors

Dataset List of 120-Ding-CentromericDyn

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset FigS1C_170803_SUMO3ga_1
# 5911
Dataset Kind Image data
Dataset Size 4.1 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1C_170803_SUMO3ga_2
# 5912
Dataset Kind Image data
Dataset Size 570.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1C_170803_SUMO3gg_1
# 5913
Dataset Kind Image data
Dataset Size 3.6 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1C_170803_SUMO3gg_2
# 5914
Dataset Kind Image data
Dataset Size 489.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1C_170803_UBC9_1
# 5915
Dataset Kind Image data
Dataset Size 2.4 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1C_170803_UBC9_2
# 5916
Dataset Kind Image data
Dataset Size 326.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1F_if_for_sumo1
# 5917
Dataset Kind Image data
Dataset Size 54.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS2A_160921_Sgo2
# 5918
Datast ID FigS2A_160921_Sgo2
Dataset Kind Image data
Dataset Size 27.1 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS2C_170420_egfp-pias1
# 5919
Dataset Kind Image data
Dataset Size 11.6 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS2C_170420_egfp-pias1dn
# 5920
Dataset Kind Image data
Dataset Size 8.9 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS2B_171216_PP2A-B56-mNG
# 5921
Dataset Kind Image data
Dataset Size 33.9 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS2D_sumo23level_control
# 5922
Dataset Kind Image data
Dataset Size 236.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS2D_sumo23level_neonpias1dn
# 5923
Dataset Kind Image data
Dataset Size 336.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_control
# 5924
Dataset Kind Image data
Dataset Size 121.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image5
# 5925
Dataset Kind Image data
Dataset Size 11.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image6
# 5926
Dataset Kind Image data
Dataset Size 14.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image7
# 5927
Dataset Kind Image data
Dataset Size 8.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image8
# 5928
Dataset Kind Image data
Dataset Size 12.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image9
# 5929
Dataset Kind Image data
Dataset Size 11.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image10
# 5930
Dataset Kind Image data
Dataset Size 13.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image11
# 5931
Dataset Kind Image data
Dataset Size 8.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image12
# 5932
Dataset Kind Image data
Dataset Size 12.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image13
# 5933
Dataset Kind Image data
Dataset Size 12.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image14
# 5934
Dataset Kind Image data
Dataset Size 10.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image36
# 5935
Dataset Kind Image data
Dataset Size 15.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image37
# 5936
Dataset Kind Image data
Dataset Size 21.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_control_image38
# 5937
Dataset Kind Image data
Dataset Size 23.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASdn_image15
# 5938
Dataset Kind Image data
Dataset Size 12.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASdn_image16
# 5939
Dataset Kind Image data
Dataset Size 17.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASdn_image17
# 5940
Dataset Kind Image data
Dataset Size 14.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASdn_image18
# 5941
Dataset Kind Image data
Dataset Size 13.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASdn_image19
# 5942
Dataset Kind Image data
Dataset Size 11.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASdn_image35
# 5943
Dataset Kind Image data
Dataset Size 20.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASdn_image39
# 5944
Dataset Kind Image data
Dataset Size 13.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASdn_image40
# 5945
Dataset Kind Image data
Dataset Size 11.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASdn_image41-49
# 5946
Dataset Kind Image data
Dataset Size 112.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASwt_image20
# 5947
Dataset Kind Image data
Dataset Size 10.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASwt_image21
# 5948
Dataset Kind Image data
Dataset Size 17.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASwt_image22
# 5949
Dataset Kind Image data
Dataset Size 17.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASwt_image23
# 5950
Dataset Kind Image data
Dataset Size 22.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASwt_image24
# 5951
Dataset Kind Image data
Dataset Size 28.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASwt_image25-27
# 5952
Dataset Kind Image data
Dataset Size 46.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASwt_image28
# 5953
Dataset Kind Image data
Dataset Size 12.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASwt_image29
# 5954
Dataset Kind Image data
Dataset Size 19.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_171231_MII_monastrol_cenpc_PIASwt_image30
# 5955
Dataset Kind Image data
Dataset Size 14.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_180213_cenpc
# 5956
Dataset Kind Image data
Dataset Size 114.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_180213_pias1cenpc_image1
# 5957
Dataset Kind Image data
Dataset Size 18.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_180213_pias1cenpc_image2
# 5958
Dataset Kind Image data
Dataset Size 16.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_180213_pias1cenpc_image3
# 5959
Dataset Kind Image data
Dataset Size 22.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_180213_pias1cenpc_image8
# 5960
Dataset Kind Image data
Dataset Size 36.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data