Summary of 120-Ding-CentromericDyn


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
Timelapse images and BDML file for quantitative information about the centromeric dynamics during mouse oocytes meiosis
Description
-
Release date
2021-09-30
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
351 ( Image datasets: 351, Quantitative data datasets: 0 )
Size of Datasets
720.8 GB ( Image datasets: 720.8 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Gene symbol(s)
Rec8, Sgo2, Smc3
Protein name(s)
ACA, ACA-C, AKA, CENP-C, H2B, PIAS, PIAS1, PIAS2, PIAS3, PIAS4, PP2A, SUMO1, SUMO2, SUMO2/3, SUMO3
Protein tag(s)
B56-mNG, SunTag, mCherry, mEGFP

Datatype
-
Molecular Function (MF)
-
Biological Process (BP)
meiotic cell cycle, centromeric sister chromatid cohesion
Cellular Component (CC)
chromosome, kinetochore
Biological Imaging Method
time lapse microscopy, fluorescence microscopy
X scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Y scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Z scale
1 micrometer/slice, 2.6 micrometer/slice, 2.5 micrometer/slice, 0.5 micrometer/slice, 3.9085 micrometer/slice, 1 micrometer/slice, 0.25 micrometer/slice, 1.2 micrometer/slice, 0.7 micrometer/slice, 0.8 micrometer/slice, 2.7 micrometer/slice, 1.5 micrometer/slice
T scale
2 minutes for each time interval, NA , 10 minutes for each time interval, 6 minutes for each time interval, 7 minutes for each time interval, 15 minutes for each time interval, 20 minutes for each time interval, 4 minutes for each time interval, 3 minutes for each time interval, NA

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Yi Ding, Masako Kaido, Elena Llano, Alberto M Pendas, Tomoya S Kitajima (2018) The Post-anaphase SUMO Pathway Ensures the Maintenance of Centromeric Cohesion through Meiosis I-II Transition in Mammalian Oocytes., Current biology : CB, Volume 28, Number 10, pp. 1661-1669.e4

Published in 2018 May 21 (Electronic publication in May 10, 2018, midnight )

(Abstract) The production of haploid gametes requires the maintenance of centromeric cohesion between sister chromatids through the transition between two successive meiotic divisions, meiosis I and meiosis II. One mechanism for the cohesion maintenance is shugoshin-dependent protection of centromeric cohesin at anaphase I onset [1-3]. However, how centromeric cohesion is maintained during late anaphase I and telophase I, when centromeric shugoshin is undetectable [1-3], remains largely unexplored. Here we show that the centromeric small ubiquitin-related modifier (SUMO) pathway is critical for the maintenance of centromeric cohesion during post-anaphase-I periods in mouse oocytes. SUMO2/3 and E3 ligase PIAS are enriched near centromeres during late anaphase I and telophase I. Specific perturbation of the centromeric SUMO pathway results in precocious loss of centromeric cohesin at telophase I, although shugoshin-dependent centromeric protection at anaphase I onset remains largely intact. Prevention of the SUMO perturbation during post-anaphase-I periods restores the maintenance of centromeric cohesion through the meiosis I-II transition. Thus, the post-anaphase-I centromeric SUMO pathway ensures continuous maintenance of centromeric cohesion through the meiosis I-II transition.
(MeSH Terms)

Contact
Tomoya S. Kitajima , RIKEN , Center for Biosystems Dynamics Research , Laboratory for Chromosome Segregation
Contributors

