Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_70
# 1679
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_71
# 1680
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_72
# 1681
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_73
# 1682
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_74
# 1683
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_75
# 1684
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_76
# 1685
Dataset Kind Image data
Dataset Size 3.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_77
# 1686
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_78
# 1687
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_79
# 1688
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_80
# 1689
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_81
# 1690
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_82
# 1691
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_83
# 1692
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_84
# 1693
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_85
# 1694
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_86
# 1695
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_87
# 1696
Dataset Kind Image data
Dataset Size 3.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_88
# 1697
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_89
# 1698
Dataset Kind Image data
Dataset Size 551.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_1
# 1699
Datast ID Fig2EF-S2E-S2H_1
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_2
# 1700
Datast ID Fig2EF-S2E-S2H_2
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_3
# 1701
Datast ID Fig2EF-S2E-S2H_3
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_4
# 1702
Datast ID Fig2EF-S2E-S2H_4
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_5
# 1703
Datast ID Fig2EF-S2E-S2H_5
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_6
# 1704
Datast ID Fig2EF-S2E-S2H_6
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_7
# 1705
Datast ID Fig2EF-S2E-S2H_7
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_8
# 1706
Datast ID Fig2EF-S2E-S2H_8
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_9
# 1707
Datast ID Fig2EF-S2E-S2H_9
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_10
# 1708
Datast ID Fig2EF-S2E-S2H_10
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_11
# 1709
Datast ID Fig2EF-S2E-S2H_11
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_12
# 1710
Datast ID Fig2EF-S2E-S2H_12
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_13
# 1711
Datast ID Fig2EF-S2E-S2H_13
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_14
# 1712
Datast ID Fig2EF-S2E-S2H_14
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_15
# 1713
Datast ID Fig2EF-S2E-S2H_15
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_16
# 1714
Datast ID Fig2EF-S2E-S2H_16
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_17
# 1715
Datast ID Fig2EF-S2E-S2H_17
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_18
# 1716
Datast ID Fig2EF-S2E-S2H_18
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_19
# 1717
Datast ID Fig2EF-S2E-S2H_19
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_20
# 1718
Datast ID Fig2EF-S2E-S2H_20
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_21
# 1719
Datast ID Fig2EF-S2E-S2H_21
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_22
# 1720
Datast ID Fig2EF-S2E-S2H_22
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_23
# 1721
Datast ID Fig2EF-S2E-S2H_23
Dataset Kind Image data
Dataset Size 27.7 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_24
# 1722
Datast ID Fig2EF-S2E-S2H_24
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_25
# 1723
Datast ID Fig2EF-S2E-S2H_25
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_26
# 1724
Datast ID Fig2EF-S2E-S2H_26
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_27
# 1725
Datast ID Fig2EF-S2E-S2H_27
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_28
# 1726
Datast ID Fig2EF-S2E-S2H_28
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_29
# 1727
Datast ID Fig2EF-S2E-S2H_29
Dataset Kind Image data
Dataset Size 27.7 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_30
# 1728
Datast ID Fig2EF-S2E-S2H_30
Dataset Kind Image data
Dataset Size 27.7 MB
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SSBD:OMERO
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