Summary of 66-Iwata-CellDynOSNMT


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Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
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Thumbnail Thumbnail for dataset Fig1E_posterior3_100_1
# 1579
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior3_100_2
# 1580
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior3_100_3
# 1581
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior3_100_4
# 1582
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior3_200_1
# 1583
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior3_200_2
# 1584
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior3_200_3
# 1585
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior3_200_4
# 1586
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior3_300_1
# 1587
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior3_300_2
# 1588
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior3_300_3
# 1589
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior3_300_4
# 1590
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_50_1
# 1591
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_50_2
# 1592
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_50_3
# 1593
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_50_4
# 1594
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_100_1
# 1595
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_posterior4_100_2
# 1596
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_posterior4_100_3
# 1597
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_100_4
# 1598
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_200_1
# 1599
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_200_2
# 1600
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_200_3
# 1601
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_200_4
# 1602
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_300_1
# 1603
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_300_2
# 1604
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_300_3
# 1605
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_posterior4_300_4
# 1606
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2B_1
# 1607
Datast ID Fig2B_1
Dataset Kind Image data
Dataset Size 51.8 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2B_2
# 1608
Datast ID Fig2B_2
Dataset Kind Image data
Dataset Size 49.3 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2C
# 1609
Datast ID Fig2C
Dataset Kind Image data
Dataset Size 99.0 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_1
# 1610
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_2
# 1611
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_3
# 1612
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_4
# 1613
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_5
# 1614
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_6
# 1615
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_7
# 1616
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_8
# 1617
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_9
# 1618
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_10
# 1619
Dataset Kind Image data
Dataset Size 3.9 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_11
# 1620
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_12
# 1621
Dataset Kind Image data
Dataset Size 968.0 KB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_13
# 1622
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_14
# 1623
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_15
# 1624
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_16
# 1625
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_17
# 1626
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_18
# 1627
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig2D_timecontroller_19
# 1628
Dataset Kind Image data
Dataset Size 3.4 MB
4D view
SSBD:OMERO
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