Summary of 120-Ding-CentromericDyn


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
Timelapse images and BDML file for quantitative information about the centromeric dynamics during mouse oocytes meiosis
Description
-
Release date
2021-09-30
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
351 ( Image datasets: 351, Quantitative data datasets: 0 )
Size of Datasets
720.8 GB ( Image datasets: 720.8 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Gene symbol(s)
Rec8, Sgo2, Smc3
Protein name(s)
ACA, ACA-C, AKA, CENP-C, H2B, PIAS, PIAS1, PIAS2, PIAS3, PIAS4, PP2A, SUMO1, SUMO2, SUMO2/3, SUMO3
Protein tag(s)
B56-mNG, SunTag, mCherry, mEGFP

Datatype
-
Molecular Function (MF)
-
Biological Process (BP)
meiotic cell cycle, centromeric sister chromatid cohesion
Cellular Component (CC)
chromosome, kinetochore
Biological Imaging Method
time lapse microscopy, fluorescence microscopy
X scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Y scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Z scale
1 micrometer/slice, 2.6 micrometer/slice, 2.5 micrometer/slice, 0.5 micrometer/slice, 3.9085 micrometer/slice, 1 micrometer/slice, 0.25 micrometer/slice, 1.2 micrometer/slice, 0.7 micrometer/slice, 0.8 micrometer/slice, 2.7 micrometer/slice, 1.5 micrometer/slice
T scale
2 minutes for each time interval, NA , 10 minutes for each time interval, 6 minutes for each time interval, 7 minutes for each time interval, 15 minutes for each time interval, 20 minutes for each time interval, 4 minutes for each time interval, 3 minutes for each time interval, NA

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Yi Ding, Masako Kaido, Elena Llano, Alberto M Pendas, Tomoya S Kitajima (2018) The Post-anaphase SUMO Pathway Ensures the Maintenance of Centromeric Cohesion through Meiosis I-II Transition in Mammalian Oocytes., Current biology : CB, Volume 28, Number 10, pp. 1661-1669.e4

Published in 2018 May 21 (Electronic publication in May 10, 2018, midnight )

(Abstract) The production of haploid gametes requires the maintenance of centromeric cohesion between sister chromatids through the transition between two successive meiotic divisions, meiosis I and meiosis II. One mechanism for the cohesion maintenance is shugoshin-dependent protection of centromeric cohesin at anaphase I onset [1-3]. However, how centromeric cohesion is maintained during late anaphase I and telophase I, when centromeric shugoshin is undetectable [1-3], remains largely unexplored. Here we show that the centromeric small ubiquitin-related modifier (SUMO) pathway is critical for the maintenance of centromeric cohesion during post-anaphase-I periods in mouse oocytes. SUMO2/3 and E3 ligase PIAS are enriched near centromeres during late anaphase I and telophase I. Specific perturbation of the centromeric SUMO pathway results in precocious loss of centromeric cohesin at telophase I, although shugoshin-dependent centromeric protection at anaphase I onset remains largely intact. Prevention of the SUMO perturbation during post-anaphase-I periods restores the maintenance of centromeric cohesion through the meiosis I-II transition. Thus, the post-anaphase-I centromeric SUMO pathway ensures continuous maintenance of centromeric cohesion through the meiosis I-II transition.
(MeSH Terms)

Contact
Tomoya S. Kitajima , RIKEN , Center for Biosystems Dynamics Research , Laboratory for Chromosome Segregation
Contributors

