Summary of 120-Ding-CentromericDyn


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
Timelapse images and BDML file for quantitative information about the centromeric dynamics during mouse oocytes meiosis
Description
-
Release date
2021-09-30
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
351 ( Image datasets: 351, Quantitative data datasets: 0 )
Size of Datasets
720.8 GB ( Image datasets: 720.8 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Gene symbol(s)
Rec8, Sgo2, Smc3
Protein name(s)
ACA, ACA-C, AKA, CENP-C, H2B, PIAS, PIAS1, PIAS2, PIAS3, PIAS4, PP2A, SUMO1, SUMO2, SUMO2/3, SUMO3
Protein tag(s)
B56-mNG, SunTag, mCherry, mEGFP

Datatype
-
Molecular Function (MF)
-
Biological Process (BP)
meiotic cell cycle, centromeric sister chromatid cohesion
Cellular Component (CC)
chromosome, kinetochore
Biological Imaging Method
time lapse microscopy, fluorescence microscopy
X scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Y scale
0.0648645 micrometer/pixel, 0.0922518 micrometer/pixel, 0.0691888 micrometer/pixel, 0.0759100 micrometer/pixel, 0.0518916 micrometer/pixel, 0.1277332 micrometer/pixel, 0.0593047 micrometer/pixel , 0.0657311 micrometer/pixel, 0.1186094 micrometer/pixel, 0.1660532 micrometer/pixel, 0.0501293 micrometer/pixel, 0.0478712 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0937161 micrometer/pixel, 0.0461259 micrometer/pixel, 0.1383776 micrometer/pixel, 0.0593047 micrometer/pixel, 0.0370654 micrometer/pixel, 0.0830266 micrometer/pixel, 0.0357873 micrometer/pixel, 0.0852922 micrometer/pixel, 0.1006383 micrometer/pixel, 0.0415133 micrometer/pixel, 0.0446379 micrometer/pixel, 0.1339138 micrometer/pixel, 0.0590080 micrometer/pixel
Z scale
1 micrometer/slice, 2.6 micrometer/slice, 2.5 micrometer/slice, 0.5 micrometer/slice, 3.9085 micrometer/slice, 1 micrometer/slice, 0.25 micrometer/slice, 1.2 micrometer/slice, 0.7 micrometer/slice, 0.8 micrometer/slice, 2.7 micrometer/slice, 1.5 micrometer/slice
T scale
2 minutes for each time interval, NA , 10 minutes for each time interval, 6 minutes for each time interval, 7 minutes for each time interval, 15 minutes for each time interval, 20 minutes for each time interval, 4 minutes for each time interval, 3 minutes for each time interval, NA

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Yi Ding, Masako Kaido, Elena Llano, Alberto M Pendas, Tomoya S Kitajima (2018) The Post-anaphase SUMO Pathway Ensures the Maintenance of Centromeric Cohesion through Meiosis I-II Transition in Mammalian Oocytes., Current biology : CB, Volume 28, Number 10, pp. 1661-1669.e4

Published in 2018 May 21 (Electronic publication in May 10, 2018, midnight )

(Abstract) The production of haploid gametes requires the maintenance of centromeric cohesion between sister chromatids through the transition between two successive meiotic divisions, meiosis I and meiosis II. One mechanism for the cohesion maintenance is shugoshin-dependent protection of centromeric cohesin at anaphase I onset [1-3]. However, how centromeric cohesion is maintained during late anaphase I and telophase I, when centromeric shugoshin is undetectable [1-3], remains largely unexplored. Here we show that the centromeric small ubiquitin-related modifier (SUMO) pathway is critical for the maintenance of centromeric cohesion during post-anaphase-I periods in mouse oocytes. SUMO2/3 and E3 ligase PIAS are enriched near centromeres during late anaphase I and telophase I. Specific perturbation of the centromeric SUMO pathway results in precocious loss of centromeric cohesin at telophase I, although shugoshin-dependent centromeric protection at anaphase I onset remains largely intact. Prevention of the SUMO perturbation during post-anaphase-I periods restores the maintenance of centromeric cohesion through the meiosis I-II transition. Thus, the post-anaphase-I centromeric SUMO pathway ensures continuous maintenance of centromeric cohesion through the meiosis I-II transition.
(MeSH Terms)

Contact
Tomoya S. Kitajima , RIKEN , Center for Biosystems Dynamics Research , Laboratory for Chromosome Segregation
Contributors