Dataset List of 120-Ding-CentromericDyn

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset FigS3A_180213_pias1cenpc_image9
# 5961
Dataset Kind Image data
Dataset Size 8.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_180213_pias1cenpc_image10
# 5962
Dataset Kind Image data
Dataset Size 63.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_180213_pias1cenpc_image11
# 5963
Dataset Kind Image data
Dataset Size 157.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_180213_pias1cenpc_image12
# 5964
Dataset Kind Image data
Dataset Size 153.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3A_180213_pias1cenpc_image23
# 5965
Dataset Kind Image data
Dataset Size 74.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3B_170723_control_12oocytes
# 5966
Dataset Kind Image data
Dataset Size 497.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3B_170723_control11
# 5967
Dataset Kind Image data
Dataset Size 105.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3B_170723_pias-cenpc_5oocytes
# 5968
Dataset Kind Image data
Dataset Size 195.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3B_170723_pias-DN-cenpc_7oocytes
# 5969
Dataset Kind Image data
Dataset Size 231.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3B_170723_pias-DN-cenpc_13oocytes
# 5970
Dataset Kind Image data
Dataset Size 475.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_cenpc_image1
# 5971
Dataset Kind Image data
Dataset Size 11.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_cenpc_image2
# 5972
Dataset Kind Image data
Dataset Size 10.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_cenpc_image3
# 5973
Dataset Kind Image data
Dataset Size 8.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_cenpc_image4
# 5974
Dataset Kind Image data
Dataset Size 9.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_cenpc_image5
# 5975
Dataset Kind Image data
Dataset Size 8.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_cenpc_image6
# 5976
Dataset Kind Image data
Dataset Size 9.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_pias-cenpc_image7
# 5977
Dataset Kind Image data
Dataset Size 12.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_pias-cenpc_image8
# 5978
Dataset Kind Image data
Dataset Size 12.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_piasdn-cenpc_image9
# 5979
Dataset Kind Image data
Dataset Size 12.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_piasdn-cenpc_image10
# 5980
Dataset Kind Image data
Dataset Size 12.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_piasdn-cenpc_image11
# 5981
Dataset Kind Image data
Dataset Size 8.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_piasdn-cenpc_image12
# 5982
Dataset Kind Image data
Dataset Size 10.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_piasdn-cenpc_image13-19
# 5983
Dataset Kind Image data
Dataset Size 64.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_piasdn-cenpc_image20
# 5984
Dataset Kind Image data
Dataset Size 9.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_piasdn-cenpc_image21-25
# 5985
Dataset Kind Image data
Dataset Size 49.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_piasdn-cenpc_image26
# 5986
Dataset Kind Image data
Dataset Size 11.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_piasdn-cenpc_image27-29
# 5987
Dataset Kind Image data
Dataset Size 28.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_piasdn-cenpc_image30
# 5988
Dataset Kind Image data
Dataset Size 9.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3C_180111_MII_piasdn-cenpc_image31
# 5989
Dataset Kind Image data
Dataset Size 14.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_180212_image1-2
# 5990
Dataset Kind Image data
Dataset Size 34.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_180212_image3
# 5991
Dataset Kind Image data
Dataset Size 26.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_180212_image4
# 5992
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_180212_image5-9
# 5993
Dataset Kind Image data
Dataset Size 140.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_180212_image10
# 5994
Dataset Kind Image data
Dataset Size 29.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_180212_image11
# 5995
Dataset Kind Image data
Dataset Size 28.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_180212_image12-23
# 5996
Dataset Kind Image data
Dataset Size 371.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plus--image27
# 5997
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plus--image28
# 5998
Dataset Kind Image data
Dataset Size 48.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plus--image29
# 5999
Dataset Kind Image data
Dataset Size 52.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plus--image30
# 6000
Dataset Kind Image data
Dataset Size 46.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plus--image31
# 6001
Dataset Kind Image data
Dataset Size 60.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plus--image52
# 6002
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plus--image53
# 6003
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plus--image54-55
# 6004
Dataset Kind Image data
Dataset Size 44.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plus--image56
# 6005
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plus--image57
# 6006
Dataset Kind Image data
Dataset Size 17.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplus-image32
# 6007
Dataset Kind Image data
Dataset Size 51.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplus-image33
# 6008
Dataset Kind Image data
Dataset Size 52.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplus-image34
# 6009
Dataset Kind Image data
Dataset Size 45.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS3D_bl6_Sgo2plusplus-image35
# 6010
Dataset Kind Image data
Dataset Size 51.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data