Summary of 66-Iwata-CellDynOSNMT


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SSBD:repository URL

Title
A set of calcium imaging data in the olfactory system of M. musculus adult
Description
-
Release date
2019-11-20
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
2403 ( Image datasets: 2403, Quantitative data datasets: 0 )
Size of Datasets
98.2 GB ( Image datasets: 98.2 GB, Quantitative data datasets: 0 bytes )

Organism(s)
Mus musculus
Protein tag(s)
GCaMP3, GCaMP6f
Reporter(s)
anti-GAD65, anti-GAD67, anti-GFP, anti-NQO1, anti-OMP, anti-Reelin

Datatype
calcium imaging data
Molecular Function (MF)
Biological Process (BP)
neuron cell to cell adhesion
Cellular Component (CC)
axon, dendrite
Biological Imaging Method
-
XYZ Scale
XY: 0.155 micrometer/pixel, Z: NA, XY: 0.0083333 micrometer/pixel, Z: NA, XY: 1 micrometer/pixel, Z: NA, XY: 0.0104167 micrometer/pixel, Z: NA, XY: 1.988 micrometer/pixel, Z: NA, XY: 0.621 micrometer/pixel, Z: NA
T scale
0.64 second for each time interval, 0.11 second for each time interval, 0.04 second for each time interval, 0.43 second for each time interval, 0.05 second for each time interval, 0.06 second for each time interval, 0.12 second for each time interval, 0.14 second for each time interval, NA, 0.03 second for each time interval, 1 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
Olympus FV1000MPE
Detector model
-
Objective model
Olympus XLPLN25XWMP
Filter set
-

Related paper(s)

Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai (2017) Mechanosensory-Based Phase Coding of Odor Identity in the Olfactory Bulb., Neuron, Volume 96, Number 5, pp. 1139-1152.e7

Published in 2017 Dec 6

(Abstract) Mitral and tufted (M/T) cells in the olfactory bulb produce rich temporal patterns of activity in response to different odors. However, it remains unknown how these temporal patterns are generated and how they are utilized in olfaction. Here we show that temporal patterning effectively discriminates between the two sensory modalities detected by olfactory sensory neurons (OSNs): odor and airflow-driven mechanical signals. Sniff-induced mechanosensation generates glomerulus-specific oscillatory activity in M/T cells, whose phase was invariant across airflow speed. In contrast, odor stimulation caused phase shifts (phase coding). We also found that odor-evoked phase shifts are concentration invariant and stable across multiple sniff cycles, contrary to the labile nature of rate coding. The loss of oscillatory mechanosensation impaired the precision and stability of phase coding, demonstrating its role in olfaction. We propose that phase, not rate, coding is a robust encoding strategy of odor identity and is ensured by airflow-induced mechanosensation in OSNs.
(MeSH Terms)

Contact
Takeshi Imai , Kyushu University , Graduate School of Medical Sciences , Department of Developmental Neurophysiology
Contributors
Ryo Iwata, Hiroshi Kiyonari, Takeshi Imai

Dataset List of 66-Iwata-CellDynOSNMT

Thumbnail
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
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Thumbnail Thumbnail for dataset Fig1E_anterior4_50_3
# 1529
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_anterior4_50_4
# 1530
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_anterior4_100_1
# 1531
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_anterior4_100_2
# 1532
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_anterior4_100_3
# 1533
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_anterior4_100_4
# 1534
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_anterior4_200_1
# 1535
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_anterior4_200_2
# 1536
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior4_200_3
# 1537
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior4_200_4
# 1538
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior4_300_1
# 1539
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_anterior4_300_2
# 1540
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior4_300_3
# 1541
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_anterior4_300_4
# 1542
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_50_1
# 1543
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_50_2
# 1544
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_50_3
# 1545
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_50_4
# 1546
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_100_1
# 1547
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_100_2
# 1548
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_100_3
# 1549
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_100_4
# 1550
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_200_1
# 1551
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_200_2
# 1552
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_200_3
# 1553
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_200_4
# 1554
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_300_1
# 1555
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_300_2
# 1556
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_300_3
# 1557
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior1_300_4
# 1558
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_50_1
# 1559
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_50_2
# 1560
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_50_3
# 1561
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_50_4
# 1562
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_posterior2_100_1
# 1563
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_100_2
# 1564
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_posterior2_100_3
# 1565
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_100_4
# 1566
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_200_1
# 1567
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_200_2
# 1568
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_200_3
# 1569
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_200_4
# 1570
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_300_1
# 1571
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_300_2
# 1572
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_300_3
# 1573
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior2_300_4
# 1574
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior3_50_1
# 1575
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior3_50_2
# 1576
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
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Thumbnail Thumbnail for dataset Fig1E_posterior3_50_3
# 1577
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

Thumbnail Thumbnail for dataset Fig1E_posterior3_50_4
# 1578
Dataset Kind Image data
Dataset Size 14.8 MB
4D view
SSBD:OMERO
Download BDML
Download Image data