Summary of 120-Ding-CentromericDyn


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
Timelapse images and BDML file for quantitative information about the centromeric dynamics during mouse oocytes meiosis
Description
-
Release date
2021-09-30
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
351 ( Image datasets: 351, Quantitative data datasets: 0 )
Size of Datasets
720.8 GB ( Image datasets: 720.8 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Gene symbol(s)
Rec8, Sgo2, Smc3
Protein name(s)
ACA, ACA-C, AKA, CENP-C, H2B, PIAS, PIAS1, PIAS2, PIAS3, PIAS4, PP2A, SUMO1, SUMO2, SUMO2/3, SUMO3
Protein tag(s)
B56-mNG, SunTag, mCherry, mEGFP

Datatype
-
Molecular Function (MF)
-
Biological Process (BP)
meiotic cell cycle, centromeric sister chromatid cohesion
Cellular Component (CC)
chromosome, kinetochore
Biological Imaging Method
time lapse microscopy, fluorescence microscopy
X scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Y scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Z scale
1 micrometer/slice, 2.6 micrometer/slice, 2.5 micrometer/slice, 0.5 micrometer/slice, 3.9085 micrometer/slice, 1 micrometer/slice, 0.25 micrometer/slice, 1.2 micrometer/slice, 0.7 micrometer/slice, 0.8 micrometer/slice, 2.7 micrometer/slice, 1.5 micrometer/slice
T scale
2 minutes for each time interval, NA , 10 minutes for each time interval, 6 minutes for each time interval, 7 minutes for each time interval, 15 minutes for each time interval, 20 minutes for each time interval, 4 minutes for each time interval, 3 minutes for each time interval, NA

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Yi Ding, Masako Kaido, Elena Llano, Alberto M Pendas, Tomoya S Kitajima (2018) The Post-anaphase SUMO Pathway Ensures the Maintenance of Centromeric Cohesion through Meiosis I-II Transition in Mammalian Oocytes., Current biology : CB, Volume 28, Number 10, pp. 1661-1669.e4

Published in 2018 May 21 (Electronic publication in May 10, 2018, midnight )

(Abstract) The production of haploid gametes requires the maintenance of centromeric cohesion between sister chromatids through the transition between two successive meiotic divisions, meiosis I and meiosis II. One mechanism for the cohesion maintenance is shugoshin-dependent protection of centromeric cohesin at anaphase I onset [1-3]. However, how centromeric cohesion is maintained during late anaphase I and telophase I, when centromeric shugoshin is undetectable [1-3], remains largely unexplored. Here we show that the centromeric small ubiquitin-related modifier (SUMO) pathway is critical for the maintenance of centromeric cohesion during post-anaphase-I periods in mouse oocytes. SUMO2/3 and E3 ligase PIAS are enriched near centromeres during late anaphase I and telophase I. Specific perturbation of the centromeric SUMO pathway results in precocious loss of centromeric cohesin at telophase I, although shugoshin-dependent centromeric protection at anaphase I onset remains largely intact. Prevention of the SUMO perturbation during post-anaphase-I periods restores the maintenance of centromeric cohesion through the meiosis I-II transition. Thus, the post-anaphase-I centromeric SUMO pathway ensures continuous maintenance of centromeric cohesion through the meiosis I-II transition.
(MeSH Terms)

Contact
Tomoya S. Kitajima , RIKEN , Center for Biosystems Dynamics Research , Laboratory for Chromosome Segregation
Contributors

Dataset List of 120-Ding-CentromericDyn

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image34
# 6061
Dataset Kind Image data
Dataset Size 48.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image36-38
# 6062
Dataset Kind Image data
Dataset Size 142.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image39
# 6063
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image40
# 6064
Dataset Kind Image data
Dataset Size 51.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180115_Rec8fnc_image41
# 6065
Dataset Kind Image data
Dataset Size 51.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image28-30
# 6066
Dataset Kind Image data
Dataset Size 105.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image31
# 6067
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image32
# 6068
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image33
# 6069
Dataset Kind Image data
Dataset Size 37.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image34
# 6070
Dataset Kind Image data
Dataset Size 42.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image35
# 6071
Dataset Kind Image data
Dataset Size 36.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image36
# 6072
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image37
# 6073
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image38
# 6074
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image39
# 6075
Dataset Kind Image data
Dataset Size 29.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image40
# 6076
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image41
# 6077
Dataset Kind Image data
Dataset Size 36.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image42
# 6078
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image43
# 6079
Dataset Kind Image data
Dataset Size 36.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image44
# 6080
Dataset Kind Image data
Dataset Size 40.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image45
# 6081
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image46
# 6082
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image47
# 6083
Dataset Kind Image data
Dataset Size 23.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image48
# 6084
Dataset Kind Image data
Dataset Size 38.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8f_cl_image49
# 6085
Dataset Kind Image data
Dataset Size 35.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image1
# 6086
Dataset Kind Image data
Dataset Size 39.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image2
# 6087
Dataset Kind Image data
Dataset Size 35.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image3
# 6088
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image4
# 6089
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image5
# 6090
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image6
# 6091
Dataset Kind Image data
Dataset Size 30.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image7
# 6092
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image8
# 6093
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image9
# 6094
Dataset Kind Image data
Dataset Size 29.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image10
# 6095
Dataset Kind Image data
Dataset Size 27.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image11
# 6096
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image12
# 6097
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image13
# 6098
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image14
# 6099
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image15
# 6100
Dataset Kind Image data
Dataset Size 28.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image16
# 6101
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image17
# 6102
Dataset Kind Image data
Dataset Size 27.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image18
# 6103
Dataset Kind Image data
Dataset Size 35.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image19
# 6104
Dataset Kind Image data
Dataset Size 44.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image20
# 6105
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image21
# 6106
Dataset Kind Image data
Dataset Size 36.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image23
# 6107
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image24
# 6108
Dataset Kind Image data
Dataset Size 36.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image25
# 6109
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS4C_180221_Rec8fnc_cl_image26
# 6110
Dataset Kind Image data
Dataset Size 35.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data