Dataset List of 120-Ding-CentromericDyn

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset Fig2D_170301_control_cenpc_image3
# 5811
Dataset Kind Image data
Dataset Size 38.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_control_cenpc_image17
# 5812
Dataset Kind Image data
Dataset Size 756.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_control_cenpc_image17
# 5813
Dataset Kind Image data
Dataset Size 756.5 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_control_cenpc_image18-27
# 5814
Dataset Kind Image data
Dataset Size 1.9 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_control_cenpc_image48
# 5815
Dataset Kind Image data
Dataset Size 153.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1-cenpc_image47
# 5816
Dataset Kind Image data
Dataset Size 466.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image1
# 5817
Dataset Kind Image data
Dataset Size 313.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image2
# 5818
Dataset Kind Image data
Dataset Size 313.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image3
# 5819
Dataset Kind Image data
Dataset Size 201.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image4
# 5820
Dataset Kind Image data
Dataset Size 265.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image5
# 5821
Dataset Kind Image data
Dataset Size 169.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image6
# 5822
Dataset Kind Image data
Dataset Size 354.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image7
# 5823
Dataset Kind Image data
Dataset Size 346.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image9
# 5824
Dataset Kind Image data
Dataset Size 603.6 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image10
# 5825
Dataset Kind Image data
Dataset Size 635.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image11
# 5826
Dataset Kind Image data
Dataset Size 692.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image12
# 5827
Dataset Kind Image data
Dataset Size 185.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image14-16
# 5828
Dataset Kind Image data
Dataset Size 1.7 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_interKT_pias1dn-cenpc_image49
# 5829
Dataset Kind Image data
Dataset Size 305.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_pias1-cenpc_image2
# 5830
Dataset Kind Image data
Dataset Size 48.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_pias1-cenpc_image6
# 5831
Dataset Kind Image data
Dataset Size 18.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_pias1-cenpc_image15
# 5832
Dataset Kind Image data
Dataset Size 40.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_pias1-cenpc_image46
# 5833
Dataset Kind Image data
Dataset Size 846.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_pias1-cenpc_image47
# 5834
Dataset Kind Image data
Dataset Size 466.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_pias1dn-cenpc_image1
# 5835
Dataset Kind Image data
Dataset Size 313.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_pias1dn-cenpc_image2
# 5836
Dataset Kind Image data
Dataset Size 313.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_pias1dn-cenpc_image6
# 5837
Dataset Kind Image data
Dataset Size 354.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2D_170301_pias1dn-cenpc_image11
# 5838
Dataset Kind Image data
Dataset Size 692.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2E_160624_control
# 5839
Dataset Kind Image data
Dataset Size 832.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2E_160624_test1
# 5840
Datast ID Fig2E_160624_test1
Dataset Kind Image data
Dataset Size 1.5 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig2E_160624_test2
# 5841
Datast ID Fig2E_160624_test2
Dataset Kind Image data
Dataset Size 1.2 GB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3A_170313_hetrosgo2
# 5842
Dataset Kind Image data
Dataset Size 586.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3A_170313_sgo2plusplus
# 5843
Dataset Kind Image data
Dataset Size 285.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3A_170313_sgo2plusplus_pias1-cenpc
# 5844
Dataset Kind Image data
Dataset Size 468.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusneg_image1
# 5845
Dataset Kind Image data
Dataset Size 15.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusneg_image2
# 5846
Dataset Kind Image data
Dataset Size 21.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusneg_image3
# 5847
Dataset Kind Image data
Dataset Size 15.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusneg_image4
# 5848
Dataset Kind Image data
Dataset Size 19.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusneg_image5
# 5849
Dataset Kind Image data
Dataset Size 20.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusneg_image6
# 5850
Dataset Kind Image data
Dataset Size 16.9 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusneg_image7
# 5851
Dataset Kind Image data
Dataset Size 21.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusneg_image8
# 5852
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusneg_image9
# 5853
Dataset Kind Image data
Dataset Size 19.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusneg_image10
# 5854
Dataset Kind Image data
Dataset Size 21.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusneg_image11
# 5855
Dataset Kind Image data
Dataset Size 21.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusneg_image12-44
# 5856
Dataset Kind Image data
Dataset Size 225.3 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_dn_image28
# 5857
Dataset Kind Image data
Dataset Size 24.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_dn_image29
# 5858
Dataset Kind Image data
Dataset Size 28.4 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_dn_image30
# 5859
Dataset Kind Image data
Dataset Size 21.1 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig3B_170315_Sgo2plusplus_dn_image31
# 5860
Dataset Kind Image data
Dataset Size 46.2 MB
4D view
SSBD:OMERO
Download BDML
Download Image data