Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig3G-3I_12
# 1779
Datast ID Fig3G-3I_12
Dataset Kind Image data
Dataset Size 222.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4A
# 1780
Datast ID Fig4A
Dataset Kind Image data
Dataset Size 18.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4B
# 1781
Datast ID Fig4B
Dataset Kind Image data
Dataset Size 266.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4D_increasedairflow
# 1782
Dataset Kind Image data
Dataset Size 23.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4D_odor
# 1783
Datast ID Fig4D_odor
Dataset Kind Image data
Dataset Size 23.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_1
# 1784
Datast ID Fig4E-G-S3H_1
Dataset Kind Image data
Dataset Size 31.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_1_
# 1785
Datast ID Fig4E-G-S3H_1_
Dataset Kind Image data
Dataset Size 31.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_2
# 1786
Datast ID Fig4E-G-S3H_2
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_2_
# 1787
Datast ID Fig4E-G-S3H_2_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_3
# 1788
Datast ID Fig4E-G-S3H_3
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_3_
# 1789
Datast ID Fig4E-G-S3H_3_
Dataset Kind Image data
Dataset Size 31.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_4
# 1790
Datast ID Fig4E-G-S3H_4
Dataset Kind Image data
Dataset Size 32.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_4_
# 1791
Datast ID Fig4E-G-S3H_4_
Dataset Kind Image data
Dataset Size 32.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_5
# 1792
Datast ID Fig4E-G-S3H_5
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_5_
# 1793
Datast ID Fig4E-G-S3H_5_
Dataset Kind Image data
Dataset Size 32.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_6
# 1794
Datast ID Fig4E-G-S3H_6
Dataset Kind Image data
Dataset Size 32.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_6_
# 1795
Datast ID Fig4E-G-S3H_6_
Dataset Kind Image data
Dataset Size 32.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_7
# 1796
Datast ID Fig4E-G-S3H_7
Dataset Kind Image data
Dataset Size 32.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_7_
# 1797
Datast ID Fig4E-G-S3H_7_
Dataset Kind Image data
Dataset Size 32.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_8
# 1798
Datast ID Fig4E-G-S3H_8
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_8_
# 1799
Datast ID Fig4E-G-S3H_8_
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_9
# 1800
Datast ID Fig4E-G-S3H_9
Dataset Kind Image data
Dataset Size 33.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_9_
# 1801
Datast ID Fig4E-G-S3H_9_
Dataset Kind Image data
Dataset Size 33.2 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_10
# 1802
Datast ID Fig4E-G-S3H_10
Dataset Kind Image data
Dataset Size 32.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_10_
# 1803
Datast ID Fig4E-G-S3H_10_
Dataset Kind Image data
Dataset Size 32.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_11
# 1804
Datast ID Fig4E-G-S3H_11
Dataset Kind Image data
Dataset Size 32.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_11_
# 1805
Datast ID Fig4E-G-S3H_11_
Dataset Kind Image data
Dataset Size 32.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_12
# 1806
Datast ID Fig4E-G-S3H_12
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_12_
# 1807
Datast ID Fig4E-G-S3H_12_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_13
# 1808
Datast ID Fig4E-G-S3H_13
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_13_
# 1809
Datast ID Fig4E-G-S3H_13_
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_14
# 1810
Datast ID Fig4E-G-S3H_14
Dataset Kind Image data
Dataset Size 32.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_14_
# 1811
Datast ID Fig4E-G-S3H_14_
Dataset Kind Image data
Dataset Size 32.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_15
# 1812
Datast ID Fig4E-G-S3H_15
Dataset Kind Image data
Dataset Size 31.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_15_
# 1813
Datast ID Fig4E-G-S3H_15_
Dataset Kind Image data
Dataset Size 31.0 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_16
# 1814
Datast ID Fig4E-G-S3H_16
Dataset Kind Image data
Dataset Size 26.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_16_
# 1815
Datast ID Fig4E-G-S3H_16_
Dataset Kind Image data
Dataset Size 26.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_17
# 1816
Datast ID Fig4E-G-S3H_17
Dataset Kind Image data
Dataset Size 32.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_17_
# 1817
Datast ID Fig4E-G-S3H_17_
Dataset Kind Image data
Dataset Size 32.1 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_18
# 1818
Datast ID Fig4E-G-S3H_18
Dataset Kind Image data
Dataset Size 32.3 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_18_
# 1819
Datast ID Fig4E-G-S3H_18_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_19
# 1820
Datast ID Fig4E-G-S3H_19
Dataset Kind Image data
Dataset Size 32.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_19_
# 1821
Datast ID Fig4E-G-S3H_19_
Dataset Kind Image data
Dataset Size 32.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_20
# 1822
Datast ID Fig4E-G-S3H_20
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_20_
# 1823
Datast ID Fig4E-G-S3H_20_
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_21
# 1824
Datast ID Fig4E-G-S3H_21
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_21_
# 1825
Datast ID Fig4E-G-S3H_21_
Dataset Kind Image data
Dataset Size 31.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_22
# 1826
Datast ID Fig4E-G-S3H_22
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_22_
# 1827
Datast ID Fig4E-G-S3H_22_
Dataset Kind Image data
Dataset Size 33.6 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig4E-G-S3H_23
# 1828
Datast ID Fig4E-G-S3H_23
Dataset Kind Image data
Dataset Size 32.3 MB
4D view
SSBD:OMERO
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