Summary of 66-Iwata-CellDynOSNMT


SSBD:database
SSBD:database URL

SSBD:repository
SSBD:repository URL

Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Thumbnail Thumbnail for dataset Fig1E_anterior1_50_1
# 1479
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_50_2
# 1480
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_50_3
# 1481
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_50_4
# 1482
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_100_1
# 1483
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_100_2
# 1484
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_100_3
# 1485
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_100_4
# 1486
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_200_1
# 1487
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_200_2
# 1488
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_200_3
# 1489
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_200_4
# 1490
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_300_1
# 1491
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_300_2
# 1492
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_300_3
# 1493
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior1_300_4
# 1494
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_50_1
# 1495
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_50_2
# 1496
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_50_3
# 1497
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_50_4
# 1498
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_100_1
# 1499
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_100_2
# 1500
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_100_3
# 1501
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_100_4
# 1502
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_200_1
# 1503
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_200_2
# 1504
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_200_3
# 1505
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_200_4
# 1506
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_300_1
# 1507
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_300_2
# 1508
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_300_3
# 1509
Dataset Kind Image data
Dataset Size 14.7 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior2_300_4
# 1510
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_50_1
# 1511
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_50_2
# 1512
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_50_3
# 1513
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_50_4
# 1514
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_100_1
# 1515
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_100_2
# 1516
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_100_3
# 1517
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_100_4
# 1518
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_200_1
# 1519
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_200_2
# 1520
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_200_3
# 1521
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_200_4
# 1522
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_300_1
# 1523
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_300_2
# 1524
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_300_3
# 1525
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior3_300_4
# 1526
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior4_50_1
# 1527
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior4_50_2
# 1528
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data