Dataset List of 120-Ding-CentromericDyn

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_dn_image32
# 5861
Dataset Kind Image data
Dataset Size 34.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_dn_image33
# 5862
Dataset Kind Image data
Dataset Size 19.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_dn_image34
# 5863
Dataset Kind Image data
Dataset Size 24.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_dn_image35
# 5864
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_image23
# 5865
Dataset Kind Image data
Dataset Size 16.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_image24
# 5866
Dataset Kind Image data
Dataset Size 21.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_image25
# 5867
Dataset Kind Image data
Dataset Size 22.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_image26
# 5868
Dataset Kind Image data
Dataset Size 19.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_image27
# 5869
Dataset Kind Image data
Dataset Size 15.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_image42
# 5870
Dataset Kind Image data
Dataset Size 36.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3C_160911_PIASdn_cenpc
# 5871
Dataset Kind Image data
Dataset Size 76.5 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3C_160913_cenpc_Sgo2--
# 5872
Dataset Kind Image data
Dataset Size 9.6 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3C_160917_cenpc_1_Sgo2
# 5873
Dataset Kind Image data
Dataset Size 62.0 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3C_160917_cenpc_2_Sgo2
# 5874
Dataset Kind Image data
Dataset Size 783.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3C_160922_cenpc_Sgo2--
# 5875
Dataset Kind Image data
Dataset Size 22.9 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4A-C_160623_rec8f_cenpc
# 5876
Dataset Kind Image data
Dataset Size 15.4 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4A-C_160623_rec8f_cenpc_mut
# 5877
Dataset Kind Image data
Dataset Size 8.7 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4A-C_160628_rec8f_cenpc
# 5878
Dataset Kind Image data
Dataset Size 21.3 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4A-C_160628_rec8f_cenpc_mut
# 5879
Dataset Kind Image data
Dataset Size 18.5 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4A-C_160628_rec8f_MII
# 5880
Dataset Kind Image data
Dataset Size 44.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4A-C_160701_rec8f_cenpc
# 5881
Dataset Kind Image data
Dataset Size 17.5 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4A-C_160701_rec8f_cenpc_mut
# 5882
Dataset Kind Image data
Dataset Size 16.9 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4A-C_160701_rec8f_MII_cenpc
# 5883
Dataset Kind Image data
Dataset Size 778.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4A-C_160701_rec8f_MII_cenpc_mut
# 5884
Dataset Kind Image data
Dataset Size 793.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8f_cl_image79
# 5885
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8f_cl_image80
# 5886
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8f_cl_image81
# 5887
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8f_cl_image83
# 5888
Dataset Kind Image data
Dataset Size 28.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8f_cl_image85
# 5889
Dataset Kind Image data
Dataset Size 29.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8f_cl_image86
# 5890
Dataset Kind Image data
Dataset Size 29.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8f_cl_image87-106
# 5891
Dataset Kind Image data
Dataset Size 671.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8fnc_mut_image59-78
# 5892
Dataset Kind Image data
Dataset Size 415.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8fnc_mut_image60
# 5893
Dataset Kind Image data
Dataset Size 32.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8fnc_mut_image63
# 5894
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8fnc_mut_image64
# 5895
Dataset Kind Image data
Dataset Size 37.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8fnc_mut_image67
# 5896
Dataset Kind Image data
Dataset Size 41.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8fnc_mut_image69
# 5897
Dataset Kind Image data
Dataset Size 35.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4D_Recc8fnc_mut_image70
# 5898
Dataset Kind Image data
Dataset Size 34.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4A-C_160701_MetaII_mut
# 5899
Dataset Kind Image data
Dataset Size 793.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig4A-C_160701_MetaII_WT
# 5900
Dataset Kind Image data
Dataset Size 778.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1A_140722_mEGFP-PIAS
# 5901
Dataset Kind Image data
Dataset Size 4.7 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1A_140722_mEGFP-PIAS2
# 5902
Dataset Kind Image data
Dataset Size 4.7 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1A_140722_mEGFP-PIAS3
# 5903
Dataset Kind Image data
Dataset Size 4.7 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1A_140722_mEGFP-PIAS4
# 5904
Dataset Kind Image data
Dataset Size 4.7 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1B_160420_aca_sgo2_sumo23_DNA_1
# 5905
Dataset Kind Image data
Dataset Size 262.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1B_160420_aca_sgo2_sumo23_DNA_2
# 5906
Dataset Kind Image data
Dataset Size 316.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1C_170803_SUMO2ga_1
# 5907
Dataset Kind Image data
Dataset Size 2.4 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1C_170803_SUMO2ga_2
# 5908
Dataset Kind Image data
Dataset Size 326.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1C_170803_SUMO2gg_1
# 5909
Dataset Kind Image data
Dataset Size 4.7 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset FigS1C_170803_SUMO2gg_2
# 5910
Dataset Kind Image data
Dataset Size 652.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data