Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

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#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_31
# 1729
Datast ID Fig2EF-S2E-S2H_31
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_32
# 1730
Datast ID Fig2EF-S2E-S2H_32
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_33
# 1731
Datast ID Fig2EF-S2E-S2H_33
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_34
# 1732
Datast ID Fig2EF-S2E-S2H_34
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_35
# 1733
Datast ID Fig2EF-S2E-S2H_35
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_36
# 1734
Datast ID Fig2EF-S2E-S2H_36
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_37
# 1735
Datast ID Fig2EF-S2E-S2H_37
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_38
# 1736
Datast ID Fig2EF-S2E-S2H_38
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_39
# 1737
Datast ID Fig2EF-S2E-S2H_39
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_40
# 1738
Datast ID Fig2EF-S2E-S2H_40
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_41
# 1739
Datast ID Fig2EF-S2E-S2H_41
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_42
# 1740
Datast ID Fig2EF-S2E-S2H_42
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_43
# 1741
Datast ID Fig2EF-S2E-S2H_43
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_44
# 1742
Datast ID Fig2EF-S2E-S2H_44
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_45
# 1743
Datast ID Fig2EF-S2E-S2H_45
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_46
# 1744
Datast ID Fig2EF-S2E-S2H_46
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_47
# 1745
Datast ID Fig2EF-S2E-S2H_47
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_48
# 1746
Datast ID Fig2EF-S2E-S2H_48
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_49
# 1747
Datast ID Fig2EF-S2E-S2H_49
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_50
# 1748
Datast ID Fig2EF-S2E-S2H_50
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_51
# 1749
Datast ID Fig2EF-S2E-S2H_51
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_52
# 1750
Datast ID Fig2EF-S2E-S2H_52
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_53
# 1751
Datast ID Fig2EF-S2E-S2H_53
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_54
# 1752
Datast ID Fig2EF-S2E-S2H_54
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_55
# 1753
Datast ID Fig2EF-S2E-S2H_55
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_56
# 1754
Datast ID Fig2EF-S2E-S2H_56
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_57
# 1755
Datast ID Fig2EF-S2E-S2H_57
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_58
# 1756
Datast ID Fig2EF-S2E-S2H_58
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_59
# 1757
Datast ID Fig2EF-S2E-S2H_59
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_60
# 1758
Datast ID Fig2EF-S2E-S2H_60
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_61
# 1759
Datast ID Fig2EF-S2E-S2H_61
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_62
# 1760
Datast ID Fig2EF-S2E-S2H_62
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_63
# 1761
Datast ID Fig2EF-S2E-S2H_63
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_64
# 1762
Datast ID Fig2EF-S2E-S2H_64
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_65
# 1763
Datast ID Fig2EF-S2E-S2H_65
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_66
# 1764
Datast ID Fig2EF-S2E-S2H_66
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_67
# 1765
Datast ID Fig2EF-S2E-S2H_67
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2EF-S2E-S2H_68
# 1766
Datast ID Fig2EF-S2E-S2H_68
Dataset Kind Image data
Dataset Size 27.7 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig3A-3C
# 1767
Datast ID Fig3A-3C
Dataset Kind Image data
Dataset Size 68.5 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig3G-3I_1
# 1768
Datast ID Fig3G-3I_1
Dataset Kind Image data
Dataset Size 229.6 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig3G-3I_2
# 1769
Datast ID Fig3G-3I_2
Dataset Kind Image data
Dataset Size 219.8 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig3G-3I_3
# 1770
Datast ID Fig3G-3I_3
Dataset Kind Image data
Dataset Size 218.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig3G-3I_4
# 1771
Datast ID Fig3G-3I_4
Dataset Kind Image data
Dataset Size 226.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig3G-3I_5
# 1772
Datast ID Fig3G-3I_5
Dataset Kind Image data
Dataset Size 219.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig3G-3I_6
# 1773
Datast ID Fig3G-3I_6
Dataset Kind Image data
Dataset Size 212.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig3G-3I_7
# 1774
Datast ID Fig3G-3I_7
Dataset Kind Image data
Dataset Size 218.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig3G-3I_8
# 1775
Datast ID Fig3G-3I_8
Dataset Kind Image data
Dataset Size 217.9 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig3G-3I_9
# 1776
Datast ID Fig3G-3I_9
Dataset Kind Image data
Dataset Size 196.9 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig3G-3I_10
# 1777
Datast ID Fig3G-3I_10
Dataset Kind Image data
Dataset Size 218.2 MB
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SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig3G-3I_11
# 1778
Datast ID Fig3G-3I_11
Dataset Kind Image data
Dataset Size 228.4 MB
4D view
SSBD:OMERO
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